Reference sequence (1): bacan-q81tt2 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 bacan-q81tt2 100.0% MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY 2 baccz-q63ej3 99.6% MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY 3 bachk-q6hm10 99.6% MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY 4 bacc1-q73bx8 99.2% MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHTGRSYFLHGLIEEGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY 5 baccr-q81gm3 97.5% MSITERFFYLEKEPCVIYLPEKPNGFSVMLLGDYNYFIENGTSLWTQHAGRSYFLHGLIEQGYTVFSSNLYGRHWGNDQSVRLAKRLYDVVLRKETLNAKMHIMADGMGALVALEMMNKY 6 bacld-q65le0 38.8% MKITERFFQMDSEWNVVHLPYKPNGFLVFIFGDRNHFVGEDSSFWLQHYGRNQLLTSLRNKGYTLVNSNLFGRHWGSEKAVAYAKQLIHYVFKQEILNEKIHLLAEGTGALIADELLRSI 7 bacsu-yjau 44.5% MGITERYFQLGTEHNVIHLPYRPNGFGIFILGDRTHFVGHDSSFWQQHYGRNQLLSMLMNEGYTLFNSNLFGRHWGAEKAVTYAKQLIHSVLKQEILNPKIHILAEGMGALVADELLRFS 8 geoka-q5l1u3 39.6% MAGQRRFFQLDEQWCIVHVPERPNGFALFLMGDGDHFVNEQTSFWLEHPGRRQWLEDWLERGYTVFSSHLYGRHWGSPKAVRLARQLIYSVLKSEIVNQRIYIVAEGMGALVALQLLGAM 9 bachd-q9k8w0 36.7% MIDLRRTFQLEDQWCVIYLPARPNGFACMLFGDITHYVEQETCSWRQHPEREQFIRGLLHHGYTVITSNFFGRHWGSEQATKLALRLYHLSIKREILNPSIHLIGEGMGALLAMNVMEEM 10 bacsk-q5wex4 20.8% MPVYVRYIDLSGYTYSYSLPERPNGYAVFVMADDDSPYKEKA---------RVLANSLIEKGYTVLTAFRLKAHWGSPKAVAHARQVISLFIKQETVNKRIFICAEGASALIAKQLLADA consensus/100% M....Rhh.htt....h.lP.+PNGa.hhlhuD.s..htpts.........p.hhp.hhppGYTlhsu.hhttHWGs.pusthAhplh...h+pEhlN.phalhu-GhuALlA.phht.. consensus/90% M.hhcRaF.Lppp.sllaLP.+PNGFulhlhGDhsaaltptos.W.pH.tRp.hlpsLhpcGYTlhsSphaGRHWGs.puVthA+pLhp.sl+pEhlN.+halhA-GhGALlA.phhtth consensus/80% MslpcRaF.L-pp.sVlaLPt+PNGFulhlhGDhsaFlpptoShWhQH.GRp.hLpuLlccGYTVhoSNLaGRHWGs-puVphA+pLhchVl+pEhLNt+hHIhA-GMGALlAhphhpph consensus/70% MuITERFF.L-cE.CVIaLPE+PNGFuVhLhGDhsaFlcpsTShWpQHsGRs.aLcuLlEcGYTVFoSNLaGRHWGs-puV+LAKpLhclVL+pEhLNsKhHIhA-GMGALVAhEhhsch 1 bacan-q81tt2 100.0% PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAYDSKEEELEAKINKKSFTLLPSC-VPVKIFVSTQEKRGRKQL-LRKYEKMRQLNQCDTSVL---------FHLQDVK-YK 2 baccz-q63ej3 99.6% PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAYDSKEEELESKINKKSFTLLPSC-VPVKIFVSTQEKRGRKQL-LRKYEKMRQLNQCDTSVL---------FHLQDVK-YK 3 bachk-q6hm10 99.6% PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAYDSKEEELESKINKKSFTLLPSC-VPVKIFVSTQEKRGRKQL-LRKYEKMRQLNQCDTSVL---------FHLQDVK-YK 4 bacc1-q73bx8 99.2% PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLLKELSLAYDAKEEELEAKINKKSFTLLPSC-VPVKIFVSTQEKRGRKQL-LRKYEKMRQLNQCDTSVL---------FHLQDVK-YK 5 baccr-q81gm3 97.5% PECIRSVIMLNPCLDLPEYVEFEKEHKFFYKRLVKELSLAYDAKEEELESKINKKSFTLLPSC-VPVKIFVSTQEKRGRKQQ-LRRYEKMRQLNQCDTSVL---------FHLQDVK-YK 6 bacld-q65le0 38.8% PNQIRSTAMVNPCLDLQAHHKREKENKFFYKQFIKEIAESYGITEREAAD-YPFKSISPYHNL-VPVHIWQRLNGSPYPYMIHAKTFEERQLKGRHSVGLT---------LHLSEHP-QR 7 bacsu-yjau 44.5% PDHIRSAAMLNPCLDLQAHYESEKENKFFYKQFLKEVSKSYGISEKEAEA-IRYKTIQSYPSG-VPVHIWQRMTGAPYPYSVHAEVFKEKQQKQGSPVDMT---------FHLFEHP-SR 8 geoka-q5l1u3 39.6% PSQIRAVAMINPCLDVRAQLDYEQEHPFVYRRMVREIATAYGLKEEEVPEAVPSLFLSPHD---VPVTIWQLAGVSPYPSALHSRKYEQWMKTTNNRVRVV---------YELPEKR-RQ 9 bachd-q9k8w0 36.7% PDRIRSGFFINPCLDLVSYYDQEKANKLFYKRFLIEMAAAHEVSTEDVEPFIYQYFNNRYTNLETPMHIFHEMNERRYPVQSHSKPFQLKAERENRPVTLT---------LRMAQKSFSS 10 bacsk-q5wex4 20.8% TLEVRAAALIKPVLSLEAAFQAIKKDELAGKRFLKEVKAAYKLNGQ-----IDVAYLRAIDQQ-------QRLIDRNRPLAA-TRIYQLFSEATAQPTNLSSAQYADYYFFASLQNP-AE consensus/100% s.plRushhlpPsLsl.t.hp..ptp.hhh+phlhEht.uat.ptp.....h..h..p.h............h..t.h......c.ap.h..http.sth..........ht..p....p consensus/90% PppIRushhlNPCLDL.thhc.EKcpchhYKphl+EluhuYt.ppc-h...l..h.hp.hsp..sPhpIa.phttp.h.ht...+hap.htphptpssslh.........hch.ph...p consensus/80% PppIRSshMlNPCLDL.tah-hEKEpKFFYKRhlKEluhAYs.pEcEhts.Isht.hs.hssh.VPV+Ia.phptp.h.hth.h+hacphpphsppssslh.........a+L.-h...c consensus/70% P-pIRSshMlNPCLDL.tah-hEKEcKFFYKRhLKEluhAYchpEEElEshIspKohohhsst.VPV+Ia.php-+ph.hpl.hRpYEchpphspsssslh.........FHLt-hp.h+ 1 bacan-q81tt2 100.0% MVRQTTDFFKKYEEEL- 2 baccz-q63ej3 99.6% MVRQTTDFFKKYEEEL- 3 bachk-q6hm10 99.6% MVRQTTDFFKKYEEEL- 4 bacc1-q73bx8 99.2% MVRQTTDFFKKYEEEL- 5 baccr-q81gm3 97.5% MVRQTTDFFKKYEEEL- 6 bacld-q65le0 38.8% IHSAIANFFKTHEKVL- 7 bacsu-yjau 44.5% IYASICKFFHSHEKEL- 8 geoka-q5l1u3 39.6% LARQIGQFFCQYNELP- 9 bachd-q9k8w0 36.7% LIDPAYQFFRKHEKKLS 10 bacsk-q5wex4 20.8% LSKQMASFFASFH---- consensus/100% h.t.hhpFFtpap.... consensus/90% hhpthspFFppacc... consensus/80% hhcphspFF+paEc.L. consensus/70% hs+QhssFF+paEccL. |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties
hydrophobic => bright-green { A, G, I, L, M, P, V }
large hydrophobic => dark-green { F, H, W, Y }
cystein => yellow { C }
negative charge => bright-blue { D, E }
positive charge => bright-red { K, R }
polar => purple { N, Q }
small alcohol => dull-blue { S , T }
any => dark-gray { X }
#protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986).
# The classification of amino acid conservation.
#J. Theor. Biol. 119:205-218.
alcohol => o { S, T }
aliphatic => l { I, L, V }
aromatic => a { F, H, W, Y }
charged => c { D, E, H, K, R }
hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y }
negative => - { D, E }
polar => p { C, D, E, H, K, N, Q, R, S, T }
positive => + { H, K, R }
small => s { A, C, D, G, N, P, S, T, V }
tiny => u { A, G, S }
turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }