Reference sequence (1): 9psed-q5udq2 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 9psed-q5udq2 100.0% -------------------------------------------------------------------FNGIGANLELVFPFVAALDPDLEVIAFDVPGVGGSSTPNRPYRFPGLAKLTAR 2 psepf-PHAZ 84.2% --------------MPHP----------------FIF--RTVELDGQTIRTA-VRPGK-PHLTPLLIFNGIGANLELVFPFVAALDPDLEVIAFDVPGVGGSSTPSRPYRFPGLAKLTAR 3 psecl-PHAZ 80.7% --------------MPQP----------------FIF--RTVDLDGQTIRTA-VRPGK-PHLTPLLIFNGIGANLELVFPFVQALDPDLEVIAFDVPGVGGSSTPSRPYRFPGLAKLTTR 4 burca-PHAZ 80.6% --------------MPQP----------------YVF--RTVDLDGQSIRTA-VRPGK-SHLTPLLIFNGIGANLELVFPFIQALDPDLEVIAFDVPGVGGSSTPRRPYRFPGLAKLTAR 5 pseol-phab 79.2% --------------MPQP----------------YIF--RTVELDNQSIRTA-VRPGK-PHLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLTAR 6 psepu-PHAZ 78.8% --------------MPEP----------------YIF--RTVELDDQSIRTA-VRPGK-PHLTPLPIFNGIGANLELVFPFIEALDPDLEGIAFDVPGVGGSSTPRHPYRFPGLAKLTAR 7 pse14-q48pi8 78.2% --------------MPQP----------------FVF--RSIDLNGHTIRTA-VRPGK-SHLTPLLIFNGIGANLELVFPFVEALDPDLEVIAFDVPGVGGSSTPNRPYRFPGLAKLAAR 8 psesy-PHAB 77.9% --------------MPQP----------------FVF--RSIDLNGHTIRTA-VRPGK-SHLTPLLIFNGIGANLELVFPFVEALDPDLEVIAFDVPGVGGSSTPKRPYRFPGLAKLAAR 9 psepu-q6pli2 76.3% --------------MPQP----------------YVF--RTVELDDQSIRTA-VRPGK-PHLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRQPYRFPGLAKLTAR 10 9psed-q6ufw0 74.2% ----------------MP----------------FEF--RTIELDGQTIRTA-VRPGK-KHMTPLLIFNGIGANLELVFPFVAALDPDLEVIAFDVPGVGGSSTPSTPYRFPGLAKLAAR 11 pseae-phaD 73.3% --------------MPQP----------------FVF--RTIDLDGQTIRTA-VRPGK-EGSTPLLIFNGIGANLELVFPFVQALDPELEVIAFDVPGVGGSSTPSVPYRFPGLAKLAAR 12 psere-PHAZ 74.0% --------------MPLP----------------FVF--RTIELDGQTIRTA-VRPGQ-SHMTPLLIFNGIGANLELVFPFVQALDPDLEVIAFDVPGVGGSSTPSRPYRFSSLAKLAAR 13 pseme-PHAZ 74.4% --------------MPQP----------------FVF--RTIDLDGQTIRTA-VRPGN-SQLVPLLIFNGIGANLELVMPFVAALDPELEIIAFDVPGVGGSSTPATPYRFPGLAKLAAR 14 burs3-q396v5 47.0% MHSADAAGSDLPGRAPAAPTVAPGAADGRTTGGGFVI--RTIDVNGQVLRVG-VKPGS-DASPPLLVFNGIGANLELLEPFVAALD-DVRVIAFDVPGVGGSPAPLVPYRFSTLSVLADR 15 cuppj-q46zd3 44.8% MTTNNA--------SPEA---------------GHIMQTRTVDLDGQVLRVG-IRPGS-GDLPPLLMFNGIGANLELVEPFVDALP-DVEVIIFDIPGAGGSPAPLFPYRFSNLCVMADK 16 9sphn-q2n9u0 37.1% ----------------------------------------MEEVGGRTLRVAKWRLDAPSDHPPILFFNGIGANIEAVAPLAEVLD-DRAFIMFDMPGVGESPDPVLPYNPFTMSWTAAQ 17 novad-q2g8e5 32.6% ----------------------------------------MIGVAGRRLHVARWHSGA-SERPPLLLLNGIGMNLELLAPVARSLP-EREVICFDMPGTGNSPDPVFPYSISCMALTTAS 18 sphal-q1grr6 28.0% --------------MSRI-------------SGRPAI--STQHVHGLTLRVARWRQGA--PGTPLLFLNGIGADIAAAAPLLAQMH-GREAWTLDMPGVGGSPDALLPYAAPTMAAIVME 