Kumar, M., Mukherjee, J., Gupta, M.N., Sinha, M., Kaur, P., Sharma, S., Singh, T.P.
Ligand
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Reference
Title: Enhancement of stability of a lipase by subjecting to three phase partitioning (TPP): structures of native and TPP-treated lipase from Thermomyces lanuginosa Kumar M, Mukherjee J, Sinha M, Kaur P, Sharma S, Singh TP, Gupta MN Ref: Sustain Chem Process, 3:14, 2017 : PubMed
Background
The lipase enzyme converts long chain acyltriglycerides into di- and monoglycerides, glycerol and fatty acids. The catalytic site in lipase is situated deep inside the molecule. It is connected through a tunnel to the surface of the molecule. In the unbound state under aqueous conditions, the tunnel remains closed. The tunnel can be opened when the enzyme is exposed to a lipid bilayer or a detergent or many hydrophobic/hydrophilic surfaces.
Results
In the present study, the lipase was subjected to three-phase partitioning (TPP) which consisted of mixing in tert-butanol and ammonium sulphate to the solution of lipase in the aqueous buffer. The enzyme formed an interfacial precipitate between the tert-butanol rich and water rich phases. The stability of the enzyme subjected to TPP was found to be higher (Tm of 80 C) than the untreated enzyme (Tm of 77 C). The activity of the enzyme subjected to TPP (3.3 U/mg) was nearly half of that of the untreated one (5.8 U/mg). However, the activity of the treated enzyme was higher (17.8 U/mg) than the untreated one (8.6 U/mg) when a detergent was incorporated in the assay buffer.
Conclusions
The structure determination showed that the substrate binding site in the treated enzyme was more tightly closed than that of the untreated protein.
        
Representative scheme of Lipase_3 structure and an image from PDBsum server
Databases
PDB-Sum
4ZGB Previously Class, Architecture, Topology and Homologous superfamily - PDB-Sum server
FSSP
4ZGBFold classification based on Structure-Structure alignment of Proteins - FSSP server