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Gene_locus Report for: teth8-Q5SI36

Putative uncharacterized protein TTHA1544

Comment
The adjacent gene TTHA1545 is complementary (C-term) to this sequence but not in the same frame and not in the right order


Relationship
Family|TTHA1544-like
Block| X
Position in NCBI Life Tree|Thermus thermophilus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Deinococcus-Thermus: N E > Deinococci: N E > Thermales: N E > Thermaceae: N E > Thermus: N E > Thermus thermophilus: N E


Molecular evidence
Database
No mutation
1 structure:
2DST: Structure of the minimized alpha/beta-hydrolase fold protein from Thermus thermophilus HB8
No kinetic





No Substrate
No inhibitor
3 Genbank : YP_144810, AP008226, BAD71367
2 UniProt : Q72IF4, Q5SI36
1 Structure : 2DST
2 UniProt : Q5SI36, Q72IF4
2 Interpro : Q5SI36, Q72IF4
2 Pfam : Q5SI36, Q72IF4
2 PIRSF : Q5SI36, Q72IF4
2 SUPERFAM : Q5SI36, Q72IF4
Sequence
Graphical view for this peptide sequence: teth8-Q5SI36
Colored MSA for TTHA1544-like (raw)
MRRAGYLHLYGLNLVFDRVGKGPPVLLVAEEASRWPEALPEGYAFYLLDL
PGYGRTEGPRMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEAL
GLRALPAEGVEVAEVLSSKLSYGNIDLGGNL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRRAGYLHLYGLNLVFDRVGKGPPVLLVAEEASRWPEALPEGYAFYLLDL
PGYGRTEGPRMAPEELAHFVAGFAVMMNLGAPWVLLRGLGLALGPHLEAL
GLRALPAEGVEVAEVLSSKLSYGNIDLGGNL


Reference
    Title: Structure of the minimized alpha/beta-hydrolase fold protein from Thermus thermophilus HB8
    Xie Y, Takemoto C, Kishishita S, Uchikubo-Kamo T, Murayama K, Chen L, Liu ZJ, Wang BC, Manzoku M and Yokoyama S <3 more author(s)>
    Ref: Acta Crystallographica Sect F Struct Biol Cryst Commun, 63:993, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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