19 psepf-q3kch8 30.9% ------------------------------------MTTHRLTTKGLQLNVSIC-----GQGSPLLLLNGLGGLIRTFDPLRNELD-DFMTITLDVPGVGKSQMPRWPFRLPRHTDVIAG 20 psesp-Est33 30.1% ------------------------------------MTTRKLIIKDLQLNVSIS-----GQGSPLLLLNGLGGLIRTFDSLRDELG-DFMTITLDVPGVGKSQMPRWPMRLPRHADLIAE consensus/100% ...................................................................hNGlGh.lthh.shht.h..th.hhhhDhPGsGtS..s..Pht..ths.hh.t consensus/90% ..........................................tlts..lpsu.h......t.sPLLhhNGIGuslchh.PhhttLs.-htsIshDhPGVGtSssP.hPYphsshuhhssp consensus/80% ....................................h..+plclsspslRsu.h+.Gt.sphsPLLlFNGIGANLELlhPhltuLD.DhEsIsFDVPGVGGSssP.hPYRhsshAtlsAc consensus/70% ...............s.s................ahh..Rol-lcGpolRsA.lRPGp.sphoPLLlFNGIGANLELVhPFlpALD.DlEVIAFDVPGVGGSssPphPYRFPsLAcLsAR 1 9psed-q5udq2 100.0% MLDYLDY-GQVNVIGVSWGGALAQQFAYNYPERCKKLVLAATAAGTVMVPGKPKVLWMMASPRR---YIQPSHVIRIAPMIYGGAFRRDPTLAASHAAKVRSAGKLGYYWQLVAGFGWTS 2 psepf-PHAZ 84.2% MLDYLDY-GQVNVIGVSWGGALAQQFAYDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRR---YIQPSHVIRIAPMIYGGSFRRDPTLAASHAAKVRSAGKLGYYWQLFAGLGWTS 3 psecl-PHAZ 80.7% MLDYLDY-GQVNVVGVSWGGALAQQFAYDYPERCKKLVLAATAAGAFMVPGKPKVLWMMASPRR---YIQPSHVIRIAPLIYGGSFRRDPNLAAEHASKVRSAGKLGYYWQLFAGLGWTS 4 burca-PHAZ 80.6% MLDYLDY-GQVNVIGVSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWLMASPRR---YIQPSHVIRIAPDIYGGAFRRDPDLALSHAAKVRSSGKLGYYWQLFAGLGWTS 5 pseol-phab 79.2% MLDYLDY-GQVNVIGVSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRR---YVQPSHVIRIAPTIYGGGFRRDPELAMQHASKVRSGGKMGYYWQLFAGLGWTS 6 psepu-PHAZ 78.8% MLDYLDY-GQVSAIGVSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRR---YVQPSHVIRIAPMIYGGAFRRDPDLAMHHASKVRSGGKMGYYWQLFAGLGWTS 7 pse14-q48pi8 78.2% MLDYLNY-GQVNAIGVSWGGALAQQFAHDYPERCKKLVLAATSAGMAMVPGKPRVLWLMASPRR---YIQPSHVIRIAPEIYGGAFRRDPNLAANHAAKVRSSGKLGYYWQLFAGMGWTS 8 psesy-PHAB 77.9% MLDYLNY-GQVNAIGVSWGGALAQQFAHDYPERCKKLVLAATSAGMAMVPGKPRVLWLMASPRR---YIQPSHVIRIAPEIYGGAFRRDHNLAANHAAKVRSSGKLGYYWQLFAGMGWTS 9 psepu-q6pli2 76.3% MLDYLDY-GQVNVIGVSWGGALAQQFAHDYPERCKKLVLAATAAGAVMVPGKPKVLWMMASPRR---YVQPSHVMRIAPLIYGGAFRRDPPLAARHAAKVRSGGKLGYYWQLFAGLGWTS 10 9psed-q6ufw0 74.2% MLDYLDY-GQVTAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLWRMASPRR---YIQPSYGVHIAPDIYGGAFRRDPKLAMAFASKVRSSGKMGYYWQLFAGLGWTS 11 pseae-phaD 73.3% MLDYLDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLMRMASPRR---YIQPSYGVHIAPDIYGGAFRRDPKLAMAHASKVRSSGKLGYYWQLFAGLGWTS 12 psere-PHAZ 74.0% MLDYLDY-GQVSVIGVSWGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLWRMASPRR---YIQPSYGVHIAPDIYGGAFRRDPGLAMAHASKVRSSGKMGYYWQLFAGLGWTS 13 pseme-PHAZ 74.4% MLDYFDY-GQVNAIGVSWGGALAQQFAHDYPERCKKLILAATSAGAVMVPGKPKVLWRMASPRR---YVQPSYGVRIAPDIYGGAFRRDPKLAMAHASKVRSGGKMGYYWQLFAGLGWTS 14 burs3-q396v5 47.0% LLARLGHDGPVDVLGVSWGGALAQQFARLYPVRCRRLVLAATSPGVVMVPGRPSVLAKLAGPRR---YTDPGYLSRIGADLYGGAYRRDPAMLAEHGRHIQPPRGRGYLYQLLAATGWTS 15 cuppj-q46zd3 44.8% LLSHLGYAGPVDTLGVSWGGALAQEFARLYPQRCRRLVLAATSPGVLMVPGSPSVLTKMIGIRR---YTDAEYLRRVGGDIYGGAFRDDPSLLDVHGGHMRPPRGRGYLYQLLAAWGWSS 16 9sphn-q2n9u0 37.1% LLGRYDI-DEVDVLGISWGGAMAQHFALQHGARTRRLVLIATTPGMAMVPGNPAAFTKMANPRR---YIDPDFMNEHFATLYGGA-TENPGQKAEHVGRLKPPSPRGYLYQLLCMLGWTS 17 novad-q2g8e5 32.6% LLDRLEI-DRADVLGISWGGAVAQQFAFQHRARIGKLVLAATAAGATMIPGNAALLAHLSDPRE---YSVERTLKRNLASIYNGG-----GSARVSLNAAKAPSPLGFSYQMAAFASWSS 18 sphal-q1grr6 28.0% IARRFGH-ESLDVAGFSWGGALAQQVAIQFPGRVRRLVLMATTPSV----GAPGIGW--------------------------AALLDDDMLAS--GLRRPTATPLGLAYQSLAMAGWTS 19 psepf-q3kch8 30.9% MLEQLGI-DQVDVFGVSWGGALAQEFALRYPSRVRRLILAATSPGPLLLMKPADVMDFFRKSKNTKTHQQERSGHSVQTLLRFGV-----------MKGMLSVNPRTYYFQLAALIGWTS 20 psesp-Est33 30.1% MLKQLGV-DQVDVFGVSWGGALAQEFALRHPSMVRRLILAATSAGPVVLVKPADILEFFGSSKGAKLRKKEGSRNSIQALLRFGV-----------AKGMLTGNPRTYYHQLAALVGWTS consensus/100% hht.hth.t.hsshGhSWGGAhAQphAh.a..hht+LlLhATssu.....t.sthh...........................us...........h.th.sst.hsh.aQ.hshhuWoS consensus/90% hLphhsh.spVsshGlSWGGALAQpFAhpaPtRs++LlLAATusGhhhlsGtstlhhhhtss+p...a.p.t.h.ph.s.lhhGu.......h...stthhsss.hGYhaQLhAhhGWTS consensus/80% hLchLsa.spVsslGVSWGGALAQQFAhpYPpRs++LlLAATusGssMVPGpPpVLhhhuuPRR...Yhpssahh+lts.lYGGuhpcDsthth.aus+h+oss.hGYhaQLhAhhGWTS consensus/70% MLDaLsY.GQVsslGVSWGGALAQQFAacYPpRC+KLVLAATuAGslMVPG+PcVLhhMASPRR...YlQPuash+Ius.IYGGAFRRDPtLAhtHAu+lRSuuthGYYaQLhAuhGWTS 1 9psed-q5udq2 100.0% IHWLHKINQ-PTLVLAGDDDPLIPLVNMRLLAWRIPNAQLHII-DDGHLFLITRAEVVAPIIMKFLEEERQRAVMHPHPAPLGG----- 2 psepf-PHAZ 84.2% IHWLHKIHQ-PTLVLAGDDDPLIPLINMRMLAWRIPNAQLHII-DDGHLFLITRAEAVAPIIMKFLQEERQRAVMHPHPTPLGG----- 3 psecl-PHAZ 80.7% IHWLHKIHQ-PTLVLAGDDDPLIPLINMRMLAWRIPNAQLHII-DDGHLFLITRAEAVAPIIMKFLEEERQRAVMHPHPTPFSGT---- 4 burca-PHAZ 80.6% IHWLHKIQQ-PTLVLAGDDDPLIPLINMRLLAWRIPNAQLHII-DDGHLFLVTRAEAVAPIIMNFLQQERQRAVMHPRPAPGG------ 5 pseol-phab 79.2% IHWLHKIQQ-PTLVLAGDDDPLIPLINMRLLAWRIPNAQLHII-DDGHLFLITRAEAVAPIIMKFLQQERQRAVMHPRPASGG------ 6 psepu-PHAZ 78.8% IHWLHKIHQ-PTLVLAGDDDPLIPLINMRLLAWRIPNAQLHTI-DDGHLFLITRAEAVAPIIMKFLQEERQRAVMHPRPASGG------ 7 pse14-q48pi8 78.2% IHWLHKVHQ-PTLVLAGDDDPLIPLVNMRLLAWRIPNAQLHII-DDGHLFLITRAEAVAPIIMGFLQQERQRAVMHPQPTPPRTR---- 8 psesy-PHAB 77.9% IHWLHKIHQ-PTLVLAGDDDPLIPLVNMRLLAWRIPNAQLHII-DDGHLFLITRAEAVAPIIMGFLQQERQRAVMHPQPTPTRTR---- 9 psepu-q6pli2 