Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: polpa-d3ban4

Polysphondylium pallidum (Cellular slime mold) Neugrin domain-containing protein

Comment
only n-term Pfam A COesterase 4 577


Relationship
Family|Cholinesterase-like
Block| C
Position in NCBI Life Tree|Polysphondylium pallidum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Amoebozoa: N E > Mycetozoa: N E > Dictyosteliida: N E > Polysphondylium: N E > Polysphondylium pallidum: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ADBJ01000025
1 UniProt : D3BAN4
1 UniProt : D3BAN4
1 Interpro : D3BAN4
1 Pfam : D3BAN4
1 PIRSF : D3BAN4
1 SUPERFAM : D3BAN4
Sequence
Graphical view for this peptide sequence: polpa-d3ban4
Colored MSA for Cholinesterase-like (raw)
MRCLIPYAQPPVGHLRWSNPTEPVGWDGIRDCSYERESCPQKCQPLSLTC
PVVGISEDCLYLTIYTPLGPPPSSKTSSSSSDSDSDSSDVRPLTNNNKNN
NNLNGNEKESELRPVLVFIPGSEFTSGSSESPLYDGKQFAENGIILVTVN
YRLGILGFLGNKEAGINGNFGFHDQLAALRWVQKNIGAFGGDIKRITLAG
QSAGALSVLTHLISPLSNGLFQSVIIQSSPTTIGYHTNATAKEFFHRLLE
RTNCTAPKTSNFNSDDGSDDYYPDYPDYPDYQDISYERNFTLNCLKELSV
NQIIAIQMDIDLEVNALSGNNPLAVVAQWTPMIDESSIPDQPIPMLETGC
FNKVNIMLGGDESTIMMKEYRPAEVDTPMNRKSFTRFLGKVFKDSVQRNK
IIDLYNRTATSPTAKVSLITLRDLNENDDHRPLLSNILNDLVFICSSRYI
VRCISQSKSNNNYNYYNYINVNNNVYYYRYKHANNLLCINTTTCHGDKMV
PYIFNSFKTIGLNISDDDRQMGEHISKYWTNFVTNQNPNLGYQVPIHWSK
YTENSYQNNVLIFDTNPFADNI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRCLIPYAQPPVGHLRWSNPTEPVGWDGIRDCSYERESCPQKCQPLSLTC
PVVGISEDCLYLTIYTPLGPPPSSKTSSSSSDSDSDSSDVRPLTNNNKNN
NNLNGNEKESELRPVLVFIPGSEFTSGSSESPLYDGKQFAENGIILVTVN
YRLGILGFLGNKEAGINGNFGFHDQLAALRWVQKNIGAFGGDIKRITLAG
QSAGALSVLTHLISPLSNGLFQSVIIQSSPTTIGYHTNATAKEFFHRLLE
RTNCTAPKTSNFNSDDGSDDYYPDYPDYPDYQDISYERNFTLNCLKELSV
NQIIAIQMDIDLEVNALSGNNPLAVVAQWTPMIDESSIPDQPIPMLETGC
FNKVNIMLGGDESTIMMKEYRPAEVDTPMNRKSFTRFLGKVFKDSVQRNK
IIDLYNRTATSPTAKVSLITLRDLNENDDHRPLLSNILNDLVFICSSRYI
VRCISQSKSNNNYNYYNYINVNNNVYYYRYKHANNLLCINTTTCHGDKMV
PYIFNSFKTIGLNISDDDRQMGEHISKYWTNFVTNQNPNLGYQVPIHWSK
YTENSYQNNVLIFDTNPFADNI



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer