sphpi-linb
Sphingomonas paucimobilis (Pseudomonas paucimobilis); Sphingomonas sp., Sphingobium (japonicum ummariense indicum), Pseudomonas aeruginosa, LinB
Comment
Other strains: Sphingomonas paucimobilis (Pseudomonas paucimobilis) Sphingobium japonicum (strain NBRC 101211 \/ UT26S)\; Pseudomonas aeruginosa, Sphingomonas sp. (MM-1\; SS04-3\; HZ-1\; P21\; P8\; P1\; P12\; BHC-A\; P7\; NM05) Sphingobium sp. (NM05\; MI1205\; SS04-4\; SS04-1\; SS04-5\; HDIP04)\; Plasmid pLB1 1,4-TCDN\; Sphingobium japonicum\; Sphingobium ummariense RL-3, Sphingobium indicum B90A, uncultured bacterium, Xanthomonas sp. ICH12 (P51698 LINB_SPHPI obsolete entry)
Relationship
Family : Haloalkane_dehalogenase-HLD2
Block : X
Position in NCBI Life Tree : Sphingomonas paucimobilis
Molecular evidence
No mutation
No kinetic
No disease
1,3,4,6-Tetrachloro-1,4-cyclohexadiene
Lindane
1-Chlorobutane
1-Chlorohexane
1-Bromobutane
1-Iodopropane
1-Iodohexane
1-Iodobutane
1,3-dichloropropane
1,5-dichloropentane
1-Bromo-3-Chloropropane
1,3-diiodopropane
2-Iodobutane
2-Bromo-1-Chloropropane
1-Chloro-2-(2-chloroethoxy)ethane
Chlorocyclohexane
Bromocyclohexane
(Bromomethyl)cylcohexane
1-Bromo-2-chloroethane
Chlorocyclopentane
4-Bromobutanenitrile
1,2,3-Tribromopropane
1,2-Dibromo-3-Chloropropane
3-Chloro-2-methylprop-1-ene
2,3-Dichloroprop-1-ene
2,3-dibromopropene
1,2-dichloropropane
1,2-dibromopropane
1-bromohexane
1,3-dibromopropane
1,2-dibromoethane
1,2-dichloroethane
No inhibitor
Database
D14594
DQ767899
AP010803
AY903216
EF514236
AB549722
AB304079
GQ915275
FJ966202
FJ966200
FJ966198
FJ966201
BAA03443
EF514239
AB278602
AB244976
AB302168
AB304076
AB304080
AB304077
AB304081
HQ385915
HQ385916
HQ385917
HQ385918
ATDO01000046
ATDO01000034
AUWY01000037
AB304078
AY331259
DQ246619
FJ966199
AJXQ01000022
DQ910544
Sequence
Peptide
MSLGAKPFGE KKFIEIKGRR MAYIDEGTGD PILFQHGNPT SSYLWRNIMP HCAGLGRLIA CDLIGMGDSD KLDPSGPERY AYAEHRDYLD ALWEALDLGD RVVLVVHDWG SALGFDWARR HRERVQGIAY MEAIAMPIEW ADFPEQDRDL FQAFRSQAGE ELVLQDNVFV EQVLPGLILR PLSEAEMAAY REPFLAAGEA RRPTLSWPRQ IPIAGTPADV VAIARDYAGW LSESPIPKLF INAEPGALTT GRMRDFCRTW PNQTEITVAG AHFIQEDSPD EIGAAIAAFV RRLRPA
References
| Title : Description of Transport Tunnel in Haloalkane Dehalogenase Variant LinB D147C+L177C from Sphingobium japonicum - Iermak_2021_Catalysts_11_5 |
| Author(s) : Iermak I , Degtjarik O , Havlickova P , Kuty M , Chaloupkova R , Damborsky J , Prudnikova T , Smatanova IK |
| Ref : Catalysts , 11 :5 , 2021 |
| Abstract : Iermak_2021_Catalysts_11_5 |
| ESTHER : Iermak_2021_Catalysts_11_5 |
| PubMedSearch : Iermak_2021_Catalysts_11_5 |
| PubMedID: |
| Gene_locus related to this paper: sphpi-linb |
| Title : Substrate inhibition by the blockage of product release and its control by tunnel engineering - Kokkonen_2021_RSC.Chem.Biol_2_645 |
| Author(s) : Kokkonen P , Beier A , Mazurenko S , Damborsky J , Bednar D , Prokop Z |
| Ref : RSC Chemical Biology , 2 :645 , 2021 |
| Abstract : Kokkonen_2021_RSC.Chem.Biol_2_645 |
| ESTHER : Kokkonen_2021_RSC.Chem.Biol_2_645 |
| PubMedSearch : Kokkonen_2021_RSC.Chem.Biol_2_645 |
| PubMedID: 34458806 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Transformation of short-chain chlorinated paraffins and olefins with the bacterial dehalogenase LinB from Sphingobium Indicum - Kinetic models for the homologue-specific conversion of reactive and persistent material - Knobloch_2021_Chemosphere_283_131199 |
| Author(s) : Knobloch MC , Schinkel L , Kohler HE , Mathis F , Kern S , Bleiner D , Heeb NV |
| Ref : Chemosphere , 283 :131199 , 2021 |
| Abstract : Knobloch_2021_Chemosphere_283_131199 |
| ESTHER : Knobloch_2021_Chemosphere_283_131199 |
| PubMedSearch : Knobloch_2021_Chemosphere_283_131199 |
| PubMedID: 34153917 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Protocol for in-vitro purification and refolding of hexachlorocyclohexane degrading enzyme haloalkane dehalogenase LinB from inclusion bodies - Kaur_2021_Enzyme.Microb.Technol_146_109760 |
| Author(s) : Kaur J , Singh A , Panda AK , Lal R |
| Ref : Enzyme Microb Technol , 146 :109760 , 2021 |
| Abstract : Kaur_2021_Enzyme.Microb.Technol_146_109760 |
| ESTHER : Kaur_2021_Enzyme.Microb.Technol_146_109760 |
| PubMedSearch : Kaur_2021_Enzyme.Microb.Technol_146_109760 |
| PubMedID: 33812559 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Engineering a de novo transport tunnel - Brezovsky_2016_ACS.Catal_6_7597 |
| Author(s) : Brezovsky J , Babkova P , Degtjarik O , Fortova A , Gora A , Iermak I , Rezacova P , Dvorak P , Kuta-Smatanova I , Prokop Z , Chaloupkova R , Damborsky J |
| Ref : ACS Catal , 6 :7597 , 2016 |
| Abstract : Brezovsky_2016_ACS.Catal_6_7597 |
| ESTHER : Brezovsky_2016_ACS.Catal_6_7597 |
| PubMedSearch : Brezovsky_2016_ACS.Catal_6_7597 |
| PubMedID: |
| Gene_locus related to this paper: sphpi-linb |
| Title : Draft Genome Sequence of Sphingobium sp. Strain HDIPO4, an Avid Degrader of Hexachlorocyclohexane - Mukherjee_2013_Genome.Announc_1_e00749 |
| Author(s) : Mukherjee U , Kumar R , Mahato NK , Khurana JP , Lal R |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Mukherjee_2013_Genome.Announc_1_e00749 |
| ESTHER : Mukherjee_2013_Genome.Announc_1_e00749 |
| PubMedSearch : Mukherjee_2013_Genome.Announc_1_e00749 |
| PubMedID: 24051321 |
| Gene_locus related to this paper: sphju-d4z7y1 , sphju-d4z363 , sphpi-linb |
| Title : Differences in crystallization of two LinB variants from Sphingobium japonicum UT26 - Degtjarik_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_284 |
| Author(s) : Degtjarik O , Chaloupkova R , Rezacova P , Kuty M , Damborsky J , Kuta Smatanova I |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 69 :284 , 2013 |
| Abstract : Degtjarik_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_284 |
| ESTHER : Degtjarik_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_284 |
| PubMedSearch : Degtjarik_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_284 |
| PubMedID: 23519805 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Draft Genome Sequence of Sphingobium ummariense Strain RL-3, a Hexachlorocyclohexane-Degrading Bacterium - Kohli_2013_Genome.Announc_1_e00956 |
| Author(s) : Kohli P , Dua A , Sangwan N , Oldach P , Khurana JP , Lal R |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Kohli_2013_Genome.Announc_1_e00956 |
| ESTHER : Kohli_2013_Genome.Announc_1_e00956 |
| PubMedSearch : Kohli_2013_Genome.Announc_1_e00956 |
| PubMedID: 24233594 |
| Gene_locus related to this paper: sphpi-linb , 9sphn-t0kby4 , 9sphn-t0kfu7 , sphpi-a0a197bwy5 , 9sphn-t0jaw2 |
| Title : Genome sequence of Sphingobium indicum B90A, a hexachlorocyclohexane-degrading bacterium - Anand_2012_J.Bacteriol_194_4471 |
| Author(s) : Anand S , Sangwan N , Lata P , Kaur J , Dua A , Singh AK , Verma M , Khurana JP , Khurana P , Mathur S , Lal R |
| Ref : Journal of Bacteriology , 194 :4471 , 2012 |
| Abstract : Anand_2012_J.Bacteriol_194_4471 |
| ESTHER : Anand_2012_J.Bacteriol_194_4471 |
| PubMedSearch : Anand_2012_J.Bacteriol_194_4471 |
| PubMedID: 22843598 |
| Gene_locus related to this paper: sphju-d4z363 , sphpi-linb |
| Title : Substrate specificity of haloalkane dehalogenases - Koudelakova_2011_Biochem.J_435_345 |
| Author(s) : Koudelakova T , Chovancova E , Brezovsky J , Monincova M , Fortova A , Jarkovsky J , Damborsky J |
| Ref : Biochemical Journal , 435 :345 , 2011 |
| Abstract : Koudelakova_2011_Biochem.J_435_345 |
| ESTHER : Koudelakova_2011_Biochem.J_435_345 |
| PubMedSearch : Koudelakova_2011_Biochem.J_435_345 |
| PubMedID: 21294712 |
| Gene_locus related to this paper: agrtu-DHAA , brael-e2rv62 , braja-dhaa , myctu-linb , myctu-Rv1833c , rhoba-DHLA , rhoso-halo1 , sphpi-linb , xanau-halo1 |
| Title : The lin genes for gamma-hexachlorocyclohexane degradation in Sphingomonas sp. MM-1 proved to be dispersed across multiple plasmids - Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| Author(s) : Tabata M , Endo R , Ito M , Ohtsubo Y , Kumar A , Tsuda M , Nagata Y |
| Ref : Biosci Biotechnol Biochem , 75 :466 , 2011 |
| Abstract : Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| ESTHER : Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| PubMedSearch : Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| PubMedID: 21389627 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Complete genome sequence of the representative gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26 - Nagata_2010_J.Bacteriol_192_5852 |
| Author(s) : Nagata Y , Ohtsubo Y , Endo R , Ichikawa N , Ankai A , Oguchi A , Fukui S , Fujita N , Tsuda M |
| Ref : Journal of Bacteriology , 192 :5852 , 2010 |
| Abstract : Nagata_2010_J.Bacteriol_192_5852 |
| ESTHER : Nagata_2010_J.Bacteriol_192_5852 |
| PubMedSearch : Nagata_2010_J.Bacteriol_192_5852 |
| PubMedID: 20817768 |
| Gene_locus related to this paper: psepa-q6vpf3 , sphju-d4z1p3 , sphju-d4z3u6 , sphpi-linb , sphju-d4yyy8 |
| Title : Genetic diversity of gamma-hexachlorocyclohexane-degrading sphingomonads isolated from a single experimental field - Yamamoto_2009_Lett.Appl.Microbiol_49_472 |
| Author(s) : Yamamoto S , Otsuka S , Murakami Y , Nishiyama M , Senoo K |
| Ref : Lett Appl Microbiol , 49 :472 , 2009 |
| Abstract : Yamamoto_2009_Lett.Appl.Microbiol_49_472 |
| ESTHER : Yamamoto_2009_Lett.Appl.Microbiol_49_472 |
| PubMedSearch : Yamamoto_2009_Lett.Appl.Microbiol_49_472 |
| PubMedID: 19674290 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Insertion sequence-based cassette PCR: cultivation-independent isolation of gamma-hexachlorocyclohexane-degrading genes from soil DNA - Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| Author(s) : Fuchu G , Ohtsubo Y , Ito M , Miyazaki R , Ono A , Nagata Y , Tsuda M |
| Ref : Applied Microbiology & Biotechnology , 79 :627 , 2008 |
| Abstract : Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| ESTHER : Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| PubMedSearch : Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| PubMedID: 18425509 |
| Gene_locus related to this paper: psepa-q6vpf3 , sphpi-linb |
| Title : Isolation of hexachlorocyclohexane-degrading Sphingomonas sp. by dehalogenase assay and characterization of genes involved in gamma-HCH degradation - Manickam_2008_J.Appl.Microbiol_104_952 |
| Author(s) : Manickam N , Reddy MK , Saini HS , Shanker R |
| Ref : J Appl Microbiol , 104 :952 , 2008 |
| Abstract : Manickam_2008_J.Appl.Microbiol_104_952 |
| ESTHER : Manickam_2008_J.Appl.Microbiol_104_952 |
| PubMedSearch : Manickam_2008_J.Appl.Microbiol_104_952 |
| PubMedID: 18042212 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Selective loss of lin genes from hexachlorocyclohexane-degrading Pseudomonas aeruginosa ITRC-5 under different growth conditions - Singh_2007_Appl.Microbiol.Biotechnol_76_895 |