76.3% IHWAAQDQP-ADSGLAGDDDPLIPLINMRLLAWRIPNAQLHII-DDGHLFLIIRAEAVAPIIMKFLEQERQRARMHPRPASGT------ 10 9psed-q6ufw0 74.2% IHWLHKIRQ-PTLILAGDDDPIIPLINMRMLAWRIPNAELHVI-DDGHLFLVTRAETVAPIIMKFLQEERQRAVIHPRPFTPKAS---- 11 pseae-phaD 73.3% IHWLHRIRQ-PTLVLAGDDDPIIPLINMRVLAWRIPNAELHVI-DDGHLFLVTRAESVAPIIMKFLAEERRRAVMHPRPFLPKTG---- 12 psere-PHAZ 74.0% IHWLHRIRQ-PTLVLAGDDDPIIPLVNMRLLAWRIPNAELHVI-DDGHLFLVTRAETVAPIIMKLLAEERQRAVIHPQAVPLRSG---- 13 pseme-PHAZ 74.4% IHWLHKIRQ-PTLVMAGDDDPLIPLINMRLLAWRIPNAELHII-DDGHLFLVTRAEAVAPIIMKFLEEERHRAVMHPQPTPVRQH---- 14 burs3-q396v5 47.0% LPWLHALRQ-PTLVLHGNDDPIVPLVNARILAARIRRAELHVI-DDGHLFLVARADEVAPMVKRFLRKAID------------------ 15 cuppj-q46zd3 44.8% LPWLRALKQ-RTLVLHGSDDPIVPLINAKILSGCIPDSALHVFHDDGHLFLLTAARESARVVGEFLREGR------------------- 16 9sphn-q2n9u0 37.1% LPALPFLGK-ETLVMMGDDDQIVPVINGKILARMIPNARLEVVEGGGHLFLLTHADESIALIRDFLDAPENAESKAA------------ 17 novad-q2g8e5 32.6% LPILPMLSM-PVMVMADEEDQLVPPSNAHFLHHAIAHSELEMFRGGGHLFMLSQRERFVARLRTFLDDDAHAC---------------- 18 sphal-q1grr6 28.0% AAMLPLLKDVPVLVLMGERDGVVPACHGQTIAELIDGAVLEVV-PGSHLFPFTHAGTVAARISAFLERPPLQAAA-------------- 19 psepf-q3kch8 30.9% LLRLSRLLQ-RTLILAGDRDPLIQAYNGHILRRTIGRSELRLLKGEGHFFVVTSAGRTAVLVREFLCRHYDDEEKAPRIAN-------- 20 psesp-Est33 30.1% LLRLFRLRQ-RTLILTGDRDTLVQMYNAHILRRAIRRAEVHVLEGEGHFFVVTSAKRTAELIREFLCQQHDDEEPVPMIASGRLRPRLL consensus/100% h.hh.......s.hhhspcD.ll...phphlt.hI.tu.lchh.stuHhF.h.ttt..h.hl.thLtt..................... consensus/90% l.hL.hlpp..sLlhtG-cDsllPhhNh+hLthtIspupLcll.ssGHLFllopActsAshlhtFLppthptt................ consensus/80% lhhLttlpQ.sTLVLsGDDDPllPllNh+hLAhpIssApLHll.s-GHLFLlT+A-tsAslIhpFLpppcppt.hhs............ consensus/70% ltWL++lpQ.PTLVLAGDDDPlIPLlNhRlLAaRIPNApLHlI.DDGHLFLlTRAEsVAPlIhcFLpp-RpcAshtPp.hs.t...... |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties hydrophobic => bright-green { A, G, I, L, M, P, V } large hydrophobic => dark-green { F, H, W, Y } cystein => yellow { C } negative charge => bright-blue { D, E } positive charge => bright-red { K, R } polar => purple { N, Q } small alcohol => dull-blue { S , T } any => dark-gray { X } #protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986). # The classification of amino acid conservation. #J. Theor. Biol. 119:205-218. alcohol => o { S, T } aliphatic => l { I, L, V } aromatic => a { F, H, W, Y } charged => c { D, E, H, K, R } hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y } negative => - { D, E } polar => p { C, D, E, H, K, N, Q, R, S, T } positive => + { H, K, R } small => s { A, C, D, G, N, P, S, T, V } tiny => u { A, G, S } turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }