Gene_Locus Report

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Gene_locus Report for: pseux-f4cva7

Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JC 13855 / CB1190) Putative uncharacterized protein

Relationship
Family|Bacterial_Est97
Block| X
Position in NCBI Life Tree|Pseudonocardia dioxanivorans
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Pseudonocardiales: N E > Pseudonocardiaceae: N E > Pseudonocardia: N E > Pseudonocardia dioxanivorans: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP002593
1 UniProt : F4CVA7
1 UniProt : F4CVA7
1 Interpro : F4CVA7
1 Pfam : F4CVA7
1 PIRSF : F4CVA7
1 SUPERFAM : F4CVA7
Sequence
Graphical view for this peptide sequence: pseux-f4cva7
Colored MSA for Bacterial_Est97 (raw)
MKPIEFTTRTSSDGVLERDFVVDDVPGVLWSAETGPTGPLVLLGHGGGTH
KRAAGMSGRAHKLVLDGGLSAVTLDAPAHGDRPRSAYDEEQVEIMQRLMA
AGDPVGPVVEEYNADIARRAVPEWRATLDALQRLPEIGAGPVGYFGLNMG
TAIGIPLVAAEPRIAAAVFGVFWHDSVAPAAKEITVPLEFVMQWDDEHIP
REQGLALFDAFGSTQKTLHANAGRHKEVPRFESDSATRFFVRHLLS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKPIEFTTRTSSDGVLERDFVVDDVPGVLWSAETGPTGPLVLLGHGGGTH
KRAAGMSGRAHKLVLDGGLSAVTLDAPAHGDRPRSAYDEEQVEIMQRLMA
AGDPVGPVVEEYNADIARRAVPEWRATLDALQRLPEIGAGPVGYFGLNMG
TAIGIPLVAAEPRIAAAVFGVFWHDSVAPAAKEITVPLEFVMQWDDEHIP
REQGLALFDAFGSTQKTLHANAGRHKEVPRFESDSATRFFVRHLLS


Reference
    Title: Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190
    Sales CM, Mahendra S, Grostern A, Parales RE, Goodwin LA, Woyke T, Nolan M, Lapidus A, Chertkov O and Alvarez-Cohen L <2 more author(s)>
    Ref: Journal of Bacteriology, 193:4549, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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