Gene_Locus Report

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Gene_locus Report for: plabd-f0sh60

Planctomyces brasiliensis Acetyl xylan esterase

Comment
c-term excluded.


Relationship
Family|Pectin_methylesterase
Block| X
Position in NCBI Life Tree|Planctomyces brasiliensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > PVC group: N E > Planctomycetes: N E > Planctomycetia: N E > Planctomycetales: N E > Planctomycetaceae: N E > Rubinisphaera: N E > Rubinisphaera brasiliensis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP002546
1 UniProt : F0SH60
1 UniProt : F0SH60
1 Interpro : F0SH60
1 Pfam : F0SH60
1 PIRSF : F0SH60
1 SUPERFAM : F0SH60
Sequence
Graphical view for this peptide sequence: plabd-f0sh60
Colored MSA for Pectin_methylesterase (raw)
MKHFIAFAVLLFVAATAFSEDVRHQPLKDLNGYFPFNPPSTLNEWEERRE
YVRRQILVATGLWPMPSKTPLNPVIHGKIERDGYTVEKVFFESAPGFFVT
GNLYRPTNVQGKVPGVMFAHGHREDARLYLTPEQTLRTQIAVGAERFESG
GQSIYQSQCRQLARMGCVVWQWDMLGDSDSIQLSRELVHGFAKQRPEMNT
TKRWGLFSPQAEAHCQNVMGLQTLNAVRGLDFLLSLPEVDPDRVAATGAS
GGGTQTMILAAIDDRIKLSFPVVMVSTSMQGGCTCENASLLRVNTGNVEF
AALFAPRPQGMNTADDWTREMATKGFPDLQKLYKAYGKPDNVFLKRGEHF
PHNYNAVTRSAFYTFLNKH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKHFIAFAVLLFVAATAFSEDVRHQPLKDLNGYFPFNPPSTLNEWEERRE
YVRRQILVATGLWPMPSKTPLNPVIHGKIERDGYTVEKVFFESAPGFFVT
GNLYRPTNVQGKVPGVMFAHGHREDARLYLTPEQTLRTQIAVGAERFESG
GQSIYQSQCRQLARMGCVVWQWDMLGDSDSIQLSRELVHGFAKQRPEMNT
TKRWGLFSPQAEAHCQNVMGLQTLNAVRGLDFLLSLPEVDPDRVAATGAS
GGGTQTMILAAIDDRIKLSFPVVMVSTSMQGGCTCENASLLRVNTGNVEF
AALFAPRPQGMNTADDWTREMATKGFPDLQKLYKAYGKPDNVFLKRGEHF
PHNYNAVTRSAFYTFLNKH



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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