Reference sequence (1): 9burk-Q5YEW3 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 9burk-Q5YEW3 100.0% MRS---IRLKRLIAAVAL---GGAAAATQAASP------LPRLNVDKTQISVSGLSAGGFMANQLGYAYSGTF-MGVGIFAGGPYMCAGHSNYT------------SCMYNATITSSMRS 2 calma-PHAZ 68.8% MKT-----------RMLV---GWAAAAVLAAGPAWAVQSLPRLNIDKSQISVSGLSSGGFMANQLGVAHSSTF-MGVGVFAAGPYMCAGHYNYT------------ACMYNATISDGQLS 3 comte-PHAZ 63.2% MRV---QSWRSGVAALALW--GGVNLAAGAAVP------LGQYNIATDQISVSGLSSGGFMANQLGNAYSASF-MGVGIFAAGPYMCAGLNNYT------------ACMYNASISSAQLN 4 9euro-a0a421cwa8 46.1% MPT------FATFLGLAMS--GAASV---SAAA------LGAYNVDPNSISVSGLSSGGFMSAQLGVAYSDTFKVGFGVFAGGPYDCARSQSYT------------TCMYNQSPS---IT 5 aspfu-q4w9v8 45.4% MPT------VATFLGLAIS--GAAMA---SGAA------LGAYNVDPNSISVSGLSSGGFMSAQLGVAYSDTFKVGFGVFAGGPYDCARGQSYT------------TCMYNQNPS---IT 6 penfu-PHAZ 45.3% MFD------SVKIAWLVAL--GAAQV---AATA------LPAFNVNPNSVSVSGLSSGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYYT------------SCMYNGYPS---IT 7 acisp-Q9ZNH8 42.7% MAF-NFIRAAAAGAAIALC--GVASVH--AAVN------LPALKIDKTQTTVSGLSSGGFMAVQLHVAYSATFAKGVGVVAGGPFYCAEGSVVN---------ATGRCM--ASPTGIPTS 8 comac-PHAZCAC 43.5% MAF-NFIRAAAAGAAMALC--GVGSVH--AAVN------LPALKIDKTQTTVSGLSSGGFMAVQLHVAYSATFAKGAGVVAGGPFYCAEGSIVN---------ATGRCM--ASPAGIPTS 9 strex-PHAZ 31.8% MKIRQLLVAALTAVGIAATTVGGATAAVPAPTPG----SLQQYNI--GSTYVSGLSSGGFMANQMHVAYSDVF-EGAGIFSAGPYDCAQNSVNT---------AQYACMDTFMARKTPAQ 10 rhoru-q6ynp7 32.5% MRA----FCRFVGAALLLV--GLAGPA--WADS------LPKLAIDADHVTVSGISSGAYMANQFHVAHSARV-DGAGLVAGGLYGCAVSTVVNDKVMATASRALAHCMRQSAFLESADR consensus/100% M.............hhhh...Ghs......sss......L.thtl..sph.VSGlSuGuaMusQht.AaSs.h..GhGlhuuG.a.CA.....s............tCM..........p consensus/90% M..........hhhthhh...Ghuts...uuss......Lsthpls.sphoVSGLSSGGaMusQhtsAaSssF..GhGlhAuGPa.CAttp.hs............tCM..t..t...hp consensus/80% Mhh......hhhhhulsh...GsAss...uAss......Lsthsls.sphoVSGLSSGGFMAsQLtVAYSssF.hGhGlhAuGPY.CAttpshs............tCM.pts.s...hs consensus/70% Mts......thshsulAl...GsAsst..AAss......LsthNlD.sploVSGLSSGGFMAsQLtVAYSsoF.hGsGlFAGGPY.CAtspshT............sCMhsus.ot..ho 1 9burk-Q5YEW3 100.0% AMQASIDNW-SGAHIDPKAHVANQRVFLFVGNSDTTVGPNPMDAVHAQYQHNGV-RRTA------RVRGRNSTAHVFPTDFDATGNNACNSTASPYIANCGYDGAKAVLSRIYGTLQPRN 2 calma-PHAZ 68.8% TMQSSINHW-SGSQIDDKAGIAKQKIYLFVGTSDSTIGPNPMDALRKQYANNAVPTGND------EYIKRSGAAHVFPTDFDAAGNNSCGSTSSPYIANCGYDGAKAVLTRIYGTLNPRN 3 comte-PHAZ 63.2% AMQSSIDSYSSAASIDAKSRIAAQKIYIFTGTSDYTVGPNLTDALQTQYLNNGVPQGNI------AYVKRSGAAHVLPTDFDSSGNNACSSSASPYISNCGYDGAKAALTHFYGALNPRN 