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LongText Report for: 6wym-pdb

Name Class
6wym-pdb
HEADER    HYDROLASE                               13-MAY-20   6WYM              
TITLE     TRANSITION METAL INHIBITION AND STRUCTURAL REFINEMENT OF THE M.       
TITLE    2 TUBERCULOSIS ESTERASE, RV0045C                                       
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: POSSIBLE HYDROLASE;                                        
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / 
SOURCE   3 H37RV);                                                              
SOURCE   4 ORGANISM_TAXID: 83332;                                               
SOURCE   5 STRAIN: ATCC 25618 / H37RV;                                          
SOURCE   6 GENE: RV0045C;                                                       
SOURCE   7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21;                            
SOURCE   8 EXPRESSION_SYSTEM_TAXID: 511693;                                     
SOURCE   9 EXPRESSION_SYSTEM_STRAIN: BL21;                                      
SOURCE  10 EXPRESSION_SYSTEM_VARIANT: LOBSTR;                                   
SOURCE  11 EXPRESSION_SYSTEM_PLASMID: PET28                                     
KEYWDS    SERINE ESTERASE, ALLOSTERIC REGULATION, CONFORMATIONAL CHANGE,        
KEYWDS   2 HYDROLASE                                                            
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    M.R.MACBETH,R.J.JOHNSON,G.C.HOOPS                                     
REVDAT   1   19-MAY-21 6WYM    0                                                
JRNL        AUTH   I.E.BOWLES,E.H.POOL,B.S.LANCASTER,E.K.LAWSON,C.P.SAVAS,      
JRNL        AUTH 2 Z.J.KARTJE,L.SEVERINAC,D.H.CHO,M.R.MACBETH,R.J.JOHNSON,      
JRNL        AUTH 3 G.C.HOOPS                                                    
JRNL        TITL   TRANSITION METAL CATION INHIBITION OF MYCOBACTERIUM          
JRNL        TITL 2 TUBERCULOSIS ESTERASE RV0045C.                               
JRNL        REF    PROTEIN SCI.                               2021              
JRNL        REFN                   ESSN 1469-896X                               
JRNL        PMID   33914998                                                     
JRNL        DOI    10.1002/PRO.4089                                             
REMARK   2                                                                      
REMARK   2 RESOLUTION.    2.00 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : REFMAC 5.8.0258                                      
REMARK   3   AUTHORS     : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,              
REMARK   3               : NICHOLLS,WINN,LONG,VAGIN                             
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : MAXIMUM LIKELIHOOD                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 113.12                         
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 81.3                           
REMARK   3   NUMBER OF REFLECTIONS             : 25224                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.209                           
REMARK   3   R VALUE            (WORKING SET) : 0.207                           
REMARK   3   FREE R VALUE                     : 0.250                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 5.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 1344                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : NULL                         
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 2.00                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 2.05                         
REMARK   3   REFLECTION IN BIN     (WORKING SET) : 363                          
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : 15.98                        
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3020                       
REMARK   3   BIN FREE R VALUE SET COUNT          : 23                           
REMARK   3   BIN FREE R VALUE                    : 0.2530                       
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2211                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 1                                       
REMARK   3   SOLVENT ATOMS            : 205                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 27.34                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -0.01000                                             
REMARK   3    B22 (A**2) : -0.01000                                             
REMARK   3    B33 (A**2) : 0.04000                                              
REMARK   3    B12 (A**2) : -0.01000                                             
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED OVERALL COORDINATE ERROR.                                 
