Reference sequence (1): mardi-ORF1
Identities normalised by aligned length.
Colored by: consensus/70% and property
1 mardi-ORF1     100.0%  NDTHIFLSAVRLLTRMMPTSCIIYLSWESQGAIGTAADAILLARRVNITQFLSAMPSQLRIHCMGHSLGSYVCGSICRQYHSLMSG-ICKGILGINPYEVLFSAPDLYARMHVDTIRLDA 
2 melhe-LORF1     46.9%  NDTEFFLSANRLLTRMIPSAAVVYVSWDPQGAMEPAADAILLARRINVTQFLYAVPSNMGIQCIGHSLGSYVCGSICRQYYYTGKG-RCKRILGINAYEILSTDSSLISRIQSDTIRSDA 
3 aviad-Q9Q9I2    19.0%  MGYQSFRQVLRVHQNMTPAVALLLVDWN----LYYDYDGL----YVDFGKFLSDIPHSKRLHCIGHSAGAHACSTICRQWTYISGDRRCTRIVGLEPTFVTGGLD-----------KNDA 
4 aviad-RTL6      20.4%  LGYDDFRKVLRFHQKMTPAVGVVLVDYR----LYYDTDGL----HADFRKFLVDIPDAKKLHCIGHSAGAHACSTICRQYSQMSKGHRCIRIVGLEPTFVSGGLD-----------KLDA 
  consensus/100%         .shp.Fhps.RhhppMhPsssllhlsap....h..shDul....hhshtpFL.shPpthtlpChGHShGuasCuoICRQa..h.ts.hChtIlGlpsh.l..s.s...........+.DA 
  consensus/90%          .shp.Fhps.RhhppMhPsssllhlsap....h..shDul....hhshtpFL.shPpthtlpChGHShGuasCuoICRQa..h.ts.hChtIlGlpsh.l..s.s...........+.DA 
  consensus/80%          .shp.Fhps.RhhppMhPsssllhlsap....h..shDul....hhshtpFL.shPpthtlpChGHShGuasCuoICRQa..h.ts.hChtIlGlpsh.l..s.s...........+.DA 
  consensus/70%          .shc.FhpslRlhp+MhPusullhVsWc....lhhssDul....+lshspFLsslPssh+lHCIGHShGuasCuoICRQYp.hupG.RCpRIlGlpPh.Vhuuhs...........+.DA 

1 mardi-ORF1     100.0%  EYVAIFATTSQYLSTSDSDADEYIIVNDAVFMNSVCANPYEWNIHLCTTGYGELKSCERFGAANVTTSPGVVEDGSQICLRMLPIIAVLQSLDLKSSYPLLRIAPPDASNEVTHLPSIWN 
2 melhe-LORF1     46.9%  EYVSIFSMGERYIRTVYKDADEYIVAKGISRGVSTCVNPFAWKFSLCTRGVKGREYCENFGANNVTFTSGLREDGSEICERLIPVMAVLQTLDVSSTYALLQLDPKRPSGMTAHISSVWN 
3 aviad-Q9Q9I2    19.0%  DYVAVLKTEGSWITGGYT-ASEDIMLED--KGGRGCGIHGGWSGRVCAESVWGQTVCEEFSWRDTWSKSG--------CFHRLIVPKFLKTLDVRTGLPMFHLL--NEGFKVGPVRSTWN 
4 aviad-RTL6      20.4%  DYVVVLKTQYSWITGGYT-ASEDLMVED--KGGRSCGIHGGWSGRVCGENVWGATVCEEFSWGNTFSLSG--------CYHRMIVPKFLKTLDVKTGLPVFHVL--QEGSRVGPVRSTWN 
  consensus/100%         -YVslhtht.palpss.p.AsE.lhhps..hhspsCs..htWphplCspshht.p.CEpFuhtssh..sG........C.+hh.l.thLpoLDlposhshhpl...p.u..ss.l.ShWN 
  consensus/90%          -YVslhtht.palpss.p.AsE.lhhps..hhspsCs..htWphplCspshht.p.CEpFuhtssh..sG........C.+hh.l.thLpoLDlposhshhpl...p.u..ss.l.ShWN 
  consensus/80%          -YVslhtht.palpss.p.AsE.lhhps..hhspsCs..htWphplCspshht.p.CEpFuhtssh..sG........C.+hh.l.thLpoLDlposhshhpl...p.u..ss.l.ShWN 
  consensus/70%          -YVulhpTptpaIosuYo.AsE.IhlcD..+GspsCu..huWsh+lCscuVhGtpsCEcFuhsNshopSG........Ch+hl.V.thLpTLDV+ouhPlh+lh..ptuscVu.lpSsWN 

