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Structure Report for: 7YWP

Name|Closed conformation of Oligopeptidase B from Serratia proteomaculans with covalently bound TCK
Revelation date|22-Feb-2023
Family|S9N_PREPL_Peptidase_S9: there are 204 genes in this family, 15 structure(s)
PDB File|ESTHER: header of PDB entry RCSB: Full entry
Petrenko, D.E., Boyko, K.M., Nikolaeva, A.Y., Vlaskina, A.V., Mikhailova, A.G., Timofeev, V.I., Rakitina, T.V.
Ligand|Inhibitor: Tosyl-L-lysine-chloromethyl-ketone Ligand in structure: Ligplot


    Title: Crystal Structure of Inhibitor-Bound Bacterial Oligopeptidase B in the Closed State: Similarity and Difference between Protozoan and Bacterial Enzymes
    Petrenko DE, Karlinsky DM, Gordeeva VD, Arapidi GP, Britikova EV, Britikov VV, Nikolaeva AY, Boyko KM, Timofeev VI and Rakitina TV <3 more author(s)>
    Ref: Int J Mol Sci, 24:, 2023 : PubMed


    Title: The Crystal Structure of Nalpha-p-tosyl-lysyl Chloromethylketone-Bound Oligopeptidase B from Serratia Proteamaculans Revealed a New Type of Inhibitor Binding.
    Timofeev VI, Petrenko DE, Agapova YK, Vlaskina AV, Karlinsky DM, Mikhailova AG, Kuranova IP, Rakitina TV
    Ref: Crystals, 11:1438, 2021 : PubMed


Representative scheme of S9N_PREPL_Peptidase_S9 structure and an image from PDBsum server

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PDB-Sum7YWP Previously Class, Architecture, Topology and Homologous superfamily - PDB-Sum server
FSSP7YWP Fold classification based on Structure-Structure alignment of Proteins - FSSP server
SCOP7YWP Structural Classification Of Protein - SCOP server
PROTEOPEDIA7ywp 3D, interactive encyclopedia of proteins - PROTEOPEDIA server

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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