Reference sequence (1): 9bact-b1pz93
Identities normalised by aligned length.
Colored by: consensus/70% and property
1 9bact-b1pz93   100.0%  ------MLRQFRILLLTL--SACFVLFSMSAQAA-------------------------------DTLDYGLYW---FDGNNTSVKAVEADGTVNNVPLKYYDPSKPTIVHFHGWQPGAA 
2 9gamm-q1n318    65.9%  ------MQKTLRLIAVMI--FACGMFIPAMANAA---------------------------------LDYGLYW---FDGNNNSVKAVEANGKVNKVQRSFYDPKKPTIVHFHGWQPASG 
3 9gamm-a3y9m0    57.1%  ---------------------MSISMSGLTYAAQ-------------------------------DYLDYGLHWAKMVGGNESQVKAVNHDGSLISQNSSYYDDSKPTVIYFHGWQNGSA 
4 cloab-q97db4    32.0%  ------MKKIMVSIALLL---TIIL----------------------GLSFNVKASEVNWDRSYWDSLDCGIYW---YGMDNKPYKFVS------GQTNPAFDPSKPTIIYIHGWQPEYY 
5 cloc7-d9smi5    31.1%  MKKKCKMKGKYLALALSL---SCIITPQLSYASEVD---NTTMASNNGSFINLDWTKLSWDNLDWNELNYGIYW---YGIGNKPYKFIP------NETNPAFDPSKPTIIYIHGWQPNYS 
6 aceaz-d9qsg6    23.6%  KVITLDPKRKYVDI------GNKIVLRGVKTGLEYQIFIKDDIKDDSGNSLKENHSF----EFKTSDLDYGLYW---FGPNGECEKYVD------GRKNEYYDPQKPVVIYSHGWQPGLY 
7 spich-f8eyv0    31.0%  ------YHPIFKTTAEGSGSSATIRISGPKQGRTYQITINGTITAENGTKLTVNQSR----TYTCANLDFGIWW---FSDNGEAQKYLP------GVPNQFYNASKPVVLYVHGWQKGSV 
  consensus/100%         .......................h...........................................LshGlaW...hs.stp..Khl.......t....hasspKPslla.HGWQ.t.. 
  consensus/90%          .......................h...........................................LshGlaW...hs.stp..Khl.......t....hasspKPslla.HGWQ.t.. 
  consensus/80%          ..........hh.h.......sphhh.....t.t...............................s.LDaGlaW...as.ssps.Khl.......s..p.haDspKPsllahHGWQss.h 
  consensus/70%          ......hpthhh.lh......ssIhh.shphstt...............................spLDYGlYW...ausNspshKhVs......s.sspaYDPSKPTllYhHGWQPu.s 

