Gene_locus Report for: strco-MMYT Streptomyces coelicolor putative thioesterase, mmyt
Comment
Other strains: Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Streptomycetales: N E > Streptomycetaceae: N E > Streptomyces: N E > Streptomyces albidoflavus group: N E > Streptomyces coelicolor: N E 6_AlphaBeta_hydrolase :
strco-2SCG18.11 Streptomyces coelicolor putative hydrolase ,
strco-ORF3 Streptomyces coelicolor hypothetical protein (putative carboxylesterase) ,
strco-SC1F2.09c Streptomyces coelicolor cosmid 1F2. SC1F2.09c ,
strco-SC3A4.21C Streptomyces coelicolor putative hydrolase ,
strco-SC4B10.33 Streptomyces coelicolor gene SC4B10.33 ,
strco-SC5E9.25c Streptomyces coelicolor SC5E9.25c ,
strco-SC6G4.24 Streptomyces coelicolor SC6G4.24 ,
strco-SC7A12.12 Streptomyces coelicolor SC7A12.12 ,
strco-SC7H1.13 Streptomyces coelicolor cosmid SC7H1.13 ,
strco-SC66T3.10C Streptomyces coelicolor hypothetical 33.9 kda protein ,
strco-SCD65.22C Streptomyces coelicolor putative hydrolase ,
strco-SCE29.02 Streptomyces coelicolor SCE29.02 ,
strco-SCE87.22c Streptomyces coelicolor SCE87.22c ,
strco-SCF1.09 Streptomyces coelicolor SCF1.09 ,
strco-SCF51A.05 Streptomyces coelicolor SCF51A.05. putative hydrolase ,
strco-SCF56.19 Streptomyces coelicolor hypothetical 31.2 kda protein ,
strco-SCF76.10 Streptomyces coelicolor SCF76.10 ,
strco-SCI8.28C Streptomyces coelicolor putative secreted protein ,
strco-SCM10.27c Streptomyces coelicolor SCM10.27c ,
strco-SCO0047 Streptomyces coelicolor putative transcriptional regulator ,
strco-SCO0135 Streptomyces coelicolor hypothetical protein sco0135 ,
strco-SCO4900 Streptomyces coelicolor hypothetical protein sco4900 ,
strco-SCO5489 Streptomyces coelicolor hypothetical protein ,
strco-SCO7121 Streptomyces coelicolor putative secreted protein ,
strco-SCP8.28C Streptomyces coelicolor putative hydrolase ,
strco-SCP8.35 Streptomyces coelicolor SCP8.35 possible hydrolase f58b .
A85-Est-Putative :
strco-SCO3396 Streptomyces coelicolor, Streptomyces lividans, putative membrane protein .
A85-IroE-IroD-Fes-Yiel :
strco-SCO0490 Streptomyces coelicolor Streptomyces lividans putative esterase .
A85-Mycolyl-transferase :
strco-SC1F2.06 Streptomyces coelicolor putative secreted protein .
Acetyl-esterase_deacetylase :
strco-SCO7057 Streptomyces coelicolor, Streptomyces lividans, Streptomyces ambofaciens, putative esterase .
Aclacinomycin-methylesterase_RdmC :
strco-SCM1.11 Streptomyces coelicolor SCM1.11 .
AlphaBeta_hydrolase :
strco-SCC53.23 Streptomyces coelicolor putative hydrolase ,
strco-SCG11A.06c Streptomyces coelicolor SCG11A.06c ,
strco-SCJ33.09 Streptomyces coelicolor putative secreted protein ,
strco-SCO4160 Streptomyces coelicolor putative hydrolase .
CarbLipBact_2 :
strco-SCO2123 Streptomyces coelicolor Streptomyces lividans putative esterase/lipasehyper-thermostable and alkali-stable .
Carbon-carbon_bond_hydrolase :
strco-SCO5986 Streptomyces coelicolor putative oxidoreductase .
Carboxymethylbutenolide_lactonase :
strco-SC3A7.07 Streptomyces coelicolor SC3A7.07 ,
strco-SC4C6.07C Streptomyces coelicolor; Streptomyces lividans decarboxylase .
Carb_B_Bacteria :
strco-cxest Streptomyces coelicolor, Streptomyces lividans, Streptomyces coelicoflavus; Streptomyces sp., gene SC9B2.14 of cosmid 9B2 ,
strco-cxest2 Streptomyces coelicolor gene SC5G9.30 of cosmid 5G9 ,
strco-SCBAC20F6.10 Streptomyces coelicolor; Streptomyces lividans; Streptomyces sp., probable carboxylesterase ,
strco-SCD95A Streptomyces coelicolor; Streptomyces lividans; Streptomyces sp., gene SCD95A.31 of cosmid D95A .
CFTR-inhibitory-factor_Cif :
strco-2SCG4.13 Streptomyces coelicolor 2SCG4.13 Scoeh6 ,
strco-SC6D11.36C Streptomyces coelicolor putative hydrolase .
Chlorophyllase :
strco-SC2H12.32 Streptomyces coelicolor putative secreted protein ,
strco-SCE8.12C Streptomyces coelicolor putative lipase ,
strco-SCO0503 Streptomyces coelicolor; Streptomyces sp.; Streptomyces lividans hypothetical protein sco0503 .
Dienelactone_hydrolase :
strco-2SCD46.33 Streptomyces coelicolor putative hydrolase (dienelactone hydrolase family) ,
strco-SC4A10.02C Streptomyces coelicolor hypothetical 21.4 kda protein ,
strco-SC9H11.13C Streptomyces coelicolor putative hydrolase ,
strco-SCJ9A.33C Streptomyces coelicolor, Streptomyces lividans, hypothetical 26.1 kda protein .
DPP4N_Peptidase_S9 :
strco-SC9E12.07C Streptomyces coelicolor, Streptomyces lividans, putative peptidase .
Duf_1023 :
strco-q9f2m1 Streptomyces coelicolor Streptomyces lividans TK24 putative secreted protein ,
strco-q9rdq9 Streptomyces coelicolor Streptomyces lividans TK24 putative secreted protein ,
strco-q9x8r0 Streptomyces coelicolor Streptomyces lividans TK24 hypothetical protein sco3643 .
Epoxide_hydrolase :
strco-SC1G7.03 Streptomyces coelicolor cosmid 1G7.SC1G7.03 putative epoxide hydrolase ,
strco-SC4B10.1 Streptomyces coelicolor gene SC4B10.1 ,
strco-SCD10.27 Streptomyces coelicolor putative hydrolase ,
strco-SCE6.23C Streptomyces coelicolor putative hydrolase ,
strco-SCF11.06 Streptomyces coelicolor SCF11.06 ,
strco-SCH5.29 Streptomyces coelicolor putative hydrolase ,
strco-SCH17.08C Streptomyces coelicolor putative epoxide hydrolase .
Est9X :
strco-estli Streptomyces coelicolor cosmid H10.SCH10.22c LipM EstC .
Esterase_phb :
strco-SCO3772 Streptomyces coelicolor putative secreted protein .
Fungal-Bact_LIP :
strco-SCO7396 Streptomyces coelicolor, Streptomyces lividans, putative secreted protein .
Haloacetate_dehalogenase :
strco-SC2H12.04 Streptomyces coelicolor SC2H12.04 ,
strco-SCM1.32 Streptomyces coelicolor SCM1.32 putative hydrolase .
Haloperoxidase :
strco-SCF76.05c Streptomyces coelicolor SCF76.05c non-heme chloroperoxidase (EC 1.11.1.10) (chloride peroxidase) .
HNLyase_Bact :
strco-SC6C5.11 Streptomyces coelicolor hypothetical 34.6 kda protein ,
strco-SCD10.24 Streptomyces coelicolor SCD10.24 ,
strco-SCO0556.1 Streptomyces coelicolor hypothetical protein scf73.03c ,
strco-SCO6351 Streptomyces coelicolor hypothetical protein sco6351 ,
strco-SCO7609 Streptomyces coelicolor putative esterase .
Hormone-sensitive_lipase_like :
strco-ester Streptomyces coelicolor, Streptomyces lividans, SCE9.22, SCO3415 probable esterase ,
strco-SC4B10.32 Streptomyces coelicolor gene SC4B10.32 ,
strco-SCO0556.2 Streptomyces coelicolor hypothetical protein scf73.03c-2 .
Lactobacillus_peptidase :
strco-SCF34.20C Streptomyces coelicolor hypothetical 69.9 kda protein .
Lipase_2 :
strco-SCD63A.10C Streptomyces coelicolor putative secreted lipase ,
strco-SCI11.24C Streptomyces coelicolor putative secreted lipase ,
strco-SCO1265 Streptomyces coelicolor; Streptomyces lividans TK64; putative lipase .
LipSM54-like_FamXVI :
strco-SCO2723 Streptomyces coelicolor putative abc transporter atp-binding protein .
Monoglyceridelipase_lysophospholip :
strco-SC6F7.19C Streptomyces coelicolor, Streptomyces lividans TK24, putative lipase .
NLS3-Tex30 :
strco-SCO5215 Streptomyces coelicolor, Streptomyces lividans hypothetical protein sco5215 .
PAF-Acetylhydrolase :
strco-SCD19.23c Streptomyces coelicolor SCD19.23c, possible lipase .
Peptidase_S37 :
strco-SCO2761 Streptomyces coelicolor; Streptomyces lividans; Streptomyces luteus; Streptomyces sp.; Streptomyces ambofaciens; Streptomyces coelicoflavus; Streptomyces parvulus; Streptomyces olivaceus secreted tripeptidyl aminopeptidase .
PMH_Peptidase_S9 :
strco-SCO6488 Streptomyces coelicolor Streptomyces lividans TK24 putative acyl-peptide hydrolase .
Polyesterase-lipase-cutinase :
strco-LIPA Streptomyces coelicolor lipase .
Proline_iminopeptidase :
strco-SC7H2.03c Streptomyces coelicolor, Streptomyces lividans, SC7H2.03c aminopeptidase (pap) ,
strco-SCF43.16C Streptomyces coelicolor, Streptomyces ambofaciens, Streptomyces lividans, putative prolyl aminopeptidase .
Prolyl_oligopeptidase_S9 :
strco-SC66T3.21C Streptomyces coelicolor Streptomyces lividans TK24 putative peptide hydrolase .
RsbQ-like :
strco-SCH35.34C Streptomyces coelicolor putative hydrolase .
Thioesterase :
strco-SC1A6.21 Streptomyces coelicolor, Streptomyces lividans, 148.8 kda protein Thioesterase domain ,
strco-SC3F7.14 ,
strco-SC4C2.18 Streptomyces coelicolor, Streptomyces griseoflavus, Streptomyces lividans, putative non-ribosomal peptide synthase ,
strco-SC4C2.22 Streptomyces coelicolor putative thioesterase ,
strco-SCE63.01 Streptomyces coelicolor, Streptomyces lividans, cda peptide synthetase III (fragment)cdaPS3 ,
strco-SCOT Streptomyces coelicolor thioesterase II .
Tiancimycin-TnmK-Tripeptidase-HIP :
strco-2SC3B6.03C Streptomyces coelicolor peptidase ,
strco-2SC3B6.04C Streptomyces coelicolor putative peptidase ,
strco-SC1B5.03C Streptomyces coelicolor putative secreted protease ,
strco-SC5H1.36 Streptomyces coelicolor putative protease ,
strco-SC9C7.15C Streptomyces coelicolor putative secreted peptidase ,
strco-SC10F4.23 Streptomyces coelicolor, Streptomyces lividans, putative secreted hydrolase ,
strco-SCD8A.14C Streptomyces coelicolor hypothetical 56.8 kda protein ,
strco-SCO2516 Streptomyces coelicolor putative secreted protein ,
strco-TAP Streptomyces coelicolor, Streptomyces lividans, putative secreted tripeptidylaminopeptidase Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can
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(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) Streptomyces coelicolor A3(2):
N ,
E .
Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: strco-MMYT Colored MSA for Thioesterase (raw)
MRLFCFHHAGGQGTAFLGWQKRLGARAEVIPVRLPPPEDVSAETADGSGM
SMTLVVASLDHELGPMLRRPFLFYGHSMGALVAYHLTRLRQSRGRPLPER
LLIGAYPAPHLPHRLAHCTHLPDEDLLALLPPHPAGHSRLLRQAPGLATA
TAARLRLHLGLCDSAAPAAPNPAQHTGHGSPQGRSEPLRCPVDVFTGISD
PLVTDAEAAAWRHHTRAGCRIHRIPGGHFFTRETPESRAAFFDRLCTVLA
GPSEWAAGASGPLPVTVAS
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M R L F C F H H A G G Q G T A F L G W Q K R L G A R A E V I P V R L P P P E D V S A E T A D G S G M S M T L V V A S L D H E L G P M L R R P F L F Y G H S M G A L V A Y H L T R L R Q S R G R P L P E R L L I G A Y P A P H L P H R L A H C T H L P D E D L L A L L P P H P A G H S R L L R Q A P G L A T A T A A R L R L H L G L C D S A A P A A P N P A Q H T G H G S P Q G R S E P L R C P V D V F T G I S D P L V T D A E A A A W R H H T R A G C R I H R I P G G H F F T R E T P E S R A A F F D R L C T V L A G P S E W A A G A S G P L P V T V A S
References
1 more
Title: Cloning and physical mapping of the EcoRI fragments of the giant linear plasmid SCP1.Redenbach M , Ikeda K , Yamasaki M , Kinashi H Ref: Journal of Bacteriology, 180 :2796, 1998 : PubMed Abstract Title: Nucleotide sequence analysis reveals similarities between proteins determining methylenomycin A resistance in Streptomyces and tetracycline resistance in eubacteria.Neal RJ , Chater KF Ref: Gene, 58 :229, 1987 : PubMed Abstract Title: Resistance, regulatory and production genes for the antibiotic methylenomycin are clustered.Chater KF , Bruton CJ Ref: EMBO Journal, 4 :1893, 1985 : PubMed Abstract 1 less
Title: Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)Bentley SD , Chater KF , Cerdeno-Tarraga AM , Challis GL , Thomson NR , James KD , Harris DE , Quail MA , Kieser H and Hopwood DA <33 more author(s)> Bentley SD , Chater KF , Cerdeno-Tarraga AM , Challis GL , Thomson NR , James KD , Harris DE , Quail MA , Kieser H , Harper D , Bateman A , Brown S , Chandra G , Chen CW , Collins M , Cronin A , Fraser A , Goble A , Hidalgo J , Hornsby T , Howarth S , Huang CH , Kieser T , Larke L , Murphy L , Oliver K , O'Neil S , Rabbinowitsch E , Rajandream MA , Rutherford K , Rutter S , Seeger K , Saunders D , Sharp S , Squares R , Squares S , Taylor K , Warren T , Wietzorrek A , Woodward J , Barrell BG , Parkhill J , Hopwood DA (- 33) Ref: Nature, 417 :141, 2002 : PubMed Abstract ESTHER: Bentley_2002_Nature_417_141 PubMedSearch: Bentley 2002 Nature 417 141 PubMedID: 12000953 Gene_locus related to this paper: strco-cxest ,
strco-cxest2 ,
strco-ester ,
strco-estli ,
strco-MMYT ,
strco-ORF3 ,
strco-q9f2m1 ,
strco-q9rdq9 ,
strco-q9x8r0 ,
strco-SC1A6.21 ,
strco-SC3F7.14 ,
strco-SC4C2.18 ,
strco-SC10F4.23 ,
strco-SCBAC20F6.10 ,
strco-SCD95A ,
strco-SCE8.12C ,
strco-SCE63.01 ,
strco-SCF43.16C ,
strco-SCJ9A.33C ,
strco-SCO0047 ,
strco-SCO0135 ,
strco-SCO0490 ,
strco-SCO0503 ,
strco-SCO0556.1 ,
strco-SCO0556.2 ,
strco-SCO1265 ,
strco-SCO2123 ,
strco-SCO2516 ,
strco-SCO2723 ,
strco-SCO2761 ,
strco-SCO3396 ,
strco-SCO3772 ,
strco-SCO4160 ,
strco-SCO4900 ,
strco-SCO5215 ,
strco-SCO5489 ,
strco-SCO5986 ,
strco-SCO6351 ,
strco-SCO6488 ,
strco-SCO7057 ,
strco-SCO7121 ,
strco-SCO7396 ,
strco-SCO7609 ,
strco-SCOT ,
strco-SLPD ,
strco-TAP Abstract
Streptomyces coelicolor is a representative of the group of soil-dwelling, filamentous bacteria responsible for producing most natural antibiotics used in human and veterinary medicine. Here we report the 8,667,507 base pair linear chromosome of this organism, containing the largest number of genes so far discovered in a bacterium. The 7,825 predicted genes include more than 20 clusters coding for known or predicted secondary metabolites. The genome contains an unprecedented proportion of regulatory genes, predominantly those likely to be involved in responses to external stimuli and stresses, and many duplicated gene sets that may represent 'tissue-specific' isoforms operating in different phases of colonial development, a unique situation for a bacterium. An ancient synteny was revealed between the central 'core' of the chromosome and the whole chromosome of pathogens Mycobacterium tuberculosis and Corynebacterium diphtheriae. The genome sequence will greatly increase our understanding of microbial life in the soil as well as aiding the generation of new drug candidates by genetic engineering.
Title: Cloning and physical mapping of the EcoRI fragments of the giant linear plasmid SCP1.Redenbach M , Ikeda K , Yamasaki M , Kinashi H Ref: Journal of Bacteriology, 180 :2796, 1998 : PubMed Abstract Title: Nucleotide sequence analysis reveals similarities between proteins determining methylenomycin A resistance in Streptomyces and tetracycline resistance in eubacteria.Neal RJ , Chater KF Ref: Gene, 58 :229, 1987 : PubMed Abstract Title: Resistance, regulatory and production genes for the antibiotic methylenomycin are clustered.Chater KF , Bruton CJ Ref: EMBO Journal, 4 :1893, 1985 : PubMed Abstract
Other Papers
Streptomyces coelicolor RedJ-Thioesterase