| Author(s) : Singh AK , Chaudhary P , Macwan AS , Diwedi UN , Kumar A |
| Ref : Applied Microbiology & Biotechnology , 76 :895 , 2007 |
| Abstract : Singh_2007_Appl.Microbiol.Biotechnol_76_895 |
| ESTHER : Singh_2007_Appl.Microbiol.Biotechnol_76_895 |
| PubMedSearch : Singh_2007_Appl.Microbiol.Biotechnol_76_895 |
| PubMedID: 17602219 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Degradation of beta-hexachlorocyclohexane by haloalkane dehalogenase LinB from gamma-hexachlorocyclohexane-utilizing bacterium Sphingobium sp. MI1205 - Ito_2007_Arch.Microbiol_188_313 |
| Author(s) : Ito M , Prokop Z , Klvana M , Otsubo Y , Tsuda M , Damborsky J , Nagata Y |
| Ref : Arch Microbiol , 188 :313 , 2007 |
| Abstract : Ito_2007_Arch.Microbiol_188_313 |
| ESTHER : Ito_2007_Arch.Microbiol_188_313 |
| PubMedSearch : Ito_2007_Arch.Microbiol_188_313 |
| PubMedID: 17516046 |
| Gene_locus related to this paper: sphpi-linb |
| Title : A gene linB2 responsible for the conversion of beta-HCH and 2,3,4,5,6-pentachlorocyclohexanol in Sphingomonas sp. BHC-A - Wu_2007_Appl.Microbiol.Biotechnol_73_1097 |
| Author(s) : Wu J , Hong Q , Han P , He J , Li S |
| Ref : Applied Microbiology & Biotechnology , 73 :1097 , 2007 |
| Abstract : Wu_2007_Appl.Microbiol.Biotechnol_73_1097 |
| ESTHER : Wu_2007_Appl.Microbiol.Biotechnol_73_1097 |
| PubMedSearch : Wu_2007_Appl.Microbiol.Biotechnol_73_1097 |
| PubMedID: 16977465 |
| Gene_locus related to this paper: sphpi-linb |
| Title : A novel pathway for the biodegradation of gamma-hexachlorocyclohexane by a Xanthomonas sp. strain ICH12 - Manickam_2007_J.Appl.Microbiol_102_1468 |
| Author(s) : Manickam N , Misra R , Mayilraj S |
| Ref : J Appl Microbiol , 102 :1468 , 2007 |
| Abstract : Manickam_2007_J.Appl.Microbiol_102_1468 |
| ESTHER : Manickam_2007_J.Appl.Microbiol_102_1468 |
| PubMedSearch : Manickam_2007_J.Appl.Microbiol_102_1468 |
| PubMedID: 17578411 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Weak activity of haloalkane dehalogenase LinB with 1,2,3-trichloropropane revealed by X-Ray crystallography and microcalorimetry - Monincova_2007_Appl.Environ.Microbiol_73_2005 |
| Author(s) : Monincova M , Prokop Z , Vevodova J , Nagata Y , Damborsky J |
| Ref : Applied Environmental Microbiology , 73 :2005 , 2007 |
| Abstract : Monincova_2007_Appl.Environ.Microbiol_73_2005 |
| ESTHER : Monincova_2007_Appl.Environ.Microbiol_73_2005 |
| PubMedSearch : Monincova_2007_Appl.Environ.Microbiol_73_2005 |
| PubMedID: 17259360 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation - Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| Author(s) : Miyazaki R , Sato Y , Ito M , Ohtsubo Y , Nagata Y , Tsuda M |
| Ref : Applied Environmental Microbiology , 72 :6923 , 2006 |
| Abstract : Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| ESTHER : Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| PubMedSearch : Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| PubMedID: 16963556 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Quantitative analysis of substrate specificity of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 - Kmunicek_2005_Biochemistry_44_3390 |
| Author(s) : Kmunicek J , Hynkova K , Jedlicka T , Nagata Y , Negri A , Gago F , Wade RC , Damborsky J |
| Ref : Biochemistry , 44 :3390 , 2005 |
| Abstract : Kmunicek_2005_Biochemistry_44_3390 |
| ESTHER : Kmunicek_2005_Biochemistry_44_3390 |
| PubMedSearch : Kmunicek_2005_Biochemistry_44_3390 |
