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Gene_locus Report for: ramva-a0a1d1uki4

Ramazzottius varieornatus (Water bear) (Tardigrade). Carboxylic ester hydrolase

Relationship
Family|ACHE
Block| C
Position in NCBI Life Tree|Ramazzottius varieornatus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Tardigrada: N E > Eutardigrada: N E > Parachela: N E > Hypsibiidae: N E > Ramazzottius: N E > Ramazzottius varieornatus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BDGG01000001
1 UniProt : A0A1D1UKI4
1 UniProt : A0A1D1UKI4
1 Interpro : A0A1D1UKI4
1 Pfam : A0A1D1UKI4
1 PIRSF : A0A1D1UKI4
1 SUPERFAM : A0A1D1UKI4
Sequence
Graphical view for this peptide sequence: ramva-a0a1d1uki4
Colored MSA for ACHE (raw)
MLKPNRWRDPSPQCNYAESHCARCRCASTSTPPPLPPSRAPSVTTSSKPS
VRCRNPLDFSIRLLCQYLVLLLLPWASLAKDQLIVKTSKGLVRGFSMMSP
SGKQVDAFFGIPFAQPPLEDLRFRPPIPVEPWDGILNATKAANSCYQPLD
TAFGDFIGATMWNANTEISEDCLYMNIWIPRPRPTNAAVMVWVYGGGFYS
GTITLDVYDGSTLAAQENIIVASIQYRVGSLGFLYFGTDDIPGNAAMFDQ
VAAFRFIKENIRNFGGNPDNITIFGESAGAVSVALHLLSPLSRNLFNQAI
MSSGSATCPWGTTTPEVALKRTLELTKRVGCRLDPVTENLPAIAKCLRKV
PAAEFVDKEWVTSGLIEFPFVPVIDGEFLPQRPDTILKNGAFKRCNIMMG
SMSEEGSFFVNYHFDNLFTIQQNVHLSHEELIHSLEKAFYNFSRVAKDAI
IFQYTDWVHPNDPLKNVDLLEKAVGDYFFTCNVNEMAWSYAGAGQNIHMY
HFNHRSSNMPWPEWIGAAHGYEVEYLFGWPLDPKRGYKQEEVELSKRMMN
YWANFAKTGNPSLTKEGGYSKHSWPVYTLHGKEHLMLNVKDPAIGRGPRA
TQCAFWKKYMPQLMSMTADIDEVEAQWKAQFHEWNTRYIVDWKAQFDRYV
RQTRKLQAHSLFAHEDL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLKPNRWRDPSPQCNYAESHCARCRCASTSTPPPLPPSRAPSVTTSSKPS
VRCRNPLDFSIRLLCQYLVLLLLPWASLAKDQLIVKTSKGLVRGFSMMSP
SGKQVDAFFGIPFAQPPLEDLRFRPPIPVEPWDGILNATKAANSCYQPLD
TAFGDFIGATMWNANTEISEDCLYMNIWIPRPRPTNAAVMVWVYGGGFYS
GTITLDVYDGSTLAAQENIIVASIQYRVGSLGFLYFGTDDIPGNAAMFDQ
VAAFRFIKENIRNFGGNPDNITIFGESAGAVSVALHLLSPLSRNLFNQAI
MSSGSATCPWGTTTPEVALKRTLELTKRVGCRLDPVTENLPAIAKCLRKV
PAAEFVDKEWVTSGLIEFPFVPVIDGEFLPQRPDTILKNGAFKRCNIMMG
SMSEEGSFFVNYHFDNLFTIQQNVHLSHEELIHSLEKAFYNFSRVAKDAI
IFQYTDWVHPNDPLKNVDLLEKAVGDYFFTCNVNEMAWSYAGAGQNIHMY
HFNHRSSNMPWPEWIGAAHGYEVEYLFGWPLDPKRGYKQEEVELSKRMMN
YWANFAKTGNPSLTKEGGYSKHSWPVYTLHGKEHLMLNVKDPAIGRGPRA
TQCAFWKKYMPQLMSMTADIDEVEAQWKAQFHEWNTRYIVDWKAQFDRYV
RQTRKLQAHSLFAHEDL


Reference
    Title: Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein
    Hashimoto T, Horikawa DD, Saito Y, Kuwahara H, Kozuka-Hata H, Shin IT, Minakuchi Y, Ohishi K, Motoyama A and Kunieda T <18 more author(s)>
    Ref: Nat Commun, 7:12808, 2016 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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