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vibch-y1892

Vibrio cholerae; Vibrio mimicus hypothetical protein vc1892

Comment

Other strains: Vibrio cholerae (serotype O1 M66-2\; ATCC 39541 \/ Ogawa 395 \/ O395\; 12129(1)\; V52\; CIRS101\; AM-19226\; B33\; 1587\; TMA 21\; MAK 757\; 2740-80\; 623-39\; NCTC 8457\; RC27\; MZO-2\; CT 5369-93\; RC9\; TM 11079-80\; MO10\; serotype O1 MJ-1236\; INDRE 91\/1\; bv. albensis VL426\; LMA3984-4\; BX 330286\; RC385\; MZO-3\; CP1044(17)\; HC-71A1\; O1 str. NHCC-008D\; HC-59A1\; O1 str. NHCC-006C\; HC-62B1\; O1 str. EDC-022\; HC-50A2\; HE-46\; O1 str. EC-0027\; HC-55C2\; HC-33A2\; HCUF01\; HC-77A1\; HC-1A2\; HC-78A1\; HC-02C1\; HC-49A2\; O1 str. NHCC-004A\; HC-41A1\; CP1038(11)\; CP1041(14)\; O1 str. EM-1626\; O1 str. PCS-022\; HC-43B1\; O1 str. EDC-020\; HE48\; HC-55A1\; HC-59B1\; O1 str. Nep-21113\; HC-22A1\; O1 str. EM-1546\; HC-19A1\; HE-16\; HC-67A1\; O1 str. EM-1676A\; HE-09\; CP1033(6)\; HC-61A1\; O1 str. PCS-023\; HFU-02\; HC-72A2\; HC-06A1\; O1 str. Inaba G4222\; HC-64A1\; HC-69A1\; O1 str. EC-0051\; HC-23A1\; PS15\; HC-7A1\; HC-47A1\; HC-20A2\; HE-45\; HC-55B2\; HC-80A1\; HC-21A1\; O1 str. 95412\; HC-61A2\; CP1037(10)\; O1 str. 87395\; HC-51A1\; O1 str. EM-1727\; O1 str. EC-0012\; CP1042(15)\; HE-25\; HC-40A1\; HC-60A1\; HC-68A1\; O1 str. 2010EL-1786\; HC-57A1\; HC-81A1\; CP1035(8)\; CP1047(20)\; CP1050(23)\; HC-56A2\; HC-39A1\; HC-56A1\; BJG-01\; CP1032(5)\; CP1048(21)\; CP1040(13)\; HC-70A1\; HC-44C1\; HC-37A1\; HC-65A1\; HC-50A1\; HC-17A1\; O1 str. AG-8040\; HC-41B1\; O1 str. 116063\; O1 str. NHCC-010F\; HC-46A1\; HC-02A1\; IEC224\; O1 str. EM-1536\; HC-32A1\; 4260B\; HC-81A2\; HC-17A2\; HC-46B1\; HC-43A1\; HC-42A1\; HC-62A1\; HC-57A2\; HC-38A1\; O1 str. 116059\; O1 str. EC-0009\; HC-28A1\; HC-48A1\; O1 str. Nep-21106\; CP1046(19)\; HE-40\; HC-52A1\; O1 str. AG-7404\; HE39\; CP1030(3)\; HC-48B2\; HC-36A1)\; Vibrio mimicus (CAIM 602\; MB451\; VM603)

Relationship

Family : abh_upf00227

Block : X

Position in NCBI Life Tree : Vibrio cholerae

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

AE004265 CP001233 CP000627 CP001235 ALDG01000217 AGUX02000048 APGC01000070 AJRS01000149 APGB01000052 AJSO01000108 ADAF01000001 APFU01000059 AJRQ01000423 AJRY01000083 APFR01000108 AJRR01000091 AGUP01000051 AFOO01000018 AJRW01000113 AJRO01000011 AGUZ02000149 AJSH01000043 AOMO01000024 AFOM01000018 APGA01000095 ALDN01000106 ALDC01000012 ALDE01000022 APFX01000045 JDTE01000060 ALDP01000016 APFT01000053 AFOR01000015 ALDV01000142 AJSN01000047 APGF01000045 AGUL01000106 APFW01000057 AGUJ01000064 ALEB01000068 AGUV02000054 APFY01000104 AFOP01000155 AJRL01000031 AGUS01000010 APGG01000052 AFOS01000058 AGUY02000111 AGUI01000120 ANNB01000011 AGUT02000052 AJSP01000046 APFS01000121 AGUM01000011 AIJR01000101 AGVA02000011 ALDR01000188 ALDL01000015 ALED01000026 AJSM01000136 AGVB02000134 AGUK01000121 APFM01000060 AJRU01000021 ALDB01000144 APFL01000051 ALDT01000163 APFZ01000120 APFQ01000047 ALDF01000012 ALEC01000007 AFOK01000214 AJRT01000129 AGUW02000058 CP003069 ALDY01000150 AGVC02000007 AJRM01000182 ALDI01000058 ALDK01000212 ALDX01000192 ALDM01000168 ALDW01000127 AFOU01000222 ALDA01000015 ALDJ01000014 ALDD01000188 AFON01000164 AJSK01000046 AJSJ01000127 AGUU02000060 ALDS01000097 AJRN01000436 APFO01000054 AJRP01000055 APFK01000150 APGD01000050 ALDQ01000021 AFOT01000136 CP003330 APFV01000115 AGUO01000051 AMVL01000012 ALEA01000175 AJSI01000122 AJSL01000013 AGUQ01000018 ALDO01000089 AJRV01000050 ALDZ01000191 AFOV01000074 APFJ01000118 APFP01000100 ACYU01000096 AGUN01000126 AFOL01000216 APGE01000102 ALDH01000024 AJRX01000082 ALDU01000237 APFN01000108 AFOQ01000009 ALCZ01000086 AGUR01000173 AXDR01000010

Sequence

Peptide

MIIYLHGFDS NSPGNHEKVL QLQFIDSDVR FINYSTLHPK HDMQHLLKEV HKAIEQSGDP NPLICGVGLG GYWSERIGFL CGIKQVIFNP NLHPELTMQG RIDRPEEYED ISTKCVEKFR AKNQGRCLVI LSRQDEIHDN QKTAQELQDY YDIVWDDTQT HKFKKISHHL QAMKAFKAA

References

Title : Draft Genome Sequence of Vibrio mimicus Strain CAIM 602T - Guardiola-Avila_2013_Genome.Announc_1_e0008413
Author(s) : Guardiola-Avila I , Acedo-Felix E , Noriega-Orozco L , Yepiz-Plascencia G , Sifuentes-Romero I , Gomez-Gil B
Ref : Genome Announc , 1 :e0008413 , 2013
Abstract : Guardiola-Avila_2013_Genome.Announc_1_e0008413
ESTHER : Guardiola-Avila_2013_Genome.Announc_1_e0008413
PubMedSearch : Guardiola-Avila_2013_Genome.Announc_1_e0008413
PubMedID: 23516211
Gene_locus related to this paper: vibch-y1892 , vibmi-u4zh77

Title : Genome Sequence of Vibrio cholerae G4222, a South African Clinical Isolate - le Roux_2013_Genome.Announc_1_e0004013
Author(s) : le Roux WJ , Chan WY , De Maayer P , Venter SN
Ref : Genome Announc , 1 :e0004013 , 2013
Abstract : le Roux_2013_Genome.Announc_1_e0004013
ESTHER : le Roux_2013_Genome.Announc_1_e0004013
PubMedSearch : le Roux_2013_Genome.Announc_1_e0004013
PubMedID: 23516184
Gene_locus related to this paper: vibch-y1892

Title : Genome Sequence of Non-O1 Vibrio cholerae PS15 - Kumar_2013_Genome.Announc_1_E00227
Author(s) : Kumar S , Lindquist IE , Sundararajan A , Rajanna C , Floyd JT , Smith KP , Andersen JL , He G , Ayers RM , Johnson JA , Werdann JJ , Sandoval AA , Mojica NM , Schilkey FD , Mudge J , Varela MF
Ref : Genome Announc , 1 :E00227 , 2013
Abstract : Kumar_2013_Genome.Announc_1_E00227
ESTHER : Kumar_2013_Genome.Announc_1_E00227
PubMedSearch : Kumar_2013_Genome.Announc_1_E00227
PubMedID: 23409261
Gene_locus related to this paper: vibch-y1892

Title : Complete genome sequence of a sucrose-nonfermenting epidemic strain of Vibrio cholerae O1 from Brazil - de Sa Morais_2012_J.Bacteriol_194_2772
Author(s) : de Sa Morais LL , Garza DR , Loureiro EC , Nunes KN , Vellasco RS , da Silva CP , Nunes MR , Thompson CC , Vicente AC , Santos EC
Ref : Journal of Bacteriology , 194 :2772 , 2012
Abstract : de Sa Morais_2012_J.Bacteriol_194_2772
ESTHER : de Sa Morais_2012_J.Bacteriol_194_2772
PubMedSearch : de Sa Morais_2012_J.Bacteriol_194_2772
PubMedID: 22535947
Gene_locus related to this paper: vibch-VC1974 , vibch-y1892

