Reference sequence (1): 9dein-g8n9b1 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 9dein-g8n9b1 100.0% MRRTGYLHLYGLNLVFDRVGRGLAVLLLAEEAACWPEPLPAGYTFYLLDLPGYGRTGGSPMPPEELAEYVAAFLVMANLGRPPILVRGLGEAVGRVLAERGYPVFSGENLS--EALFKVG 2 9dein-w2u3y5 75.2% MRRTGYLHLYGLNLVFDRLGRGPAVLLLAEEAEVWPEVLPQGFTFYLLDLPGYGRTGGPSMAPEELAEYVVGFLVMLNLGSPPILVRGIGEAVGEVLRDRGYRVFSGDALD--EGLKRAV 3 thess-e8pmd3 76.9% MRRTGYLHLYGLNLVFDRVGRGPGVLLLAEEARAWPEVLPEGYTFYLLDLPGYGRTGGPRMAPEELAEYVVGFLVMLNLGSPPILVRGIGEAVGEVLRDRGYKVFSGVSLE--EGLKSVM 4 9dein-h7ghi0 73.3% MRRTGYLHLYGLNLVFDRVGKGPPVILLAEEASRWPEALPVGHTFYLLDLPGFGRTGGPRMTPEELAEYVAGFMVLLNLGSPPIFTLGLGEAVGAVLAERGYRVLPGGSLR--EALSKGF 5 theth-h9zpz9 73.3% MRRTGYLHLYGLNLVFDRVGKGPPVILLAEEASRWPEALPVGHTFYLLDLPGFGRTGGPRMTPEELAEYVAGFMVLLNLGSPPIFTLGLGEAVGAVLAERGYRVLPGGSLR--EALSKGF 6 teth8-Q5SI36 57.3% MRRAGYLHLYGLNLVFDRVGKGPPVLLVAEEASRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLRALPAEGVEVAEVLSSKL 7 thetg-f6ddv5 58.0% MRRAGYLHLYGLNLVFDRVGKGPPVLLVAEEASRWPEALPEGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEALGLRVLPAEGVEVAEVLSSKL 8 theos-k7r725 64.0% MRRTGYLHLYGLNLVFDRVGRGRPVVLLAEEAGRWPERLPEGFAFYLPDLPGYGRTGGPSMAPEELAEYAAAFAVMLNLGNPPFLLRGVGLLVGPFLEARGFAVCPAE-----EDLITAL consensus/100% MRRsGYLHLYGLNLVFDRlG+G.sVlLlAEEAthWPE.LP.GasFYL.DLPGaGRTtGs.MsPEELAcassuFhVhhNLGtP.hhhhGlG.hlG.hLtthGh.shsu......EsL.phh consensus/90% MRRsGYLHLYGLNLVFDRlG+G.sVlLlAEEAthWPE.LP.GasFYL.DLPGaGRTtGs.MsPEELAcassuFhVhhNLGtP.hhhhGlG.hlG.hLtthGh.shsu......EsL.phh consensus/80% MRRsGYLHLYGLNLVFDRVG+G.sVlLlAEEAttWPEsLP.GasFYLLDLPGaGRTtGPpMsPEELAcaVsuFhVhhNLGsP.lhhhGlG.AlG.hLtthGhtVhsutslp..EsL.phh consensus/70% MRRTGYLHLYGLNLVFDRVG+GPsVlLLAEEAupWPEsLPtGasFYLLDLPGYGRTGGPpMsPEELAEYVAGFhVMhNLGuPPlLlRGlG.AVG.hLttRGa+Vhsutulc..EsLppsh 1 9dein-g8n9b1 100.0% SL------------- 2 9dein-w2u3y5 75.2% NMD------------ 3 thess-e8pmd3 76.9% GMG------------ 4 9dein-h7ghi0 73.3% ST------------- 5 theth-h9zpz9 73.3% ST------------- 6 teth8-Q5SI36 57.3% SYGNIDLGGNL---- 7 thetg-f6ddv5 58.0% SHGSIDPGGNL---- 8 theos-k7r725 64.0% SN--------LCEKG consensus/100% s.............. consensus/90% s.............. consensus/80% uh............. consensus/70% Sh............. |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties
hydrophobic => bright-green { A, G, I, L, M, P, V }
large hydrophobic => dark-green { F, H, W, Y }
cystein => yellow { C }
negative charge => bright-blue { D, E }
positive charge => bright-red { K, R }
polar => purple { N, Q }
small alcohol => dull-blue { S , T }
any => dark-gray { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol => o { S, T }
aliphatic => l { I, L, V }
aromatic => a { F, H, W, Y }
charged => c { D, E, H, K, R }
hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative => - { D, E }
polar => p { C, D, E, H, K, N, Q, R, S, T }
positive => + { H, K, R }
small => s { A, C, D, G, N, P, S, T, V }
tiny => u { A, G, S }
turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }