Gene_Locus Report

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Gene_locus Report for: lotgi-v4aaa2

Lottia gigantea (Giant owl limpet) Uncharacterized protein

Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Lottia gigantea
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Lophotrochozoa: N E > Mollusca: N E > Gastropoda: N E > Patellogastropoda: N E > Lottioidea: N E > Lottiidae: N E > Lottia: N E > Lottia gigantea: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : KB200639
1 UniProt : V4AAA2
1 UniProt : V4AAA2
1 Interpro : V4AAA2
1 Pfam : V4AAA2
1 PIRSF : V4AAA2
1 SUPERFAM : V4AAA2
Sequence
Graphical view for this peptide sequence: lotgi-v4aaa2
Colored MSA for Neuroligin (raw)
SRSCYVVFIYLALLWSDITSEVIRQRLSDRIIRTKQGRIRGVEVRFITPD
DLELKNVTAYLGLRYGDVQGGQLRFNPCSNPSERWPFVKSMVDYHAVCPQ
RIPEVTSDTTLSSRFMKSIIPFLHKQIEDCLTLNIYVPHQGSKGLTAPFP
VMVFVHGESYDTGTGNAYDGSVLASYGKVIVVTLNYRVGVLGFLSTGDGA
AMGNYAQLDIIQALHWLKENIVSFNGDPSRVTLFGHGHGAAIVNLILLSP
FVQGHGPLFQRAIIQSGSALSTWAVSYDPVWCTHKLAINVNCSRHISNSG
ALLKCLRERSWKELVNAVPLPPKYYSCFAPSIDGWTVLPKKVEELMKKKQ
SKFAEAKVMFGITKNEAYSYLKQHEIKKGISEFRKSQMIRTYVQNVFKYH
RQKIYEILDHHYTDWNRMSDKLSKRNNILELLSDGQYVAPLIKAAQYHAE
TADTYLYAFSYSTQTEGSLNEDVHGIHGDELPYVFGAPLVGGISPFPETY
TNAERMISEAVMTYWTNFAKTGDPNSPRNQTSLHGGRVKNRFVNINWPKF
NLHDQQYLLIARRPTVRHHYRGQKLALWLDLIPKINQGDGSNPSQHLLKN
SDNRSSFDDYPRLVPSLDNVFPSPPAMPPIAPIPSSVPNTGVWSTPSIFL
EETSENPDQLDSTHIEETGGNYGPLLDRADSELSTVLVGPVNNANNESKE
TSVPLSVVVAIGCSLLFLNILIFAGVCYQRER
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

SRSCYVVFIYLALLWSDITSEVIRQRLSDRIIRTKQGRIRGVEVRFITPD
DLELKNVTAYLGLRYGDVQGGQLRFNPCSNPSERWPFVKSMVDYHAVCPQ
RIPEVTSDTTLSSRFMKSIIPFLHKQIEDCLTLNIYVPHQGSKGLTAPFP
VMVFVHGESYDTGTGNAYDGSVLASYGKVIVVTLNYRVGVLGFLSTGDGA
AMGNYAQLDIIQALHWLKENIVSFNGDPSRVTLFGHGHGAAIVNLILLSP
FVQGHGPLFQRAIIQSGSALSTWAVSYDPVWCTHKLAINVNCSRHISNSG
ALLKCLRERSWKELVNAVPLPPKYYSCFAPSIDGWTVLPKKVEELMKKKQ
SKFAEAKVMFGITKNEAYSYLKQHEIKKGISEFRKSQMIRTYVQNVFKYH
RQKIYEILDHHYTDWNRMSDKLSKRNNILELLSDGQYVAPLIKAAQYHAE
TADTYLYAFSYSTQTEGSLNEDVHGIHGDELPYVFGAPLVGGISPFPETY
TNAERMISEAVMTYWTNFAKTGDPNSPRNQTSLHGGRVKNRFVNINWPKF
NLHDQQYLLIARRPTVRHHYRGQKLALWLDLIPKINQGDGSNPSQHLLKN
SDNRSSFDDYPRLVPSLDNVFPSPPAMPPIAPIPSSVPNTGVWSTPSIFL
EETSENPDQLDSTHIEETGGNYGPLLDRADSELSTVLVGPVNNANNESKE
TSVPLSVVVAIGCSLLFLNILIFAGVCYQRER


Reference
    Title: Insights into bilaterian evolution from three spiralian genomes
    Simakov O, Marletaz F, Cho SJ, Edsinger-Gonzales E, Havlak P, Hellsten U, Kuo DH, Larsson T, Lv J and Rokhsar DS <16 more author(s)>
    Ref: Nature, 493:526, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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