Title : Genome-wide study of the defective sucrose fermenter strain of Vibrio cholerae from the Latin American cholera epidemic - Garza_2012_PLoS.One_7_e37283
Author(s) : Garza DR , Thompson CC , Loureiro EC , Dutilh BE , Inada DT , Junior EC , Cardoso JF , Nunes MR , de Lima CP , Silvestre RV , Nunes KN , Santos EC , Edwards RA , Vicente AC , de Sa Morais LL
Ref : PLoS ONE , 7 :e37283 , 2012
Abstract : Garza_2012_PLoS.One_7_e37283
ESTHER : Garza_2012_PLoS.One_7_e37283
PubMedSearch : Garza_2012_PLoS.One_7_e37283
PubMedID: 22662140
Gene_locus related to this paper: vibch-VC1974 , vibch-y1892

Title : Comparative genomics of Vibrio cholerae from Haiti, Asia, and Africa - Reimer_2011_Emerg.Infect.Dis_17_2113
Author(s) : Reimer AR , Van Domselaar G , Stroika S , Walker M , Kent H , Tarr C , Talkington D , Rowe L , Olsen-Rasmussen M , Frace M , Sammons S , Dahourou GA , Boncy J , Smith AM , Mabon P , Petkau A , Graham M , Gilmour MW , Gerner-Smidt P
Ref : Emerg Infect Dis , 17 :2113 , 2011
Abstract : Reimer_2011_Emerg.Infect.Dis_17_2113
ESTHER : Reimer_2011_Emerg.Infect.Dis_17_2113
PubMedSearch : Reimer_2011_Emerg.Infect.Dis_17_2113
PubMedID: 22099115
Gene_locus related to this paper: vibch-VC1974 , vibch-y1892

Title : Comparative genomics of clinical and environmental Vibrio mimicus - Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134
Author(s) : Hasan NA , Grim CJ , Haley BJ , Chun J , Alam M , Taviani E , Hoq M , Munk AC , Saunders E , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Xie G , Nair GB , Huq A , Colwell RR
Ref : Proc Natl Acad Sci U S A , 107 :21134 , 2010
Abstract : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134
ESTHER : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134
PubMedSearch : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134
PubMedID: 21078967
Gene_locus related to this paper: vibch-VC2610 , vibch-VC2718 , vibch-VCA0688 , vibch-y1892 , vibch-y2276 , vibmi-d0gt41 , vibmi-u4zh77

Title : Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae - Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442
Author(s) : Chun J , Grim CJ , Hasan NA , Lee JH , Choi SY , Haley BJ , Taviani E , Jeon YS , Kim DW , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Munk AC , Chertkov O , Meincke L , Saunders E , Walters RA , Huq A , Nair GB , Colwell RR
Ref : Proc Natl Acad Sci U S A , 106 :15442 , 2009
Abstract : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442
ESTHER : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442
PubMedSearch : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442
PubMedID: 19720995
Gene_locus related to this paper: vibch-lipas , vibch-VC0135 , vibch-VC1418 , vibch-VC1974 , vibch-VC2432 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-y1892 , vibch-y2276

Title : Genomic analysis of a novel integrative conjugative element in Vibrio cholerae - Taviani_2009_FEBS.Lett_583_3630
Author(s) : Taviani E , Grim CJ , Chun J , Huq A , Colwell RR
Ref : FEBS Letters , 583 :3630 , 2009
Abstract : Taviani_2009_FEBS.Lett_583_3630
ESTHER : Taviani_2009_FEBS.Lett_583_3630
PubMedSearch : Taviani_2009_FEBS.Lett_583_3630
PubMedID: 19850044
Gene_locus related to this paper: vibch-lipas , vibch-VC0135 , vibch-VC1418 , vibch-VC2432 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-y1892 , vibch-y2276

Title : A recalibrated molecular clock and independent origins for the cholera pandemic clones - Feng_2008_PLoS.One_3_e4053
Author(s) : Feng L , Reeves PR , Lan R , Ren Y , Gao C , Zhou Z , Cheng J , Wang W , Wang J , Qian W , Li D , Wang L
Ref : PLoS ONE , 3 :e4053 , 2008
Abstract : Feng_2008_PLoS.One_3_e4053
ESTHER : Feng_2008_PLoS.One_3_e4053
PubMedSearch : Feng_2008_PLoS.One_3_e4053
PubMedID: 19115014
Gene_locus related to this paper: vibch-VC1974 , vibch-VC2610 , vibch-VC2718 , vibch-y1892 , vibch-y2276