1 9bact-b1pz93   100.0%  TRGDGYDREDFRFVW--GDEDVITSTSWKNKGWNIAYFYWDQFADE-------SEVKDAEAKMWT-ANGPRGMRYKLKDGSYSTQFSPNKSVGQIAFEQVTAALAGNTSHYVRLSGHSLG 
2 9gamm-q1n318    65.9%  ILG----REDFNF------KGIITSRAWKEKGWNIAYFYWDQFANE-------LEVKHAEAKMWS-TNGPRGMRYKKSDGSYSTQNAPNKSIGQIAFEQVTAALADNSSNYLRLSGHSLG 
3 9gamm-a3y9m0    57.1%  EEG--YRRENFEFAD----INENTMKTWKEQGWNVGIFHWNQFADE-------GEVKDAEAKMWS-ANGNKGMRYRLSDGSYSTTQSPSISVGEIAFQQISTVLADNTSGNIRFAGHSLG 
4 cloab-q97db4    32.0%  LLR---HRESFYI------YGKDTADDWIKKGWNVGVFYWNQFSDE-------IGVLDAEAKIWT-TKGPQGMRWRKGDGSYETVNTVNIPASQLLYQKYVQAMKDYRGNEIRIAGHSLG 
5 cloc7-d9smi5    31.1%  LIK---HRESFYF------YGENAADSWIKAGWNVGVFYWNQFSDE-------LSVEDAESKIWS-PTARNSMRWRKSDGSYDVSSSIKKSSADLLYEEYVKALSGYKGSSIRIVGHSLG 
6 aceaz-d9qsg6    23.6%  EST--FTQDQPYIRS-THNYSINTGKIWRKKGYNIGAWMWGQFAAEGFLEDEIIRVEDAEAKIWF----DKNIRYKVRNGSYRYFNQ-KKSVHEIFYDTYIKALRNNTNENIRLVGHSIG 
7 spich-f8eyv0    31.0%  TNN--YWRENPYLWNDKYTSNVNTGTYWKQKGYNLGVFYWDQFADE-------DEVKDAEAKIWVGNNGLKQMRYKLSNGTYVAYST-TKSAADLLYDAYVQAVSSNTSGYIRLVGHSLG 
  consensus/100%         ..t....p-p..h.......s..s.p.WhptGaNluhahWsQFusE........tV.cAEuKhW......pthRa+htsGoY.h..t.phs.tplhapth.tshts.pst.lRhsGHSlG 
  consensus/90%          ..t....p-p..h.......s..s.p.WhptGaNluhahWsQFusE........tV.cAEuKhW......pthRa+htsGoY.h..t.phs.tplhapth.tshts.pst.lRhsGHSlG 
  consensus/80%          ..t....REs..h.......s..Tup.WhppGaNluhFaWsQFusE........pVcDAEAKhWs.spu.psMRa+hpsGSYps.ps.phSsuplhapphstAlts.put.lRlsGHSLG 
  consensus/70%          h.s...pREsFhh......hshsTucsW+cKGWNlGhFYWsQFADE.......hcVcDAEAKhWo.ssGs+uMRY+huDGSYss.so.sKSsuplha-phspALusNous.IRlsGHSLG 

1 9bact-b1pz93   100.0%  NQLATIVASKISDAVYAGSVGNNVTVDRLELLDPFWSADGKAYLGDANGDGANDWVGERTRWNIETLIQRHNLPVTWYKSSGIQDAWVGDRNTELEGIVTFIHNRFWYLASADYLNK--- 
2 9gamm-q1n318    65.9%  SQLATIVAGKISDAVTSGSISANVMVDRLELLDPFFSKYGKSYLGDANGDGYDDWTGEHVRWTVQTLINRHDIPVTGYYSSNINDLWIGDKNNGLRSMIAEMWHRYWYL--VDEVNK--- 
3 9gamm-a3y9m0    57.1%  NQLAVFVAQQINDGINSGSLANNLMPERIALLDPFWSQDGKSYLGDKNGDGQNDWTGERVRWAINEMIADQDIAVEWYKTSLIFDVWIGDQNTALESNVALINNRFWYLNAWDITSK--- 
4 cloab-q97db4    32.0%  SQMAILLTQQISDNVDSGNIPHELLPKRVALLDPYFSNLGKPYLG-------FKWTGEVCRGYVQNLISTKNIPFELYTSSDLTRGIAGDDNIGLQKMCATSYMKPTFYNDLQQIER--- 
5 cloc7-d9smi5    31.1%  SQMAIRLTKLISDNVDSGAIPPELLPSRVALLDPYFSNLGKEYLN-------YRWTGEVARECVSSFINNKNIPFELYKSSALTSGLAGDDNDELKKMCAYTELKPLFHAPIQQVEK--- 
6 aceaz-d9qsg6    23.6%  NQVVITLAHKISNNIKENNLDSHYMPKRIALLDPYWSN--SHFSN-------GKSIANVISDYAMEMATKNDVVIENYRTTK-TSTLIGDLNYALQDIAAVYRVNAGFLDYLKKLTKFRK 
7 spich-f8eyv0    31.0%  NQMATVLTYKVASAAKSGSLASSLVPKRVYLADPFWNKDGKTYLG-------GKWTGEVCRTYINYAISNFGTIVEQSKSTAIGGYLVGDENVDMRKMTAFFRIWPDFISLTDAALQ--- 
  consensus/100%         sQhshhls..lsssh.tssls.phhspRl.LhDPaast..p.a.s........c.huphhp..h..hhtp.sh.hp..hoo...thhhGD.N.thpt.hs.......ah..hp.h.p... 
  consensus/90%          sQhshhls..lsssh.tssls.phhspRl.LhDPaast..p.a.s........c.huphhp..h..hhtp.sh.hp..hoo...thhhGD.N.thpt.hs.......ah..hp.h.p... 
  consensus/80%          sQhAhhlstpIusslpuGslssplhscRltLLDPaaSp.GKtYLs........cWsGEhsR.hlpphIsppslshp.YpootltshhhGDpN.tLpphsAhh..p.hahs.hp.hp+... 
  consensus/70%          sQhAhhlsppISDslpSGulssplhPcRltLLDPaaSp.GKsYLG.......scWTGEhsRhhlpphIsppslslEhY+SSslssshlGDcNssLcphsAhhph+.hals.hctlpK... 

1 9bact-b1pz93   100.0%  -HNHVVPWYFRSMASAAPEEVTINWWNQRTQTGKDAASAATDDGRIRNMMG----DTYHW-------DQVEGRYTADPQDDQFERKNY------- 
2 9gamm-q1n318    65.9%  -HNHVVPNYFRSMASAPPEEVTINWWGRRSQTGNVAASASTSDSRVKAMMG----NTYYW-------DQVEGRYTSDPADDQFEIKRY------- 
3 9gamm-a3y9m0    57.1%  -HNHARRWYFQSMDSAAPEEVSINWWGTRSETGYDAASASTSDNRIKFMMG----NSYEW-------DQVEGRYTADPADDQFEVKDY------- 
4 cloab-q97db4    32.0%  -HYAAKYNYFSSIASNPPLE-----YANNQLTGNISASASTPTSRIAEMMG----PDYHW-------IQIGGNATTDTNDDIYEKHVDSTNY--- 
5 cloc7-d9smi5    31.1%  -HYDGKYTYFCSYRVSSPAE-----YVGTTPTGNVAASARTDTQRIAEMMG----KKYYW-------TQAADIFTEDVSDDTFSRSTRNISV-SP 
6 aceaz-d9qsg6    23.6%  EHNYATTWYFWSMKYDIP------------ANNNGVIGARASNYKIKQCMNIHRNSTWFWKMNWFGVGNMAGEETPSPYDDEFTMESGVISAIGN 
7 spich-f8eyv0    31.0%  -HSYAVLWYMWSMGGSV-------------QTQNGSLGAAAADSTVKSMMNYGKTSYYYW------YSEGSGNNTSTPFDDSYIRASGVSTW--- 
  consensus/100%         .H..sh..Yh.Sht.s...............st..shuAtsss.plt.hMs......a.W........phts..T.ss.DD.a.ht......... 
  consensus/90%          .H..sh..Yh.Sht.s...............st..shuAtsss.plt.hMs......a.W........phts..T.ss.DD.a.ht......... 
  consensus/80%          .H.hsh..YF.ShtsssP.............TspsuhuAtssst+lttMMs....spYaW.......sphtGp.Tsss.DDpaphpsh....... 
  consensus/70%          .HsauhhhYFpSMsuusP.E.....astpptTGNsuASAuTsssRI+pMMG....ssYaW.......sQstGphTsDPtDDpFphcsh....... 

MView 1.56, Copyright © 1997-2013 Nigel P. Brown

#protein: highlight amino acid physicochemical properties
hydrophobic          =>  bright-green      { A, G, I, L, M, P, V }
large hydrophobic    =>  dark-green        { F, H, W, Y }
cystein              =>  yellow            { C }
negative charge      =>  bright-blue       { D, E }
positive charge      =>  bright-red        { K, R }
polar                =>  purple            { N, Q }
small alcohol        =>  dull-blue         { S , T }
any       => dark-gray                     { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol          =>  o       { S, T }
aliphatic        =>  l       { I, L, V }
aromatic         =>  a       { F, H, W, Y }
charged          =>  c       { D, E, H, K, R }
hydrophobic      =>  h       { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative         =>  -       { D, E }
polar            =>  p       { C, D, E, H, K, N, Q, R, S, T }
positive         =>  +       { H, K, R }
small            =>  s       { A, C, D, G, N, P, S, T, V }
tiny             =>  u       { A, G, S }
turnlike         =>  t       { A, C, D, E, G, H, K, N, Q, R, S, T }