Reference sequence (1): lacca-ESTI Identities normalised by aligned length. Colored by: consensus/70% and property |
1 lacca-ESTI 100.0% ----PKNDTSTSQKNHHQVATKEQSNRSTTRETQKQSA--NSNQNHQS-THQAQFKNQYPVVFVHGFLGFTGDNQFSL-APKYWGGTKYNIDRNLTNEGYNVHEANIGAFSSNYDRAVEL 2 staep-SE2403 98.8% ----PKNDTSTSQKNHQQVATKEQSNRSTTRETQKQSA--NANQNHQS-THQAQFKNQYPVVFVHGFLGFAGDNQFSL-APKYWGGTKYNIDRNLTNEGYNVHEANIGAFSSNYDRAVEL 3 staep-GEHD 66.8% ------VHKIGNTKTDKTVKTNQKKQTSLTSPRVVKSK--QTKHINQL-TAQAQYKNQYPVVFVHGFVGLVGEDAFSM-YPNYWGGIKYNVKKELTKLGYRVHEANVGAFSSNYDRAVEL 4 staha-Q9RGZ6 62.2% -------------KVNTNISTNPTQQQ--TTNQNIKPK--NTDEAT---IKSNQYKNKYPVVLVHGFLGLVGDNAPAL-YPNYWGGTKFPVKKRLEKLGYDVHEASVGAFSSNYDRAVEL 5 staau-lipas 55.7% GQNSPEKPTDKNTDNKQLIKDALQAPK--TRSTTNAAA--DAKKVRPLKANQVQPLNKYPVVFVHGFLGLVGDNAPAL-YPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNYDRAVEL 6 staxy-q2tpv1 60.0% -------------------------------------------------ANQVQPLNKYPVVFVHGFLGLVGDNAPAL-YPNYWGGNKFKVIEELRKQGYNVHQASVSAFGSNYDRAVEL 7 staau-LIP 52.5% ----------------------TLPNK--GTKELTAKA--KDDQTNKV-AKQGQYKNQDPIVLVHGFNGFTDDINPSV-LAHYWGGNKMNIRQDLEENGYKAYEASISAFGSNYDRAVEL 8 staep-lipas 53.2% ------------------------TNK--QSKQQVSEK--NEDQTNKS-AKQKQYKNNDPIILVHGFNGFTDDINPSV-LTHYWGGDKMNIRQDLEENGYEAYEASISAFGSNYDRAVEL 9 staxy-gehH 51.3% ------------------KENAVATPK--NQTQQNVEK--ANEQPNKA-AKQGQYKNQDPIILVHGFNGFTDDINPAV-LAHYWGGDKLNIRQDLESNGYETYEASVGALSSNYDRAVEL 10 staep-SE0245 47.9% -----------------------TTRN--TATTEASKE--LKDQTNKV-ASQKEYKNHDPIILVHGFNGYASGTGPVTGKGNYWGGNRLKIIQDYRAKGYNVMEASVSAFGSNYDRAVEL 11 stawa-GEHA 50.0% --------------------------N--KSKAQATQP--TKDQTNKV-APQQQYKNHDPIILVHGFNGFTADNGPGLGDSNYWGGERLNITQEARAKGYNVSEASVSALGSNYDRAVEL 12 stahy-lipas 46.1% ---MARIRARGSSRVDVPKENTTAQNK--FTSQASDKKPTVKAAPEAV-QNPENPKNKDPFVFVHGFTGFVGEVA-AK-GENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVEL consensus/100% .....................................................p.hNp.PhlhVHGF.Ghsst.t.sh...pYWGG.+h.l.pphpt.GYps.pAsluAhuSNa-RAVEL consensus/90% ..........................p...t.t........ttt.p...ttp.p.hNp.PllhVHGF.Ghss-.t.uh.hspYWGGp+hpl.pphpt.GYpshpAsluAhuSNYDRAVEL consensus/80% ..........................p..tppp..ttt...tppsp...spQtQ.KNp.PllhVHGF.Ghss-.s.uh.hspYWGGsKhplhpcLpptGYpsaEAsluAhuSNYDRAVEL consensus/70% ........................t.p..ppppt.tpt..tpppspt..spQtQaKNp.PllhVHGF.GhsuDss.ul.hspYWGGsKhslppcLcppGYpsaEASluAFuSNYDRAVEL 