| PubMedID: 15736949 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Organization of lin genes and IS6100 among different strains of hexachlorocyclohexane-degrading Sphingomonas paucimobilis: evidence for horizontal gene transfer - Dogra_2004_J.Bacteriol_186_2225 |
| Author(s) : Dogra C , Raina V , Pal R , Suar M , Lal S , Gartemann KH , Holliger C , van der Meer JR , Lal R |
| Ref : Journal of Bacteriology , 186 :2225 , 2004 |
| Abstract : Dogra_2004_J.Bacteriol_186_2225 |
| ESTHER : Dogra_2004_J.Bacteriol_186_2225 |
| PubMedSearch : Dogra_2004_J.Bacteriol_186_2225 |
| PubMedID: 15060023 |
| Gene_locus related to this paper: psepa-q6vpf3 , psepa-q6vpf4 , psepa-q6vqy9 , sphpi-linb |
| Title : Crystal structure of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 A resolution: dynamics of catalytic residues - Oakley_2004_Biochemistry_43_870 |
| Author(s) : Oakley AJ , Klvana M , Otyepka M , Nagata Y , Wilce MC , Damborsky J |
| Ref : Biochemistry , 43 :870 , 2004 |
| Abstract : Oakley_2004_Biochemistry_43_870 |
| ESTHER : Oakley_2004_Biochemistry_43_870 |
| PubMedSearch : Oakley_2004_Biochemistry_43_870 |
| PubMedID: 14744129 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Catalytic mechanism of the maloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 - Prokop_2003_J.Biol.Chem_278_45094 |
| Author(s) : Prokop Z , Monincova M , Chaloupkova R , Klvana M , Nagata Y , Janssen DB , Damborsky J |
| Ref : Journal of Biological Chemistry , 278 :45094 , 2003 |
| Abstract : Prokop_2003_J.Biol.Chem_278_45094 |
| ESTHER : Prokop_2003_J.Biol.Chem_278_45094 |
| PubMedSearch : Prokop_2003_J.Biol.Chem_278_45094 |
| PubMedID: 12952988 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26: X-ray crystallographic studies of dehalogenation of brominated substrates - Streltsov_2003_Biochemistry_42_10104 |
| Author(s) : Streltsov VA , Prokop Z , Damborsky J , Nagata Y , Oakley A , Wilce MC |
| Ref : Biochemistry , 42 :10104 , 2003 |
| Abstract : Streltsov_2003_Biochemistry_42_10104 |
| ESTHER : Streltsov_2003_Biochemistry_42_10104 |
| PubMedSearch : Streltsov_2003_Biochemistry_42_10104 |
| PubMedID: 12939138 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Cloning and characterization of lin genes responsible for the degradation of Hexachlorocyclohexane isomers by Sphingomonas paucimobilis strain B90 - Kumari_2002_Appl.Environ.Microbiol_68_6021 |
| Author(s) : Kumari R , Subudhi S , Suar M , Dhingra G , Raina V , Dogra C , Lal S , van der Meer JR , Holliger C , Lal R |
| Ref : Applied Environmental Microbiology , 68 :6021 , 2002 |
| Abstract : Kumari_2002_Appl.Environ.Microbiol_68_6021 |
| ESTHER : Kumari_2002_Appl.Environ.Microbiol_68_6021 |
| PubMedSearch : Kumari_2002_Appl.Environ.Microbiol_68_6021 |
| PubMedID: 12450824 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Halide-stabilizing residues of haloalkane dehalogenases studied by quantum mechanic calculations and site-directed mutagenesis - Bohac_2002_Biochemistry_41_14272 |
| Author(s) : Bohac M , Nagata Y , Prokop Z , Prokop M , Monincova M , Tsuda M , Koca J , Damborsky J |
| Ref : Biochemistry , 41 :14272 , 2002 |
| Abstract : Bohac_2002_Biochemistry_41_14272 |
| ESTHER : Bohac_2002_Biochemistry_41_14272 |
| PubMedSearch : Bohac_2002_Biochemistry_41_14272 |
| PubMedID: 12450392 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Exploring the structure and activity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26: evidence for product- and water-mediated inhibition - Oakley_2002_Biochemistry_41_4847 |
| Author(s) : Oakley AJ , Prokop Z , Bohac M , Kmunicek J , Jedlicka T , Monincova M , Kuta-Smatanova I , Nagata Y , Damborsky J , Wilce MC |
| Ref : Biochemistry , 41 :4847 , 2002 |
| Abstract : Oakley_2002_Biochemistry_41_4847 |
| ESTHER : Oakley_2002_Biochemistry_41_4847 |
| PubMedSearch : Oakley_2002_Biochemistry_41_4847 |
| PubMedID: 11939779 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Crystal structure of the haloalkane dehalogenase from Sphingomonas paucimobilis UT26 - Marek_2000_Biochemistry_39_14082 |
| Author(s) : Marek J , Vevodova J , Smatanova IK , Nagata Y , Svensson LA , Newman J , Takagi M , Damborsky J |
| Ref : Biochemistry , 39 :14082 , 2000 |
| Abstract : Marek_2000_Biochemistry_39_14082 |
| ESTHER : Marek_2000_Biochemistry_39_14082 |
| PubMedSearch : Marek_2000_Biochemistry_39_14082 |
| PubMedID: 11087355 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Two different types of dehalogenases, LinA and LinB, involved in gamma-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26 are localized in the periplasmic space without molecular processing - Nagata_1999_J.Bacteriol_181_5409 |
| Author(s) : Nagata Y , Futamura A , Miyauchi K , Takagi M |
| Ref : Journal of Bacteriology , 181 :5409 , 1999 |
| Abstract : Nagata_1999_J.Bacteriol_181_5409 |
| ESTHER : Nagata_1999_J.Bacteriol_181_5409 |
| PubMedSearch : Nagata_1999_J.Bacteriol_181_5409 |
| PubMedID: 10464214 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Identification of the catalytic triad in the haloalkane dehalogenase from Sphingomonas paucimobilis UT26 - Hynkova_1999_FEBS.Lett_446_177 |
| Author(s) : Hynkova K , Nagata Y , Takagi M , Damborsky J |
| Ref : FEBS Letters , 446 :177 , 1999 |
| Abstract : Hynkova_1999_FEBS.Lett_446_177 |
| ESTHER : Hynkova_1999_FEBS.Lett_446_177 |
| PubMedSearch : Hynkova_1999_FEBS.Lett_446_177 |
| PubMedID: 10100638 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Crystallization and preliminary X-ray diffraction analysis of haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26 - Smatanova_1999_Acta.Crystallogr.D.Biol.Crystallogr_55_1231 |
| Author(s) : Smatanova I , Nagata Y , Svensson LA , Takagi M , Marek J |
| Ref : Acta Crystallographica D Biol Crystallogr , 55 :1231 , 1999 |
| Abstract : Smatanova_1999_Acta.Crystallogr.D.Biol.Crystallogr_55_1231 |
| ESTHER : Smatanova_1999_Acta.Crystallogr.D.Biol.Crystallogr_55_1231 |
| PubMedSearch : Smatanova_1999_Acta.Crystallogr.D.Biol.Crystallogr_55_1231 |
| PubMedID: 10329794 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26 - Nagata_1997_Appl.Environ.Microbiol_63_3707 |
| Author(s) : Nagata Y , Miyauchi K , Damborsky J , Manova K , Ansorgova A , Takagi M |
| Ref : Applied Environmental Microbiology , 63 :3707 , 1997 |
| Abstract : Nagata_1997_Appl.Environ.Microbiol_63_3707 |
| ESTHER : Nagata_1997_Appl.Environ.Microbiol_63_3707 |
| PubMedSearch : Nagata_1997_Appl.Environ.Microbiol_63_3707 |
| PubMedID: 9293022 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Cloning and sequencing of a dehalogenase gene encoding an enzyme with hydrolase activity involved in the degradation of gamma-hexachlorocyclohexane in Pseudomonas paucimobilis - Nagata_1993_J.Bacteriol_175_6403 |
| Author(s) : Nagata Y , Nariya T , Ohtomo R , Fukuda M , Yano K , Takagi M |
| Ref : Journal of Bacteriology , 175 :6403 , 1993 |
| Abstract : Nagata_1993_J.Bacteriol_175_6403 |
| ESTHER : Nagata_1993_J.Bacteriol_175_6403 |
| PubMedSearch : Nagata_1993_J.Bacteriol_175_6403 |
| PubMedID: 7691794 |
| Gene_locus related to this paper: sphpi-linb |