Gene_Locus Report

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Gene_locus Report for: pomca-a0a2t7pi47

Pomacea canaliculata (Golden apple snail). Uncharacterized protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Pomacea canaliculata
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Lophotrochozoa: N E > Mollusca: N E > Gastropoda: N E > Caenogastropoda: N E > Architaenioglossa: N E > Ampullarioidea: N E > Ampullariidae: N E > Pomacea: N E > Pomacea canaliculata: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: pomca-a0a2t7pi47
Colored MSA for abh_upf0017 (raw)
MVVGEDGASGLRAAVALCVMYWLLLSYPLTLALTCLGTLLITVLIYLKRL
LRALECPARLTCRDSALARHVGAHCPTFRRILRLPAWARNCHVQSCLGLL
ACRQGAHFAREYLQLHDGGLLALDWAVGSQYVSPAHPLLLLLPDLTGSAV
QLSALCCQALTLGMRAVVINRRGQAGSIVSTPKLPGYGDTSDLREVIGYL
QRTHQRAALCAVGVGTGGDALLSYLGQFGSSARLSAAVCISPSYNAADTL
HGLPTPYLQLYLSHLKQAVLSNAQVFGPLVQRARGAWSVKEFDQKVVSTC
AGYNDLEDFWEDNEPLREADEVSAPVLCVSSLDDPVCRPQHIPYDLFRAL
PNFFLLTLPHGGHAGFRQGLGGLSWAEAAAMDFVQAMLSFQPCTCYVANG
VHVATQTNDLLDWTPDPLTLDLVTLEPEDTSRLPRTLPAEWHG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MVVGEDGASGLRAAVALCVMYWLLLSYPLTLALTCLGTLLITVLIYLKRL
LRALECPARLTCRDSALARHVGAHCPTFRRILRLPAWARNCHVQSCLGLL
ACRQGAHFAREYLQLHDGGLLALDWAVGSQYVSPAHPLLLLLPDLTGSAV
QLSALCCQALTLGMRAVVINRRGQAGSIVSTPKLPGYGDTSDLREVIGYL
QRTHQRAALCAVGVGTGGDALLSYLGQFGSSARLSAAVCISPSYNAADTL
HGLPTPYLQLYLSHLKQAVLSNAQVFGPLVQRARGAWSVKEFDQKVVSTC
AGYNDLEDFWEDNEPLREADEVSAPVLCVSSLDDPVCRPQHIPYDLFRAL
PNFFLLTLPHGGHAGFRQGLGGLSWAEAAAMDFVQAMLSFQPCTCYVANG
VHVATQTNDLLDWTPDPLTLDLVTLEPEDTSRLPRTLPAEWHG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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