REMARK   3   ESU BASED ON R VALUE                            (A): 0.177         
REMARK   3   ESU BASED ON FREE R VALUE                       (A): 0.169         
REMARK   3   ESU BASED ON MAXIMUM LIKELIHOOD                 (A): 0.117         
REMARK   3   ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.406         
REMARK   3                                                                      
REMARK   3 CORRELATION COEFFICIENTS.                                            
REMARK   3   CORRELATION COEFFICIENT FO-FC      : 0.928                         
REMARK   3   CORRELATION COEFFICIENT FO-FC FREE : 0.885                         
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES        COUNT    RMS    WEIGHT      
REMARK   3   BOND LENGTHS REFINED ATOMS        (A):  2255 ; 0.010 ; 0.013       
REMARK   3   BOND LENGTHS OTHERS               (A):  2074 ; 0.001 ; 0.017       
REMARK   3   BOND ANGLES REFINED ATOMS   (DEGREES):  3072 ; 1.728 ; 1.628       
REMARK   3   BOND ANGLES OTHERS          (DEGREES):  4774 ; 1.337 ; 1.571       
REMARK   3   TORSION ANGLES, PERIOD 1    (DEGREES):   290 ; 7.464 ; 5.000       
REMARK   3   TORSION ANGLES, PERIOD 2    (DEGREES):   127 ;29.989 ;21.024       
REMARK   3   TORSION ANGLES, PERIOD 3    (DEGREES):   339 ;16.047 ;15.000       
REMARK   3   TORSION ANGLES, PERIOD 4    (DEGREES):    21 ;21.323 ;15.000       
REMARK   3   CHIRAL-CENTER RESTRAINTS       (A**3):   284 ; 0.067 ; 0.200       
REMARK   3   GENERAL PLANES REFINED ATOMS      (A):  2616 ; 0.008 ; 0.020       
REMARK   3   GENERAL PLANES OTHERS             (A):   499 ; 0.001 ; 0.020       
REMARK   3   NON-BONDED CONTACTS REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED CONTACTS OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   NON-BONDED TORSION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) REFINED ATOMS      (A):  NULL ;  NULL ;  NULL       
REMARK   3   H-BOND (X...Y) OTHERS             (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION REFINED ATOMS (A):  NULL ;  NULL ;  NULL       
REMARK   3   POTENTIAL METAL-ION OTHERS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW REFINED ATOMS        (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY VDW OTHERS               (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND REFINED ATOMS     (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY H-BOND OTHERS            (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION REFINED ATOMS  (A):  NULL ;  NULL ;  NULL       
REMARK   3   SYMMETRY METAL-ION OTHERS         (A):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.     COUNT   RMS    WEIGHT      
REMARK   3   MAIN-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   MAIN-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND REFINED ATOMS  (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN BOND OTHER ATOMS    (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE REFINED ATOMS (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SIDE-CHAIN ANGLE OTHER ATOMS   (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B REFINED ATOMS     (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   LONG RANGE B OTHER ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3 ANISOTROPIC THERMAL FACTOR RESTRAINTS.    COUNT   RMS   WEIGHT       
REMARK   3   RIGID-BOND RESTRAINTS          (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; FREE ATOMS         (A**2):  NULL ;  NULL ;  NULL       
REMARK   3   SPHERICITY; BONDED ATOMS       (A**2):  NULL ;  NULL ;  NULL       
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS STATISTICS                                           
REMARK   3   NUMBER OF DIFFERENT NCS GROUPS : NULL                              
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED : MASK                                                 
REMARK   3   PARAMETERS FOR MASK CALCULATION                                    
REMARK   3   VDW PROBE RADIUS   : 1.20                                          
REMARK   3   ION PROBE RADIUS   : 0.80                                          
REMARK   3   SHRINKAGE RADIUS   : 0.80                                          
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING   
REMARK   3  POSITIONS U VALUES : REFINED INDIVIDUALLY                           
REMARK   4                                                                      
REMARK   4 6WYM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-MAY-20.                  
REMARK 100 THE DEPOSITION ID IS D_1000249212.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 18-JUL-18                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 7.4                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : APS                                
REMARK 200  BEAMLINE                       : 31-ID                              
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.279                              
REMARK 200  MONOCHROMATOR                  : KOHZU HLD-4 DOUBLE CRYSTAL         
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : PIXEL                              
REMARK 200  DETECTOR MANUFACTURER          : DECTRIS PILATUS3 S 6M              
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : XDS                                
REMARK 200  DATA SCALING SOFTWARE          : STARANISO                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 25604                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.998                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 113.120                            
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 88.5                               
REMARK 200  DATA REDUNDANCY                : 18.30                              
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200   FOR THE DATA SET  : 17.8000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 2.12                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 42.3                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 7.00                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200   FOR SHELL         : 1.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER                                                
REMARK 200 STARTING MODEL: 3P2M                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 63.58                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.38                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM MGCL2, 100 MM IMIDAZOLE PH 7.4,   
REMARK 280  18% PEG 4000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K       
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290       4555   Y,X,-Z                                                  
REMARK 290       5555   X-Y,-Y,-Z+2/3                                           
REMARK 290       6555   -X,-X+Y,-Z+1/3                                          
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       16.27133            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       32.54267            
REMARK 290   SMTRY1   4 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   5  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   5  0.000000  0.000000 -1.000000       32.54267            
REMARK 290   SMTRY1   6 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   6 -0.866025  0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   6  0.000000  0.000000 -1.000000       16.27133            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     0                                                      
REMARK 465     GLY A     1                                                      
REMARK 465     SER A     2                                                      
REMARK 465     SER A     3                                                      
REMARK 465     HIS A     4                                                      
REMARK 465     HIS A     5                                                      
REMARK 465     HIS A     6                                                      
REMARK 465     HIS A     7                                                      
REMARK 465     HIS A     8                                                      
REMARK 465     HIS A     9                                                      
REMARK 465     SER A    10                                                      
REMARK 465     SER A    11                                                      
REMARK 465     GLY A    12                                                      
REMARK 465     LEU A    13                                                      
REMARK 465     VAL A    14                                                      
REMARK 465     PRO A    15                                                      
REMARK 465     ARG A    16                                                      
REMARK 465     GLY A    17                                                      
REMARK 465     SER A    18                                                      
REMARK 465     HIS A    19                                                      
REMARK 465     MET A    20                                                      
REMARK 465     ALA A    21                                                      
REMARK 465     SER A    22                                                      
REMARK 465     MET A    23                                                      
REMARK 465     THR A    24                                                      
REMARK 465     GLY A    25                                                      
REMARK 465     GLY A    26                                                      
REMARK 465     GLN A    27                                                      
REMARK 465     GLN A    28                                                      
REMARK 465     MET A    29                                                      
REMARK 465     GLY A    30                                                      
REMARK 465     ARG A    31                                                      
REMARK 465     GLY A    32                                                      
REMARK 465     SER A    33                                                      
REMARK 465     LEU A    34                                                      
REMARK 465     SER A    35                                                      
REMARK 465     ASP A    36                                                      
REMARK 465     ASP A    37                                                      
REMARK 465     THR A   329                                                      
REMARK 465     ARG A   330                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ARG A 205   CB  -  CA  -  C   ANGL. DEV. =  28.8 DEGREES          
REMARK 500    ARG A 205   N   -  CA  -  C   ANGL. DEV. = -21.4 DEGREES          
REMARK 500    ARG A 231   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.0 DEGREES          
REMARK 500    ARG A 294   NE  -  CZ  -  NH2 ANGL. DEV. =  -3.1 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    ALA A 144       49.57   -147.50                                   
REMARK 500    SER A 154     -118.96     42.40                                   
REMARK 500    ARG A 205      176.96    151.30                                   
REMARK 500    PHE A 255     -169.29   -127.41                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 401                  
DBREF  6WYM A   34   330  UNP    I6XU97   I6XU97_MYCTU     2    298             
SEQADV 6WYM MET A    0  UNP  I6XU97              INITIATING METHIONINE          
SEQADV 6WYM GLY A    1  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A    2  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A    3  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A    4  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A    5  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A    6  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A    7  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A    8  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A    9  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A   10  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A   11  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLY A   12  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM LEU A   13  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM VAL A   14  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM PRO A   15  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM ARG A   16  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLY A   17  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A   18  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM HIS A   19  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM MET A   20  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM ALA A   21  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A   22  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM MET A   23  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM THR A   24  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLY A   25  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLY A   26  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLN A   27  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLN A   28  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM MET A   29  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLY A   30  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM ARG A   31  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM GLY A   32  UNP  I6XU97              EXPRESSION TAG                 
SEQADV 6WYM SER A   33  UNP  I6XU97              EXPRESSION TAG                 
SEQRES   1 A  331  MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY          
SEQRES   2 A  331  LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY          
SEQRES   3 A  331  GLY GLN GLN MET GLY ARG GLY SER LEU SER ASP ASP GLU          
SEQRES   4 A  331  LEU THR GLY LEU ASP GLU PHE ALA LEU LEU ALA GLU ASN          
SEQRES   5 A  331  ALA GLU GLN ALA GLY VAL ASN GLY PRO LEU PRO GLU VAL          
SEQRES   6 A  331  GLU ARG VAL GLN ALA GLY ALA ILE SER ALA LEU ARG TRP          
SEQRES   7 A  331  GLY GLY SER ALA PRO ARG VAL ILE PHE LEU HIS GLY GLY          
SEQRES   8 A  331  GLY GLN ASN ALA HIS THR TRP ASP THR VAL ILE VAL GLY          
SEQRES   9 A  331  LEU GLY GLU PRO ALA LEU ALA VAL ASP LEU PRO GLY HIS          
SEQRES  10 A  331  GLY HIS SER ALA TRP ARG GLU ASP GLY ASN TYR SER PRO          
SEQRES  11 A  331  GLN LEU ASN SER GLU THR LEU ALA PRO VAL LEU ARG GLU          
SEQRES  12 A  331  LEU ALA PRO GLY ALA GLU PHE VAL VAL GLY MET SER LEU          
SEQRES  13 A  331  GLY GLY LEU THR ALA ILE ARG LEU ALA ALA MET ALA PRO          
SEQRES  14 A  331  ASP LEU VAL GLY GLU LEU VAL LEU VAL ASP VAL THR PRO          
SEQRES  15 A  331  SER ALA LEU GLN ARG HIS ALA GLU LEU THR ALA GLU GLN          
SEQRES  16 A  331  ARG GLY THR VAL ALA LEU MET HIS GLY GLU ARG GLU PHE          
SEQRES  17 A  331  PRO SER PHE GLN ALA MET LEU ASP LEU THR ILE ALA ALA          
SEQRES  18 A  331  ALA PRO HIS ARG ASP VAL LYS SER LEU ARG ARG GLY VAL          
SEQRES  19 A  331  PHE HIS ASN SER ARG ARG LEU ASP ASN GLY ASN TRP VAL          
SEQRES  20 A  331  TRP ARG TYR ASP ALA ILE ARG THR PHE GLY ASP PHE ALA          
SEQRES  21 A  331  GLY LEU TRP ASP ASP VAL ASP ALA LEU SER ALA PRO ILE          
SEQRES  22 A  331  THR LEU VAL ARG GLY GLY SER SER GLY PHE VAL THR ASP          
SEQRES  23 A  331  GLN ASP THR ALA GLU LEU HIS ARG ARG ALA THR HIS PHE          
SEQRES  24 A  331  ARG GLY VAL HIS ILE VAL GLU LYS SER GLY HIS SER VAL          
SEQRES  25 A  331  GLN SER ASP GLN PRO ARG ALA LEU ILE GLU ILE VAL ARG          
SEQRES  26 A  331  GLY VAL LEU ASP THR ARG                                      
HET     CL  A 401       1                                                       
HETNAM      CL CHLORIDE ION                                                     
FORMUL   2   CL    CL 1-                                                        
FORMUL   3  HOH   *205(H2 O)                                                    
HELIX    1 AA1 LEU A   47  GLY A   56  1                                  10    
HELIX    2 AA2 ASN A   93  THR A   96  5                                   4    
HELIX    3 AA3 TRP A   97  GLY A  105  1                                   9    
HELIX    4 AA4 SER A  128  ALA A  144  1                                  17    
HELIX    5 AA5 SER A  154  ALA A  167  1                                  14    
HELIX    6 AA6 THR A  180  ALA A  199  1                                  20    
HELIX    7 AA7 SER A  209  ALA A  221  1                                  13    
HELIX    8 AA8 ASP A  225  ASN A  236  1                                  12    
HELIX    9 AA9 ASP A  257  LEU A  268  1                                  12    
HELIX   10 AB1 THR A  284  ALA A  295  1                                  12    
HELIX   11 AB2 SER A  310  GLN A  315  1                                   6    
HELIX   12 AB3 GLN A  315  LEU A  327  1                                  13    
SHEET    1 AA1 8 VAL A  64  ALA A  69  0                                        
SHEET    2 AA1 8 ILE A  72  TRP A  77 -1  O  ARG A  76   N  GLU A  65           
SHEET    3 AA1 8 ALA A 108  VAL A 111 -1  O  ALA A 108   N  TRP A  77           
SHEET    4 AA1 8 VAL A  84  LEU A  87  1  N  PHE A  86   O  LEU A 109           
SHEET    5 AA1 8 PHE A 149  MET A 153  1  O  VAL A 151   N  ILE A  85           
SHEET    6 AA1 8 GLU A 173  VAL A 177  1  O  VAL A 177   N  GLY A 152           
SHEET    7 AA1 8 ILE A 272  GLY A 277  1  O  THR A 273   N  LEU A 176           
SHEET    8 AA1 8 PHE A 298  VAL A 304  1  O  ARG A 299   N  ILE A 272           
SHEET    1 AA2 2 SER A 237  ARG A 239  0                                        
SHEET    2 AA2 2 TRP A 245  TRP A 247 -1  O  VAL A 246   N  ARG A 238           
SITE     1 AC1  5 GLY A  90  SER A 154  LEU A 155  HOH A 635                    
SITE     2 AC1  5 HOH A 694                                                     
CRYST1  130.618  130.618   48.814  90.00  90.00 120.00 P 31 2 1      6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.007656  0.004420  0.000000        0.00000                         
SCALE2      0.000000  0.008840  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.020486        0.00000                         
TER    2212      ASP A 328                                                      
MASTER      337    0    1   12   10    0    2    6 2417    1    0   26          
END                                                                             

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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