Gene_Locus Report

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Gene_locus Report for: medtr-MtD14

Medicago truncatula (Barrel medic) (Medicago tribuloides) D14 Sigma factor sigb regulation rsbq-like protein Medtr1g018320

Relationship
Family|RsbQ-like
Block| X
Position in NCBI Life Tree|Medicago truncatula
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > fabids: N E > Fabales: N E > Fabaceae: N E > Papilionoideae: N E > Trifolieae: N E > Medicago: N E > Medicago truncatula: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AES59337, XP_003589086, RHN77232
1 UniProt : G7ICD6
1 UniProt : G7ICD6
1 Interpro : G7ICD6
1 Pfam : G7ICD6
1 PIRSF : G7ICD6
1 SUPERFAM : G7ICD6
Sequence
Graphical view for this peptide sequence: medtr-MtD14
Colored MSA for RsbQ-like (raw)
MGSTSILDALNVRVEGSGDKYIVFAHGFGTDQSAWQRVLPYFTRSYKVIL
YDLVCAGSVNPDYFDYRRYTTLDAYVDDLLNILDSLHVTRCAYVGHSISA
MIGMLASIRRPELFSKLILIGASPRFLNDGENYHGGFEQGEIEQVFSAME
ANYEAWVNGFAPLAVGADVPTAVREFSRTLFNMRPDISLFVSRTVFNSDL
RGILGLVKVPCCIMQTARDMSVPATVATYMKEHLGGKSTVQWLDTEGHLP
HLSAPSYLAHQLEIALSH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGSTSILDALNVRVEGSGDKYIVFAHGFGTDQSAWQRVLPYFTRSYKVIL
YDLVCAGSVNPDYFDYRRYTTLDAYVDDLLNILDSLHVTRCAYVGHSISA
MIGMLASIRRPELFSKLILIGASPRFLNDGENYHGGFEQGEIEQVFSAME
ANYEAWVNGFAPLAVGADVPTAVREFSRTLFNMRPDISLFVSRTVFNSDL
RGILGLVKVPCCIMQTARDMSVPATVATYMKEHLGGKSTVQWLDTEGHLP
HLSAPSYLAHQLEIALSH



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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