Gene_locus Report for: pripa-h3fj25

Pristionchus pacificus Two genes concatened incomplete

Relationship

Family	\|	Carb_B_Nematoda
Block	\|	C
Position in NCBI Life Tree	\|	Pristionchus pacificus

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Diplogasterida: N E > Neodiplogasteridae: N E > Pristionchus: N E > Pristionchus pacificus: N E

There are 63 a/b hydrolases in Pristionchus pacificus view in a: Table

ABHD12-PHARC : pripa-h3esz7Pristionchus pacificus (Parasitic nematode). Uncharacterized protein.
ACHE : pripa-a0a2a6c715Pristionchus pacificus (Parasitic nematode) Ace-1, pripa-a0a2a6d1j1Pristionchus pacificus (Parasitic nematode) Ace-2, pripa-h3ext9Pristionchus pacificus Uncharacterized protein.
Arylacetamide_deacetylase : pripa-a0a0f5chi5Pristionchus pacificus (Parasitic nematode). Hydrolase, pripa-h3fh18Pristionchus pacificus (Parasitic nematode). Uncharacterized protein.
Carboxypeptidase_S10 : pripa-h3dsz3.1Pristionchus pacificus (Parasitic nematode) Uncharacterized protein, pripa-h3dsz3.2Pristionchus pacificus (Parasitic nematode) Uncharacterized protein, pripa-h3dsz3.3Pristionchus pacificus (Parasitic nematode) Uncharacterized protein.
Carb_B_Nematoda : pripa-h3dz72Pristionchus pacificus 2 genes concatened, pripa-h3dzd7Pristionchus pacificus Uncharacterized protein, pripa-h3e3k0Pristionchus pacificus Uncharacterized protein, pripa-h3e3r7Pristionchus pacificus Uncharacterized protein, pripa-h3e7s6Pristionchus pacificus Uncharacterized protein, pripa-h3e7s7Pristionchus pacificus Uncharacterized protein, pripa-h3e256Pristionchus pacificus Uncharacterized protein, pripa-h3e443Pristionchus pacificus Uncharacterized protein, pripa-h3eb90Pristionchus pacificus Uncharacterized protein, pripa-h3eb91Pristionchus pacificus Uncharacterized protein, pripa-h3elb3Pristionchus pacificus Uncharacterized protein, pripa-h3epg7Pristionchus pacificus Uncharacterized protein, pripa-h3ept4Pristionchus pacificus Uncharacterized protein, pripa-h3ept8Pristionchus pacificus Uncharacterized protein, pripa-h3ew78Pristionchus pacificus Uncharacterized protein, pripa-h3f0j4Pristionchus pacificus (Parasitic nematode). Uncharacterized protein, pripa-h3f919Pristionchus pacificus (Parasitic nematode) Uncharacterized protein, pripa-h3f920Pristionchus pacificus (Parasitic nematode) Uncharacterized protein, pripa-h3fg12Pristionchus pacificus Uncharacterized protein, pripa-h3fg45Pristionchus pacificus Uncharacterized protein, pripa-h3fg46Pristionchus pacificus Uncharacterized protein, pripa-h3fg47Pristionchus pacificus Uncharacterized protein, pripa-h3fg48Pristionchus pacificus Uncharacterized protein, pripa-h3fg51.1Pristionchus pacificus 2 genes separated screwed, pripa-h3fg51.2Pristionchus pacificus 2 genes separated screwed, pripa-h3fhh1Pristionchus pacificus Uncharacterized protein, pripa-h3fhv6Pristionchus pacificus Uncharacterized protein, pripa-h3fig0Pristionchus pacificus Uncharacterized protein, pripa-h3fiu1Pristionchus pacificus Uncharacterized protein, pripa-h3fn83Pristionchus pacificus Uncharacterized protein, pripa-h3fn84Pristionchus pacificus Uncharacterized protein, pripa-h3fn85Pristionchus pacificus Uncharacterized protein, pripa-h3ftp8Pristionchus pacificus Uncharacterized protein, pripa-h3ftq0Pristionchus pacificus Uncharacterized protein, pripa-h3fvb3Pristionchus pacificus Uncharacterized protein, pripa-h3fvb4Pristionchus pacificus Uncharacterized protein, pripa-h3fxl1Pristionchus pacificus Uncharacterized protein, pripa-h3g1q9Pristionchus pacificus Uncharacterized protein, pripa-h3g1r2Pristionchus pacificus Uncharacterized protein, pripa-h3g217Pristionchus pacificus Uncharacterized protein, pripa-a0a0f5cf17Pristionchus pacificus (Parasitic nematode). Carboxylic ester hydrolase, pripa-a0a0f5crg5Pristionchus pacificus (Parasitic nematode). Carboxylic ester hydrolase, pripa-a0a0f5csq7Pristionchus pacificus (Parasitic nematode). Carboxylic ester hydrolase.
Duf_1057 : pripa-h3fyl5Pristionchus pacificus (Parasitic nematode). Uncharacterized protein, pripa-h3em42Pristionchus pacificus (Parasitic nematode). Uncharacterized protein, pripa-h3dya7Pristionchus pacificus (Parasitic nematode). Uncharacterized protein.
FSH1 : pripa-h3dzn5Pristionchus pacificus (Parasitic nematode). Uncharacterized protein.
Gliotactin : pripa-h3fnc0Pristionchus pacificus Two genes concanated one piece missing.
Ndr_family : pripa-h3en84Pristionchus pacificus (Parasitic nematode) Uncharacterized protein.
Neuroligin : pripa-h3fn94Pristionchus pacificus Uncharacterized protein.
NLS3-Tex30 : pripa-h3g345Pristionchus pacificus Uncharacterized protein.
OtherNon-catalytic_C : pripa-h3fcj7Pristionchus pacificus Uncharacterized protein.
Valacyclovir-hydrolase : pripa-h3f8r5Pristionchus pacificus Uncharacterized protein