1 lacca-ESTI 100.0% YYYVKGGRVDYGAAHAAKYGHHRYGRTYKGIMRDWEPGKKIHFIGHSMGGQTIRQMEEFLRNGNQEEIEYQRQHGGTISDLFTGGKDNMVASI-TTLGTPHNGTPAADKIGTRKLVKETI 2 staep-SE2403 98.8% YYYVKGGRVDYGAAHAAKYGHHRYGRTYKGIMRDWEPGKKIHFIGHSMGGQTIRQMEEFLRNGNQEEIEYQRQHGGTISDLFTGGKDNMVASI-TTLGTPHNGTPAADKIGTRKLVKETI 3 staep-GEHD 66.8% YYYIKGGRVDYGAAHAAKYGHKRYGRTYEGIMPDWEPGKKIHLVGHSMGGQTIRLMEHFLRNGNQEEIDYQRQYGGTVSDLFKGGQDNMVSTI-TTLGTPHNGTPAADKLGSTKFIKDTI 4 staha-Q9RGZ6 62.2% YHYIKGGKVDYGAAHAAKTGHDRYGKFYQGIMPDWEPGKKIHLIGHSMGGQTIRLLEHFLRHGNQEEIDYQKAHGGEISPLFTGGKDNMISSI-TTLATPHNGTPAADKLGNTDFVKVYL 5 staau-lipas 55.7% YYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASI-TTLATPHNGSQAADKFGNTEAVRKIM 6 staxy-q2tpv1 60.0% YYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPNWEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHKAHGGEISPLFTGGHNNMVASI-TTLATPHNGSQAADKFGNTEAVRKIM 7 staau-LIP 52.5% YYYIKGGRVDYGAAHAAKYGHERYGKTYEGIYKDWKPGQKVHLVGHSMGGQTIRQLEELLRNGNREEIEYQKKHGGEISPLFKGNHDNMISSITTTLGTPHNGTHASDLAGNEALVRQIV 8 staep-lipas 53.2% YYYIKGGRVDYGAAHAAKYGHERYGKTYEGVYKDWKPGQKIHLVGHSMGGQTIRQLEELLRHGNPEEVEYQKQHGGEISPLYQGGHDNMVSSI-TTLGTPHNGTHASDLLGNEAIVRQLA 9 staxy-gehH 51.3% YYYIKGGTVDYGAAHAEKYGHERYGKTYEGVYKDWQPGKKVHLVAHSMGGQTVRQLEELLRNGNQEEIEYQKEHGGEISPLFQGNNDNMVNSI-TTIGTPHNGTHAADALGNEAIVRQLA 10 staep-SE0245 47.9% YYYIKGGRVDYGAAHAAKYGHERYGKTYAGAYKDWKPGQKIHLIGHSMGGQTIRYLEELLRHGSPEEVEYQKQHGGDISPLYKGGQDNMISSI-TTIATPHNGTHAADLLGNEEIIRQVA 11 stawa-GEHA 50.0% YYYIKGGTVDYGAAHAAKYGHERYGKSYAGAYRDWKPGQKIHLIGHSMGGQTVRLLEEMLRNGNPEEIEYQKQHGGEISPLYKGGQDNMISSI-TTLASPHNGTHASDLLGNEAIVRQAV 12 stahy-lipas 46.1% YYYLKGGRVDYGAAHSEKYGHERYGKTYEGVLKDWKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSI-TTIATPHNGTHASDDIGNTPTIRNIL consensus/100% YaYlKGGpVDYGAAHutKhGHcRYG+.YtGhh.sWpPGp.lHhluHSMGGQTlR.hEchLR.Gs.tEltYpptaGG.lS.LapGspsNMlsoI.TTluoPHNGo.AuD.hGsp.hl+.hh consensus/90% YYYlKGGpVDYGAAHAtKYGHcRYG+oYtGhh.sWcPGpKlHhlGHSMGGQTlR.hEchLRpGs.EEltYp+tHGGpISsLapGspsNMlsSI.TTluTPHNGo.AuDhhGspthl+phh consensus/80% YYYlKGG+VDYGAAHAAKYGHcRYG+TYpGlh.DWcPGpKlHhlGHSMGGQTIR.hEchLRpGN.EEItYQ+tHGGpISsLapGGpDNMluSI.TTluTPHNGT.AuDhhGspthl+phh consensus/70% YYYIKGGRVDYGAAHAAKYGH-RYGKTYcGlh.DWcPGpKlHLlGHSMGGQTIR.hEEhLRpGNpEEI-YQ+pHGGpISsLFpGGpDNMluSI.TTLuTPHNGT.AuDhlGNpthV+phh 1 lacca-ESTI 100.0% NRIGRLSGGKDVDIDLGFSQWGLKQQPNESYIDYAERVSKSKIWNTEDQAVNDLTTQGAEKINQQTSLNPNIVYTTYTGSATHTGP-LGNELPNSSEILLLNLTSCIIGKDANKEIRPND 