1 mardi-ORF1     100.0%  IYVVGKDYRYSTYAKNDSLWYSSAICAGDT---GFSIPSVFTVFAPPSISLRVRAAVQQ--SSTIYKNITIYSAFLKNTSRYYPTVTLETLGPILSAY-----AWRGRMHNSSYYPLPLP 
2 melhe-LORF1     46.9%  VYVLEKDYRYATYAKNEPVWYSTVLSVGPN---GFTPAAVFAVLSRSDTPVIIRDAIQQ--RYSLWGNISMHSAFIEDSPTHFPSIGIRIQSPILGAF-----AWKGRVYSGPRIQIPVP 
3 aviad-Q9Q9I2    19.0%  GYTMSRDYRYASYFNHISISYMTEITYSPVLKQDFVTPIMIIVVASSGSRMFIGGYSEQTLRYGRY-DVLTAVGYTELAEE---VLWIRHWNPSASIYLVYVITPQGFYQDSSSAP-SIK 
4 aviad-RTL6      20.4%  GYTLSRDYRYDSYFNHYSIKYMTEMSYSPNFKKDFVSSIMIIVVASHDSSVYMGGYSVQTLRYGKY-DVTTEIAYTELAEG---SLWIHHLNPNARIYLVHVITPQGFYQVSDSVA-PLA 
  consensus/100%         hYsht+DYRYsoYhpp.sl.Y.o.hshuss...sFs.s.hhhVhu..s..hhhtsh..Q..p.sha.sl.h..uahc.s.t...slhlch.sP.htha.....s.pGhh.sus.h..sl. 
  consensus/90%          hYsht+DYRYsoYhpp.sl.Y.o.hshuss...sFs.s.hhhVhu..s..hhhtsh..Q..p.sha.sl.h..uahc.s.t...slhlch.sP.htha.....s.pGhh.sus.h..sl. 
  consensus/80%          hYsht+DYRYsoYhpp.sl.Y.o.hshuss...sFs.s.hhhVhu..s..hhhtsh..Q..p.sha.sl.h..uahc.s.t...slhlch.sP.htha.....s.pGhh.sus.h..sl. 
  consensus/70%          sYslu+DYRYuoYhpp.SlhY.TtlohuPs...sFssshhhhVlAsssoslhltuhspQ..RYuhY.slohtsAahE.upp...olhI+phsP.huhY.....s.pGhhpsSsphs.Pls 

1 mardi-ORF1     100.0%  EQEIMEYKCTHI-----------DRTYTCIPTDLIYATTVWRQIFSM--GHIFPVYPSNNCLPYRPTNA--IIWRRPVLEIGVWNNITASFQRNKQLMALTFENHNTATNTTLLTFHDVC 
2 melhe-LORF1     46.9%  EQAVVDYNCLPK-----------DADHLCVSTKNVSSITIWRKLLLA--NYSFSILSIDDCLPYIPHMA--VIWKHPAIEVATWRNITVTFHPSVQLMAMRFENVLTPRNYTLMTFHDVC 
3 aviad-Q9Q9I2    19.0%  DRKVMTGGCVRTMHCNPTRDPFGRPAHYCMVTKERFPLMSYRTMLNPNGGSQVSVPPQSGCLADRDASIAMIPIQLADVEVKVGHGLKVDLSKSPFWL-TSIQLTDSSGTHKLYSFWDVC 
4 aviad-RTL6      20.4%  NRQIMTGGSVRTMYCTRTPDPLGRPSHYCMYTKEHFPIMQYRTMLNPNGGAHINVPPTAGCLVDKNTTAGMIVSKLPDMNVTVGHKLQIDLSRSPFWL-MSVHLTDRVGTHRLVSYWDTC 
  consensus/100%         pptlhphtsh.h...........c.sahCh.Tc.h.shh.aRphh....s..hsl.s.ssCLs.hst.h..l..phsshpltshptlphshp.s..hh.hphp.h.pstshpLhoaaDsC 
  consensus/90%          pptlhphtsh.h...........c.sahCh.Tc.h.shh.aRphh....s..hsl.s.ssCLs.hst.h..l..phsshpltshptlphshp.s..hh.hphp.h.pstshpLhoaaDsC 
  consensus/80%          pptlhphtsh.h...........c.sahCh.Tc.h.shh.aRphh....s..hsl.s.ssCLs.hst.h..l..phsshpltshptlphshp.s..hh.hphp.h.pstshpLhoaaDsC 
  consensus/70%          -pplMshsCl+p...........cssHhChsTKphaslh.aRphLss..GtphsV.PpssCLs.+sssA..Ilh+hPslEVsVh+slplshp+Ss.hh.hohc.ssosssapLhoFaDVC 

1 mardi-ORF1     100.0%  RESKIRSVVYFEYDWLETSMNITVLIPGLYTLRWFFPFEIIEMPVRVSYN-NSFAQALTTSRV-------------------- 
2 melhe-LORF1     46.9%  RADEINSGIFFEYDWLGANMTIAVSKAGSYVLRWFFEMGIYEIPIAVYEN-ERE----------------------------- 
3 aviad-Q9Q9I2    19.0%  QTA---AQCVFQLDRMKKEFTVTFFNADVFELEFFLEFEVIKLKVTVSP-----LEPVSVEFPPEPTASLNSTSTDSASTVST 
4 aviad-RTL6      20.4%  VTS---SQCVFHLNRMKKEFNVTFFAEDVYDLEFFLQFEVIKLKVTVSSPVNRVVEKVTTAEPIANYTSVNATSV-------- 
  consensus/100%         .ts...u.hhFphshhttphslsh...s.a.LcaFh.htlhch.ltV.................................... 
  consensus/90%          .ts...u.hhFphshhttphslsh...s.a.LcaFh.htlhch.ltV.................................... 
  consensus/80%          .ts...u.hhFphshhttphslsh...s.a.LcaFh.htlhch.ltV.................................... 
  consensus/70%          psu...StshFchDhhcpphslThhtsslYsLcaFhpFElIcl.VsVS.s.pp.hp.lost.s.................... 

MView 1.56, Copyright © 1997-2013 Nigel P. Brown