Gene_Locus Report

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Gene_locus Report for: lacdb-q04b33

Lactobacillus delbrueckii Putative uncharacterized protein

Comment
Other strains: Lactobacillus delbrueckii subsp. bulgaricus (strains ATCC BAA-365; 2038; ND02; PB2003/044-T3-4), subsp. lactis DSM 20072


Relationship
Family|Mbeg1-like
Block| X
Position in NCBI Life Tree|Lactobacillus delbrueckii subsp. bulgaricus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus delbrueckii: N E > Lactobacillus delbrueckii subsp. bulgaricus: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP000412
2 UniProt : F0K1P4, F0HY41
2 UniProt : F0K1P4, F0HY41
2 Interpro : F0K1P4, F0HY41
2 Pfam : F0K1P4, F0HY41
2 PIRSF : F0K1P4, F0HY41
2 SUPERFAM : F0K1P4, F0HY41
Sequence
Graphical view for this peptide sequence: lacdb-q04b33
Colored MSA for Mbeg1-like (raw)
MTVSEIAEKYFASSFTGLDASQYQELFHLMSEADRFKDARLSHFNTVLTD
QCQFSALKIVLEDGTHYVAFRGTDDTLVGWREDFEISFKETKAQILGARY
LKDLLAGDSADYILGGHSKGGNLAEYAALNLPEDYRARIRAVYTFDSPGL
ASEAGVDYNDDFLQRVLRRYVPDFSIIGRLFEPREVDPVIVYSTNGNIAQ
HDTYSWKIKGSHFVTRKRPNPESRVYNQLINQWIGSASLEEREALTQDLF
DALAASGSSKINQLAKNGFGGFGAILLSVTNSSTRTKFILGNLFSSIWQL
IKNQQIGAALFSRDTMAGWLLVLLGIISLTAPNYAFKAFGVLAAVGGIIF
SVNHILTVSVSTFKPQQKRFFLITYLVLFAVSIALLSSNQLLVFLAHYFL
GAFLLFYAYGRSHKIILRRQTGAFRMIITGAEAVISFALGIIVIINPEYF
NHQSIIEIGILLIIYGAFKLVTELFNHRPQIPKKHR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTVSEIAEKYFASSFTGLDASQYQELFHLMSEADRFKDARLSHFNTVLTD
QCQFSALKIVLEDGTHYVAFRGTDDTLVGWREDFEISFKETKAQILGARY
LKDLLAGDSADYILGGHSKGGNLAEYAALNLPEDYRARIRAVYTFDSPGL
ASEAGVDYNDDFLQRVLRRYVPDFSIIGRLFEPREVDPVIVYSTNGNIAQ
HDTYSWKIKGSHFVTRKRPNPESRVYNQLINQWIGSASLEEREALTQDLF
DALAASGSSKINQLAKNGFGGFGAILLSVTNSSTRTKFILGNLFSSIWQL
IKNQQIGAALFSRDTMAGWLLVLLGIISLTAPNYAFKAFGVLAAVGGIIF
SVNHILTVSVSTFKPQQKRFFLITYLVLFAVSIALLSSNQLLVFLAHYFL
GAFLLFYAYGRSHKIILRRQTGAFRMIITGAEAVISFALGIIVIINPEYF
NHQSIIEIGILLIIYGAFKLVTELFNHRPQIPKKHR


Reference
    Title: Comparative genomics of the lactic acid bacteria
    Makarova K, Slesarev A, Wolf Y, Sorokin A, Mirkin B, Koonin E, Pavlov A, Pavlova N, Karamychev V and Mills D <40 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 103:15611, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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