4 9euro-a0a421cwa8 46.1% TPVANMKSW-SGNQINPVSNLQSRKIYMWTGSADTTVGPNVMSQLKAQLANFDT-AANV------SYITTSGAVHTFPTDFDASGDNSCSSSVSPYISNCQYDGAGAVLKWMYGSLNARN 5 aspfu-q4w9v8 45.4% TPVANMKSW-SGNKINPVSNLQSRKIYMWTGTADTTVGPNVMSQLKTQLANFAS-AANV------SYITTSGAAHTFPTDFDAAGDNSCSSSVSPYISNCQCDGAGAVLQWMYGPLNARN 6 penfu-PHAZ 45.3% TPTANMKSW-SGNQIASVANLGQRKIYMWTGSSDTTVGPNVMNQLKAQLGNFDN-SANV------SYVTTTGAVHTFPTDFNGAGDNSCSLSTSPYISNCNYDGAGAALKWIYGSLNARN 7 acisp-Q9ZNH8 42.7% TLVNTTNTWAGQGVIDPVANLQNSKVYLFSGTLDSVVKTGVMDALRTYYNSFVP-AANV------VYKKDIASEHAMVTD---DYGNGCSTKGAPYISDCNFDLAGAMLQHLYGTLNARN 8 comac-PHAZCAC 43.5% TLVSTTNTWASQGVIDPVANLQNSKVYLFSGTLDSVVKTGVMDALRTYYNSFVP-AANV------VYKKDIAAEHAMVTD---DYGNACSTKGAPYISDCNFDLAGAMLQHLYGTLNARN 9 strex-PHAZ 31.8% LEQLTRDRA-TAGKVDPVANLSGDKVWLFHGTNDSTVKAAVNDDLATYYRDF---GADV------VYDNSSASGHAWVSP---LGPNSCSSTTSPYVNTCGGDPVRDMLTHLLGSVNPAS 10 rhoru-q6ynp7 32.5% FVGIARQLE-RAGAIDALAGLRGDRVYLFTGEADTVVGAKVVRTAAEALGTLGV-TTTLVSSLQGTPGAGAKAGHAFLTP--DRGNAACSAEKSPFFNACRYDQAEAILKVLYGPSLAPP consensus/100% h...shp...tts.lsshutlttp+laha.Gp.D.sltst..pthtt.h.p....tts..........tt.ts.Hsh.os....hssuCs.p.uPahssCthD.stshLphhhGs..s.s consensus/90% h...shpph.sts.Isshutlttp+lahasGs.DosVtssshstltt.hts.ss.tssh.......hhtp.uu.HshsTs...thsNuCuspsuPYlssCthD.AtAhLphhYGslpsts consensus/80% s..sshppa.oustIsshusltspKlYhasGosDosVtsslhstLps.hts.ss.susl......sYhppsuusHshsTD...sGsNuCSopsSPYIusCtaDhAtAhLphhYGsLNsRN consensus/70% s..ushpsW.SuupIDslAsLtspKlYlFoGouDoTVGssVMcsL+sthsshss.suNl......sYhpssuAsHsasTD..ssGsNuCSoosSPYIusCsaDsAtAhLpalYGoLNsRN 1 9burk-Q5YEW3 100.0% DAPA-GANYIEFDQTAFTN-----NPGMASTGWVYVPANCAAG--AQCRLHVALHGCQQSTGHIG--DRFVKNTGYTRWADTNNIIVLFPQAKTDNT-PRNTAASGMLPNPNACWDWVGW 2 calma-PHAZ 68.8% DTPP-ASNYIEFSQASFTN-----NPGMAATGWVYVPSDCAAG--AQCRLHVALHGCQQSYAQIG--DKFIKNTGYTRWADTNRIVVLFPQTKVDNT-SRSTAASGLLPNPNACWDWIGW 3 comte-PHAZ 63.2% DAPA-TGNYIEFNQASYTNA----NPGMASTGWLYVPQSCASG--TQCRLHVVLHGCQQSTDKIG--DKFVRNTGFSRWADTNNIIVLYPQTQVDNN-NRSTSKSGSLANPNACWDWIGW 4 9euro-a0a421cwa8 46.1% TGTL-SGSIVSFSQTGEYG-----ASGMDTTGYLYVPKACQSGSATVCKLHVALHGCLQSYSMIG--SDFVSNTGYNMWADTNNIIILYPQAVADNT-MHTVWTGMSLPNPNGCWDWVGW 5 aspfu-q4w9v8 45.4% PGTL-SGSIVSFSQTGEYG-----ASGMDTTGYLYVPRACQPGSSTVCKLHVALHGCKQSYSMIG--SKFVSNTGYNMWADTNDIIILYPQAVADNT-MHTIWTGMPLPNPNGCWDWVGW 6 penfu-PHAZ 45.3% TGTL-SGSVLSFAQ-GSYG-----ANGMDTTGYLYVPQSCASG-ATVCSLHVALHGCLQSYSSIG--SRFIQNTGYNKWADTNNMIILYPQAIPDYTSIHAIWNGGVLSNPNGCWDWVGW 7 acisp-Q9ZNH8 42.7% NATLPSGNFIEFNQSEFIS-----NHGMATTGWAYVPQACQAGGTATCKLHVVLHGCKQNVNDVQ--QQYVRNTGYNRWADSNNIVMLYPQTSLAAT--------------NSCWDWWGY 