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Gene_locus Report for: varde-a0a0a7rpj2

Varroa destructor (Honeybee mite). Carboxylic ester hydrolase

Relationship
Family|Cholinesterase-like
Block| C
Position in NCBI Life Tree|Varroa destructor
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Chelicerata: N E > Arachnida: N E > Acari: N E > Parasitiformes: N E > Mesostigmata: N E > Monogynaspida: N E > Gamasina: N E > Dermanyssoidea: N E > Varroidae: N E > Varroa: N E > Varroa destructor: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : KJ499538
1 UniProt : A0A0A7RPJ2
1 UniProt : A0A0A7RPJ2
1 Interpro : A0A0A7RPJ2
1 Pfam : A0A0A7RPJ2
1 PIRSF : A0A0A7RPJ2
1 SUPERFAM : A0A0A7RPJ2
Sequence
Graphical view for this peptide sequence: varde-a0a0a7rpj2
Colored MSA for Cholinesterase-like (raw)
MKISVDMCTAVKYVLFVTVVCFDALQTSIAWSESHIAIDTETPSPLVTTP
SNGMIRGVRVFSKMGRTIDAFIGIPFAQPPVGNLRFKRSQPVKKHTGELN
ATRARPGCLQLEFKYGKIARIDNTDTTEDCLHLNVFAPGKSESAREYEED
SEDTVEDERLPVFIYLYGGAFIWGENQLSVYDGVEFAAEADAIFVAVNYR
VNIFGFLNSTTSAIPGNMALWDQLMAMQWVRDNIAAFGGDPNEVTLGGQS
AGAMSAAFHSYSPLSKGLFKRAFMMSGTSLSAKFTQQTTAEDMIQAITLA
LDCFDADPAVSIKCVLDKPITYRELEGLKRELGTKWYNFAPHSGDALLPY
PIQELHRNKYHIKDMMLGVTQREGDFLFNALQEWLPNLAGGLESSPESTI
RLLIKMLFGVSIQDTGRIFKAYLLPTDKDPLPHDRLLQVGSDIVSHGIFE
CPAQFFAEHAASQGVNVRYYVYAHMPSFRINLNLGRESTHNDDIPFLLGS
INAVQENIKAYGMKTPSFFIDVQKKTSPEEHHFSRVIVKQISHFMKTG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKISVDMCTAVKYVLFVTVVCFDALQTSIAWSESHIAIDTETPSPLVTTP
SNGMIRGVRVFSKMGRTIDAFIGIPFAQPPVGNLRFKRSQPVKKHTGELN
ATRARPGCLQLEFKYGKIARIDNTDTTEDCLHLNVFAPGKSESAREYEED
SEDTVEDERLPVFIYLYGGAFIWGENQLSVYDGVEFAAEADAIFVAVNYR
VNIFGFLNSTTSAIPGNMALWDQLMAMQWVRDNIAAFGGDPNEVTLGGQS
AGAMSAAFHSYSPLSKGLFKRAFMMSGTSLSAKFTQQTTAEDMIQAITLA
LDCFDADPAVSIKCVLDKPITYRELEGLKRELGTKWYNFAPHSGDALLPY
PIQELHRNKYHIKDMMLGVTQREGDFLFNALQEWLPNLAGGLESSPESTI
RLLIKMLFGVSIQDTGRIFKAYLLPTDKDPLPHDRLLQVGSDIVSHGIFE
CPAQFFAEHAASQGVNVRYYVYAHMPSFRINLNLGRESTHNDDIPFLLGS
INAVQENIKAYGMKTPSFFIDVQKKTSPEEHHFSRVIVKQISHFMKTG


Reference
    Title: Protecting honey bees: identification of a new varroacide by in silico, in vitro, and in vivo studies
    Dulin F, Zatylny-Gaudin C, Ballandonne C, Guillet B, Bonafos R, Bureau R, Halm MP
    Ref: Parasitol Res, 113:4601, 2014 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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