Molecular evidence		Database
No mutation No structure No kinetic No Substrate No inhibitor		1 Genbank : ABKE02005648

Sequence

Peptide

Graphical view for this peptide sequence: pripa-h3fj25
Colored MSA for Carb_B_Nematoda (raw)
MLLVLVLLLSSAISNAKLITVKTSRGSVQGFDHDFGDDKTQTFYGYGQLF LGIPYAKAPLGKKRFTLTEDICQYSDTGEVHNATYYRPRCWQFRDSLQPA DNMDEDCLYLNVYSPDVTGSYPVMFYIPGGSFTTGGGDVYDWRGVTYYFQ MMALRWVNEEISHFGGDTTRITIFGQSAGASAVSHLGMSPMARGLFHQQI QNSGSIMLEILTPEPERGSIDKERAKQICNMTDTSNWQAPESDAILMDCL VNASPQEIIKYDMTTGKYWAPSIDGAILPDYPENLAKIRPHYPLIAIDMM EEAASTPPGSTDRLPMTGPNTALLMWEGFWYFRDHKAVNELNEYAINVFS NGTSPDKDDHLGWDKLDVDMNTGMLFNAMFLRDIKWQTQYGNEKVWLFTL AHRSELPFPIAIEDWIPVRHCADLPYIWFYADIWSTYNASAGDFATADHF GRIWTDFAKNGKIDYPTAGVERNYIEIDEELTMKSNWRETTDDVFNRKGV ELFGEAPNLAISPDGWAMLNELGPKIKAKWEEAKAAGCPAPEVPTTTATS TTAKAVSTTTKTTKMTKMTPTSTTSEATTTTKVAITIKFFELVALICIIL LKM
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MLLVLVLLLSSAISNAKLITVKTSRGSVQGFDHDFGDDKTQTFYGYGQLF
LGIPYAKAPLGKKRFTLTEDICQYSDTGEVHNATYYRPRCWQFRDSLQPA
DNMDEDCLYLNVYSPDVTGSYPVMFYIPGGSFTTGGGDVYDWRGVTYYFQ
MMALRWVNEEISHFGGDTTRITIFGQSAGASAVSHLGMSPMARGLFHQQI
QNSGSIMLEILTPEPERGSIDKERAKQICNMTDTSNWQAPESDAILMDCL
VNASPQEIIKYDMTTGKYWAPSIDGAILPDYPENLAKIRPHYPLIAIDMM
EEAASTPPGSTDRLPMTGPNTALLMWEGFWYFRDHKAVNELNEYAINVFS
NGTSPDKDDHLGWDKLDVDMNTGMLFNAMFLRDIKWQTQYGNEKVWLFTL
AHRSELPFPIAIEDWIPVRHCADLPYIWFYADIWSTYNASAGDFATADHF
GRIWTDFAKNGKIDYPTAGVERNYIEIDEELTMKSNWRETTDDVFNRKGV
ELFGEAPNLAISPDGWAMLNELGPKIKAKWEEAKAAGCPAPEVPTTTATS
TTAKAVSTTTKTTKMTKMTPTSTTSEATTTTKVAITIKFFELVALICIIL
LKM

Reference

Title:

Dieterich C, Clifton SW, Schuster LN, Chinwalla A, Delehaunty K, Dinkelacker I, Fulton L, Fulton R, Godfrey J and Sommer RJ <7 more author(s)>

Ref:

PubMed

Other Papers

Send your questions or comments to :Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.

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