8 comac-PHAZCAC 43.5% NATLPTGNYIEFNQSEFIT-----NHGMATTGWAYVPQACQAGGTATCKLHVVLHGCKQNIGDVQ--QQYVRNTGYNRWADTNNIVMLYPQTSTAAT--------------NSCWDWWGY 9 strex-PHAZ 31.8% SSAL-TGKLVQFNQSGYAPGGSAGAISMGNEGFAYVPQSCQSG--ASCKLMVTLHGCYQYFGLVG--NALMDKAYLNEYADTNDMIVLYPQATTMTG------------NPRGCWDWWGY 10 rhoru-q6ynp7 32.5% APVL-SGRLSRFDQSAYVRGGNAIKASLWDEGLVYVPADCAAG--AACRLHIAFHGCKQSDQVLGSAEKFWDLAGYNGWADTNHIVVLYPQARAIGA-TEGFPLTAI--NPEGCWNWWGY consensus/100% sss..suph.pFsQ.t.h......t.uh.spGhhYVPtsCtsG..s.CpLhlshHGC.Q..t.lt..pthhp.shhs.aADoNphlhLaPQs....s..............puCWsWhGa consensus/90% sssh.suphlpFsQst.hs.....s.uMsspGahYVPtsCtuG..s.C+LHVsLHGC.Qshs.lt..ppahppsGashWADTNphlhLaPQs.s.ss..............puCWDWhGa consensus/80% sush.oGshlpFsQsu.hs.....s.GMssTGahYVPpsCtuG..s.C+LHVsLHGC.Qshs.lG..ppalpNTGYstWADTNsIllLYPQs.ssss............NPNuCWDWhGa consensus/70% susL.oGshlpFsQouahs.....ssGMsoTGalYVPpuCtuG..ssC+LHVsLHGCpQShu.lG..scFlcNTGYNcWADTNsIllLYPQspsssT..csh..sh...NPNuCWDWhGa 1 9burk-Q5YEW3 100.0% Y-GSNFAQKTGTQAAAIKAMVDHVAS----- 2 calma-PHAZ 68.8% Y-GSDFAQKGGSQISAIKAMVDHLASG---- 3 comte-PHAZ 63.2% Y-GNNFAQKSGVQMTAIKAMIDRIASGA--G 4 9euro-a0a421cwa8 46.1% Y-GANADQLGGVQMAAIVNQVARIVSGY--- 5 aspfu-q4w9v8 45.4% Y-GANADQVGGVQMAAIVNQVARVVSGYGAG 6 penfu-PHAZ 45.3% Y-GSNADQIGGVQMAAIVGQVKQIVSGF-QG 7 acisp-Q9ZNH8 42.7% D-SANYSKKSGPQMAAIKAMVDRVGSGG--- 8 comac-PHAZCAC 43.5% D-SANYSKKSGPQMAAIKAMVDRVSSGT--- 9 strex-PHAZ 31.8% K-SADYAQKSGPQMTAVMNMARALGAG---- 10 rhoru-q6ynp7 32.5% GLDGKFLGREGLQISAVNAMINALAGR---- consensus/100% ..ssph.thtG.QhsAl.s.httlsu..... consensus/90% ..uushsphsGsQhsAlhs.lttlsut.... consensus/80% h.uushsphuGsQhuAIhs.lsplsSG.... consensus/70% h.uuNasQ+uGsQMuAIhuMVc+luSG.... |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties
hydrophobic => bright-green { A, G, I, L, M, P, V }
large hydrophobic => dark-green { F, H, W, Y }
cystein => yellow { C }
negative charge => bright-blue { D, E }
positive charge => bright-red { K, R }
polar => purple { N, Q }
small alcohol => dull-blue { S , T }
any => dark-gray { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol => o { S, T }
aliphatic => l { I, L, V }
aromatic => a { F, H, W, Y }
charged => c { D, E, H, K, R }
hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative => - { D, E }
polar => p { C, D, E, H, K, N, Q, R, S, T }
positive => + { H, K, R }
small => s { A, C, D, G, N, P, S, T, V }
tiny => u { A, G, S }
turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }