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LongText Report for: 6ioh-pdb

Name Class
6ioh-pdb
HEADER    TRANSFERASE                             30-OCT-18   6IOH              
TITLE     CRYSTAL STRUCTURE OF HOMOSERINE O-ACETYLTRANSFERASE IN COMPLEX WITH   
TITLE    2 HOMOSERINE FROM MYCOBACTERIUM SMEGMATIS ATCC 19420                   
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: HOMOSERINE O-ACETYLTRANSFERASE;                            
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 SYNONYM: HAT,HOMOSERINE TRANSACETYLASE,HTA;                          
COMPND   5 EC: 2.3.1.31;                                                        
COMPND   6 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS;                        
SOURCE   3 ORGANISM_TAXID: 1772;                                                
SOURCE   4 GENE: METX_1, METXA, ERS451418_01697;                                
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 562;                                        
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21_T1R(DE3);                             
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE   9 EXPRESSION_SYSTEM_PLASMID: PET30A                                    
KEYWDS    TRANSFERASE, BIOSYNTHETIC PROTEIN                                     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    H.-Y.SAGONG,K.-J.KIM                                                  
REVDAT   1   04-SEP-19 6IOH    0                                                
JRNL        AUTH   H.Y.SAGONG,J.HONG,K.J.KIM                                    
JRNL        TITL   CRYSTAL STRUCTURE AND BIOCHEMICAL CHARACTERIZATION OF        
JRNL        TITL 2 O-ACETYLHOMOSERINE ACETYLTRANSFERASE FROM MYCOBACTERIUM      
JRNL        TITL 3 SMEGMATIS ATCC 19420.                                        
JRNL        REF    BIOCHEM.BIOPHYS.RES.COMMUN.   V. 517   399 2019              
JRNL        REFN                   ESSN 1090-2104                               
JRNL        PMID   31378370                                                     
JRNL        DOI    10.1016/J.BBRC.2019.07.117                                   
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0238                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : NULL                                          
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.49                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.6                           
REMARK   3   NUMBER OF REFLECTIONS             : 46999                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.189                           
REMARK   3   R VALUE            (WORKING SET) : 0.188                           
REMARK   3   FREE R VALUE                     : 0.221                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 4.900                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2416                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.05                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 3322                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 95.91                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.2250                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 170                          
REMARK   3   BIN FREE R VALUE                    : 0.2760                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 5492                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 16                                      
REMARK   3   SOLVENT ATOMS            : 133                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 24.00                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : 1.85000                                              
REMARK   3    B22 (A**2) : 1.16000                                              
REMARK   3    B33 (A**2) : -3.01000                                             
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.184         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.157         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.110         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.942         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.946                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.928                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  5628 ; 0.009 ; 0.013       
REMARK   3   BOND LENGTHS OTHERS               (A):  5156 ; 0.001 ; 0.017       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  7681 ; 1.559 ; 1.641       
REMARK   3   BOND ANGLES OTHERS          (DEGREES): 11900 ; 1.362 ; 1.578       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   739 ; 6.739 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   295 ;28.911 ;21.119       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   813 ;14.679 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    49 ;19.063 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   721 ; 0.070 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  6537 ; 0.008 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):  1190 ; 0.001 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : NULL                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS U VALUES : REFINED INDIVIDUALLY                           
REMARK   4                                                                      
REMARK   4 6IOH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 08-NOV-18.                  
REMARK 100 THE DEPOSITION ID IS D_1300009629.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 10-MAY-17                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 5.5                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : PAL/PLS                            
REMARK 200  BEAMLINE                       : 7A (6B, 6C1)                       
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.97934                            
REMARK 200  MONOCHROMATOR                  : DOUBLE CRYSTAL MONOCHROMATOR       
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 270                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : HKL-2000                           
REMARK 200  DATA SCALING SOFTWARE          : HKL-2000                           
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 49446                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 2.000                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 50.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.6                               
REMARK 200  DATA REDUNDANCY                : 5.500                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200   FOR THE DATA SET  : 39.7900                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.03                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 97.3                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 4.20                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200   FOR SHELL         : 9.010                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: 6IOG                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 47.75                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 34 % (V/V) POLYETHYLENE GLYCOL (PEG)     
REMARK 280  400, 0.1 M SODIUM ACETATE/ACETIC ACID PH 5.5, 0.2 M CALCIUM         
REMARK 280  ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K            
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21                       
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X+1/2,-Y,Z+1/2                                         
REMARK 290       3555   -X,Y+1/2,-Z+1/2                                         
REMARK 290       4555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000       26.97000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       70.93200            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000       47.51650            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       70.93200            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000       26.97000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000       47.51650            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 4620 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 26140 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     ARG B   368                                                      
REMARK 465     LEU B   369                                                      
REMARK 465     GLU B   370                                                      
REMARK 465     HIS B   371                                                      
REMARK 465     HIS B   372                                                      
REMARK 465     HIS B   373                                                      
REMARK 465     HIS B   374                                                      
REMARK 465     HIS B   375                                                      
REMARK 465     HIS B   376                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    GLY B    46     NH2  ARG B   170              2.09            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG B 271   NE  -  CZ  -  NH1 ANGL. DEV. =   5.1 DEGREES          
REMARK 500    ARG B 271   NE  -  CZ  -  NH2 ANGL. DEV. =  -4.7 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A 152     -125.86     66.33                                   
REMARK 500    ASP A 206       41.65   -106.05                                   
REMARK 500    ALA A 240     -135.81     36.43                                   
REMARK 500    ASP A 245     -105.74     19.06                                   
REMARK 500    ARG A 271       -4.90   -140.09                                   
REMARK 500    ASP A 288       97.96   -172.06                                   
REMARK 500    TYR A 318       75.37   -118.28                                   
REMARK 500    ALA B  54     -167.09   -100.36                                   
REMARK 500    ASP B  67       55.35     37.81                                   
REMARK 500    SER B 152     -127.64     62.43                                   
REMARK 500    ALA B 240     -132.17     43.39                                   
REMARK 500    ASP B 245     -120.06     48.56                                   
REMARK 500    ASP B 288       93.74   -171.97                                   
REMARK 500    TYR B 318       74.04   -116.91                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 THR B   95     ASN B   96                  149.26                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue HSE A 401                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue HSE B 401                 
DBREF1 6IOH A    2   368  UNP                  A0A0D6HE46_MYCSM                 
DBREF2 6IOH A     A0A0D6HE46                          2         368             
DBREF1 6IOH B    2   368  UNP                  A0A0D6HE46_MYCSM                 
DBREF2 6IOH B     A0A0D6HE46                          2         368             
SEQADV 6IOH LEU A  369  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH GLU A  370  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS A  371  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS A  372  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS A  373  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS A  374  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS A  375  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS A  376  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH LEU B  369  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH GLU B  370  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS B  371  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS B  372  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS B  373  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS B  374  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS B  375  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQADV 6IOH HIS B  376  UNP  A0A0D6HE4           EXPRESSION TAG                 
SEQRES   1 A  375  ALA THR VAL PRO LEU PRO ALA GLU GLY GLU ILE GLY LEU          
SEQRES   2 A  375  VAL HIS ILE GLY ALA LEU THR LEU GLU ASN GLY THR VAL          
SEQRES   3 A  375  LEU PRO ASP VAL THR ILE ALA VAL GLN ARG TRP GLY GLU          
SEQRES   4 A  375  LEU ALA PRO ASP ARG GLY ASN VAL VAL MET VAL LEU HIS          
SEQRES   5 A  375  ALA LEU THR GLY ASP SER HIS VAL THR GLY PRO ALA GLY          
SEQRES   6 A  375  ASP GLY HIS PRO THR ALA GLY TRP TRP ASP GLY VAL ALA          
SEQRES   7 A  375  GLY PRO GLY ALA PRO ILE ASP THR ASP HIS TRP CYS ALA          
SEQRES   8 A  375  ILE ALA THR ASN VAL LEU GLY GLY CYS ARG GLY SER THR          
SEQRES   9 A  375  GLY PRO GLY SER LEU ALA PRO ASP GLY LYS PRO TRP GLY          
SEQRES  10 A  375  SER ARG PHE PRO GLN ILE THR ILE ARG ASP GLN VAL ALA          
SEQRES  11 A  375  ALA ASP ARG ALA ALA LEU ALA ALA LEU GLY ILE THR GLU          
SEQRES  12 A  375  VAL ALA ALA VAL VAL GLY GLY SER MET GLY GLY ALA ARG          
SEQRES  13 A  375  ALA LEU GLU TRP LEU VAL THR HIS PRO ASP ASP VAL ARG          
SEQRES  14 A  375  ALA GLY LEU VAL LEU ALA VAL GLY ALA ARG ALA THR ALA          
SEQRES  15 A  375  ASP GLN ILE GLY THR GLN SER THR GLN VAL ALA ALA ILE          
SEQRES  16 A  375  LYS ALA ASP PRO ASP TRP GLN GLY GLY ASP TYR HIS GLY          
SEQRES  17 A  375  THR GLY ARG ALA PRO THR GLU GLY MET GLU ILE ALA ARG          
SEQRES  18 A  375  ARG PHE ALA HIS LEU THR TYR ARG GLY GLU GLU GLU LEU          
SEQRES  19 A  375  ASP ASP ARG PHE ALA ASN THR PRO GLN ASP ASP GLU ASP          
SEQRES  20 A  375  PRO LEU THR GLY GLY ARG TYR ALA VAL GLN SER TYR LEU          
SEQRES  21 A  375  GLU TYR GLN GLY GLY LYS LEU ALA ARG ARG PHE ASP PRO          
SEQRES  22 A  375  GLY THR TYR VAL VAL LEU SER ASP ALA LEU SER SER HIS          
SEQRES  23 A  375  ASP VAL GLY ARG GLY ARG GLY GLY VAL GLU ALA ALA LEU          
SEQRES  24 A  375  ARG SER CYS PRO VAL PRO VAL VAL VAL GLY GLY ILE THR          
SEQRES  25 A  375  SER ASP ARG LEU TYR PRO ILE ARG LEU GLN GLN GLU LEU          
SEQRES  26 A  375  ALA GLU LEU LEU PRO GLY CYS GLN GLY LEU ASP VAL VAL          
SEQRES  27 A  375  ASP SER ILE TYR GLY HIS ASP GLY PHE LEU VAL GLU THR          
SEQRES  28 A  375  GLU LEU VAL GLY LYS LEU ILE ARG ARG THR LEU GLU LEU          
SEQRES  29 A  375  ALA GLN ARG LEU GLU HIS HIS HIS HIS HIS HIS                  
SEQRES   1 B  375  ALA THR VAL PRO LEU PRO ALA GLU GLY GLU ILE GLY LEU          
SEQRES   2 B  375  VAL HIS ILE GLY ALA LEU THR LEU GLU ASN GLY THR VAL          
SEQRES   3 B  375  LEU PRO ASP VAL THR ILE ALA VAL GLN ARG TRP GLY GLU          
SEQRES   4 B  375  LEU ALA PRO ASP ARG GLY ASN VAL VAL MET VAL LEU HIS          
SEQRES   5 B  375  ALA LEU THR GLY ASP SER HIS VAL THR GLY PRO ALA GLY          
SEQRES   6 B  375  ASP GLY HIS PRO THR ALA GLY TRP TRP ASP GLY VAL ALA          
SEQRES   7 B  375  GLY PRO GLY ALA PRO ILE ASP THR ASP HIS TRP CYS ALA          
SEQRES   8 B  375  ILE ALA THR ASN VAL LEU GLY GLY CYS ARG GLY SER THR          
SEQRES   9 B  375  GLY PRO GLY SER LEU ALA PRO ASP GLY LYS PRO TRP GLY          
SEQRES  10 B  375  SER ARG PHE PRO GLN ILE THR ILE ARG ASP GLN VAL ALA          
SEQRES  11 B  375  ALA ASP ARG ALA ALA LEU ALA ALA LEU GLY ILE THR GLU          
SEQRES  12 B  375  VAL ALA ALA VAL VAL GLY GLY SER MET GLY GLY ALA ARG          
SEQRES  13 B  375  ALA LEU GLU TRP LEU VAL THR HIS PRO ASP ASP VAL ARG          
SEQRES  14 B  375  ALA GLY LEU VAL LEU ALA VAL GLY ALA ARG ALA THR ALA          
SEQRES  15 B  375  ASP GLN ILE GLY THR GLN SER THR GLN VAL ALA ALA ILE          
SEQRES  16 B  375  LYS ALA ASP PRO ASP TRP GLN GLY GLY ASP TYR HIS GLY          
SEQRES  17 B  375  THR GLY ARG ALA PRO THR GLU GLY MET GLU ILE ALA ARG          
SEQRES  18 B  375  ARG PHE ALA HIS LEU THR TYR ARG GLY GLU GLU GLU LEU          
SEQRES  19 B  375  ASP ASP ARG PHE ALA ASN THR PRO GLN ASP ASP GLU ASP          
SEQRES  20 B  375  PRO LEU THR GLY GLY ARG TYR ALA VAL GLN SER TYR LEU          
SEQRES  21 B  375  GLU TYR GLN GLY GLY LYS LEU ALA ARG ARG PHE ASP PRO          
SEQRES  22 B  375  GLY THR TYR VAL VAL LEU SER ASP ALA LEU SER SER HIS          
SEQRES  23 B  375  ASP VAL GLY ARG GLY ARG GLY GLY VAL GLU ALA ALA LEU          
SEQRES  24 B  375  ARG SER CYS PRO VAL PRO VAL VAL VAL GLY GLY ILE THR          
SEQRES  25 B  375  SER ASP ARG LEU TYR PRO ILE ARG LEU GLN GLN GLU LEU          
SEQRES  26 B  375  ALA GLU LEU LEU PRO GLY CYS GLN GLY LEU ASP VAL VAL          
SEQRES  27 B  375  ASP SER ILE TYR GLY HIS ASP GLY PHE LEU VAL GLU THR          
SEQRES  28 B  375  GLU LEU VAL GLY LYS LEU ILE ARG ARG THR LEU GLU LEU          
SEQRES  29 B  375  ALA GLN ARG LEU GLU HIS HIS HIS HIS HIS HIS                  
HET    HSE  A 401       8                                                       
HET    HSE  B 401       8                                                       
HETNAM     HSE L-HOMOSERINE                                                     
FORMUL   3  HSE    2(C4 H9 N O3)                                                
FORMUL   5  HOH   *133(H2 O)                                                    
HELIX    1 AA1 TRP A  117  PHE A  121  5                                   5    
HELIX    2 AA2 THR A  125  LEU A  140  1                                  16    
HELIX    3 AA3 SER A  152  HIS A  165  1                                  14    
HELIX    4 AA4 THR A  182  ALA A  198  1                                  17    
HELIX    5 AA5 ASP A  199  ASP A  206  5                                   8    
HELIX    6 AA6 PRO A  214  ARG A  230  1                                  17    
HELIX    7 AA7 GLY A  231  ALA A  240  1                                  10    
HELIX    8 AA8 ASP A  248  GLY A  252  5                                   5    
HELIX    9 AA9 TYR A  255  ARG A  270  1                                  16    
HELIX   10 AB1 ASP A  273  SER A  286  1                                  14    
HELIX   11 AB2 GLY A  295  SER A  302  1                                   8    
HELIX   12 AB3 PRO A  319  LEU A  330  1                                  12    
HELIX   13 AB4 TYR A  343  HIS A  345  5                                   3    
HELIX   14 AB5 ASP A  346  GLU A  351  1                                   6    
HELIX   15 AB6 GLU A  351  HIS A  372  1                                  22    
HELIX   16 AB7 TRP B  117  PHE B  121  5                                   5    
HELIX   17 AB8 THR B  125  LEU B  140  1                                  16    
HELIX   18 AB9 SER B  152  HIS B  165  1                                  14    
HELIX   19 AC1 THR B  182  ASP B  199  1                                  18    
HELIX   20 AC2 PRO B  200  ASP B  206  5                                   7    
HELIX   21 AC3 PRO B  214  ARG B  230  1                                  17    
HELIX   22 AC4 GLY B  231  ALA B  240  1                                  10    
HELIX   23 AC5 ASP B  248  GLY B  252  5                                   5    
HELIX   24 AC6 TYR B  255  PHE B  272  1                                  18    
HELIX   25 AC7 ASP B  273  SER B  286  1                                  14    
HELIX   26 AC8 GLY B  295  SER B  302  1                                   8    
HELIX   27 AC9 ILE B  320  LEU B  330  1                                  11    
HELIX   28 AD1 ASP B  346  GLU B  351  1                                   6    
HELIX   29 AD2 GLU B  351  GLN B  367  1                                  17    
SHEET    1 AA1 8 GLY A  13  THR A  21  0                                        
SHEET    2 AA1 8 VAL A  27  TRP A  38 -1  O  LEU A  28   N  LEU A  20           
SHEET    3 AA1 8 CYS A  91  THR A  95 -1  O  ALA A  92   N  TRP A  38           
SHEET    4 AA1 8 VAL A  48  LEU A  52  1  N  VAL A  49   O  ILE A  93           
SHEET    5 AA1 8 VAL A 145  GLY A 151  1  O  ALA A 147   N  MET A  50           
SHEET    6 AA1 8 VAL A 169  LEU A 175  1  O  LEU A 173   N  VAL A 148           
SHEET    7 AA1 8 VAL A 307  ILE A 312  1  O  VAL A 308   N  GLY A 172           
SHEET    8 AA1 8 LEU A 336  VAL A 339  1  O  VAL A 339   N  GLY A 311           
SHEET    1 AA2 2 ALA A  79  GLY A  80  0                                        
SHEET    2 AA2 2 ILE A  85  ASP A  86  1  O  ILE A  85   N  GLY A  80           
SHEET    1 AA3 8 GLY B  13  THR B  21  0                                        
SHEET    2 AA3 8 VAL B  27  TRP B  38 -1  O  ILE B  33   N  VAL B  15           
SHEET    3 AA3 8 CYS B  91  THR B  95 -1  O  ALA B  92   N  TRP B  38           
SHEET    4 AA3 8 VAL B  48  LEU B  52  1  N  VAL B  51   O  ILE B  93           
SHEET    5 AA3 8 VAL B 145  GLY B 151  1  O  ALA B 147   N  MET B  50           
SHEET    6 AA3 8 VAL B 169  LEU B 175  1  O  LEU B 175   N  GLY B 150           
SHEET    7 AA3 8 VAL B 307  ILE B 312  1  O  VAL B 308   N  GLY B 172           
SHEET    8 AA3 8 LEU B 336  VAL B 339  1  O  VAL B 339   N  GLY B 311           
SHEET    1 AA4 2 ALA B  79  GLY B  80  0                                        
SHEET    2 AA4 2 ILE B  85  ASP B  86  1  O  ILE B  85   N  GLY B  80           
SITE     1 AC1 11 LEU A  55  THR A  56  SER A 152  ARG A 222                    
SITE     2 AC1 11 TYR A 229  HIS A 345  ASP A 346  HOH A 519                    
SITE     3 AC1 11 HOH A 534  HOH A 547  HOH A 565                               
SITE     1 AC2 10 LEU B  55  THR B  56  SER B 152  ARG B 222                    
SITE     2 AC2 10 TYR B 229  HIS B 345  ASP B 346  LEU B 349                    
SITE     3 AC2 10 HOH B 534  HOH B 538                                          
CRYST1   53.940   95.033  141.864  90.00  90.00  90.00 P 21 21 21    8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.018539  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.010523  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007049        0.00000                         
TER    2791      HIS A 376                                                      
TER    5494      GLN B 367                                                      
MASTER      338    0    2   29   20    0    6    6 5641    2   16   58          
END                                                                             

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Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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