2 staep-SE2403 98.8% NRIGRLSGGKDVDIDLGFSQWGLKQQPNESYIDYAERVSKSKIWNTEDQAVNDLTTQGAEKINQQTSLNPNIVYTTYTGSATHTGP-LGNELPNSSEILLLNLTSRIIGKDANKEIRPND 3 staep-GEHD 66.8% NRIGKIGGTKALDLELGFSQWGFKQQPNESYAEYAKRIANSKVWETEDQAVNDLTTAGAEKLNQMTTLNPNIVYTSYTGAATHTGP-LGNEVPNIRQFPLFDLTSRVIGGDDNKNVRVND 4 staha-Q9RGZ6 62.2% IRIGRLSGNKYSHIDLGFSQWGFKQRPDESYIDYVKRVANSKIWKTQDSAVYDLTTEGSEKLNQMTSINPNIVYTSYTGLDTHTGP-LGNENPNIRQFFLFDLTSRLIGRDDNVNVRKND 5 staau-lipas 55.7% FALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNMTSMNPNITYTTYTGVSSHTGP-LGYENPDLGTFFLMATTSRIIGHDAREEWRKND 6 staxy-q2tpv1 60.0% FALNRFMGNKYSNIDLGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNMTSMNPNITYTTYTGVSSHTGP-LGYENPDLGTFFLMDTTSRIIGHDAREEWRKND 7 staau-LIP 52.5% FDIGKMFGNKNSRVDFGLAQWGLKQKPNESYIDYVKRVKQSNLWKSKDNGFYDLTREGATDLNRKTSLNPNIVYKTYTGEATHKALNSDRQKADLNMFFPFVITGNLIGKATEKEWREND 8 staep-lipas 53.2% YDVGKMYGNKDSRVDFGLEHWGLKQKPNESYIQYVKRVQNSKLWKSKDSGLHDLTRDGATDLNRKTSLNPNIVYKTYTGESTHKTL-AGKQKADLNMFLPFTITGNLIGKAKEKEWREND 9 staxy-gehH 51.3% FDYAKFKGNKNSKVDFGFGQWGLKQREGETYAQYVQRVQNSGLWKTEDNGFYDLTREGAAKLNKNTSLNPNIVYKTYTGESTRPTL-FGNQKSDVNLFLPFTVTGNVIGKAAEKEWREND 10 staep-SE0245 47.9% YDYARSKGNKLSHVDVGLSQWGLKQREDETLAQYIQRVKQSKLWTTKDNGFYDLTTEGTDILNQKTSLNPNIVYKTYQGESTRPGP-NGTQKADVNMNIGYTLTANTIGKVKDKAWREND 11 stawa-GEHA 50.0% YDFAKSQGNKFSRADLGLTQWGLKQRPDETYIDYVKRVENSNLWKTKDNGFYDLTTEGAQELNNHTSLNPNIVYKTYTGESSDPDK-KGIHHRNSHMNIKYLPTTNVIGKLDDQAWREND 12 stahy-lipas 46.1% YSFAQMSSH-LGTIDFGMDHWGFKRKDGESLTDYNKRIAESKIWDSEDTGLYDLTREGAEKINQKTELNPNIYYKTYTGVATHETQ-LGKHIADLGMEFTKILTGNYIGSVDDILWRPND consensus/100% .thsp..ut...ph-hGhtpWGhKp..sEohhpY.pRltpStlWpopDpuh.DLThtGst.lNp.TphNPNIhYpoYpG.soc.s...s.p..s.t....h..TsphIGt.tp..hR.ND consensus/90% .ths+..GsK.splDhGhspWGhKQ..sEohhpYhpRltpSplWpocDpuh.DLThpGutclNp.TohNPNIsYpoYTG.uo+.s...G.p.ss.t..h.h.hTuphIGpstp.thR.ND consensus/80% .phu+h.GsK.splDhGhsQWGhKQpssEoYhpYhcRVtpSplWpocDpuh.DLTppGutclNp.TSlNPNIsYpTYTG.uo+.s..hG.p.ss.t..h.hshTuplIG+ssppthR.ND consensus/70% hchu+h.GsK.uclDhGhsQWGhKQpPsESYh-YscRVppSKlWpocDsuhaDLTp-GupcLNphTSLNPNIVYpTYTG.uTHss..hGpphssls.hhhhslTuplIG+sspcphR.ND 1 lacca-ESTI 100.0% GVVPVISSQHPSNQTFKKVDDHTPATDKGVWQVRPVQHDWDHLDLVGMDAFDLTHTGRELGQFYLGIMDNIMRIEEADG----ITNK 2 staep-SE2403 98.8% GVVPVISSQHPSNQAFKKVDDHTPATDKGVWQVRPVQHDWDHLDLVGMDAFDLTHTGRELGQFYLGIMDNIMRIEEADG----ITNK 3 staep-GEHD 66.8% GIVPVSSSLHPSDEAFKKVGMMNLATDKGIWQVRPVQYDWDHLDLVGLDTTDYKRTGEELGQFYMSMINNMLKVEELDG----ITRK 4 staha-Q9RGZ6 62.2% GIVPVSSSLFPTNQAAKTVGMTSPTTDKGIWQVKPVMNGWDHLDFVGLDATDYKRIGEELSQFYLGIINNLIRIEDIDG----IKH- 5 staau-lipas 55.7% GVVPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRKGAELANFYTGIINDLLRVEATESKGTQLKAS 6 staxy-q2tpv1 60.0% GVGPVISSLHPSNQPFVNVTNDEPATRRGIWQVKPIIQGWDHVDFIGVDFLDFKRKGAELANFYTGIINDLLRVEATESKGTQLKAS 7 staau-LIP 52.5% GLVSVISSQHPFNQAYTKATD---KIQKGIWQVTPTKHDWDHVDFVGQDSSDTVRTREELQDFWHHLADDLVKTEKLTD----TKQA 8 staep-lipas 53.2% GLVSVISSQHPFNQKYVEATD---KNQKGVWQVTPTKHDWDHVDFVGQDSTDTKRTRDELQQFWHGLAEDLVQSEQLTS----TNK- 9 staxy-gehH 51.3% GLVSTISSQHPFNQAFIEATD---EVKKGVWQVTPIKHGWDHVDFVGQDSTDSNHPTEELQQFWHNLAEDLVRNEQFDA-------- 10 staep-SE0245 47.9% GLVSVISGQYPLNQAHTSATD---QVQKGVWQVTPVKHNWDHGDFVGTDTSEVRISKEELEDFWDNMFEDMVRNEKVTD----KQ-- 11 stawa-GEHA 50.0% GLVSVVSAQHPSNQKYVDATD---QIQKGVWQVTPVQHDWDHGDFVGTQKDENGISIEQFQGFWDNLLNDAIRNEKVTD-------- 12 stahy-lipas 46.1% GLVSEISSQHPSDEKNISVDENS-ELHKGTWQVMPTMKGWDHSDFIGNDALDTKHSAIELTNFYHSISDYLMRIEKAES----TKNA consensus/100% Glss..Su.aP.sp..hpss....t.p+GhWQVhPh..sWDH.DhlG.p..-..h.h.phttFa.th.p.hhp.Ethps........ consensus/90% GlVss.Su.aP.sp.hhpss....thp+GlWQVpPh.psWDHhDhlG.D..-.th.ttELtpFa.shhpshh+.Ethps........ consensus/80% GlVsVlSS.HP.NQtahpssp...thpKGlWQVpPh.psWDHhDhlG.Dt.Dhp+pttELtpFahslhpshh+.Ephps....hp.. consensus/70% GlVsVISS.HP.NQsahpsss...tspKGlWQVpPl.psWDHlDFVG.DshDhp+stcELtpFahslhssllR.Ephsu....hpt. |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties hydrophobic => bright-green { A, G, I, L, M, P, V } large hydrophobic => dark-green { F, H, W, Y } cystein => yellow { C } negative charge => bright-blue { D, E } positive charge => bright-red { K, R } polar => purple { N, Q } small alcohol => dull-blue { S , T } any => dark-gray { X } #protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986). # The classification of amino acid conservation. #J. Theor. Biol. 119:205-218. alcohol => o { S, T } aliphatic => l { I, L, V } aromatic => a { F, H, W, Y } charged => c { D, E, H, K, R } hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y } negative => - { D, E } polar => p { C, D, E, H, K, N, Q, R, S, T } positive => + { H, K, R } small => s { A, C, D, G, N, P, S, T, V } tiny => u { A, G, S } turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }