Gene_Locus Report

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Gene_locus Report for: horvu-cbp1

Hordeum vulgare (Barley) serine carboxypeptidase I, CP-MI

Comment
Other strains: var. distichum (Two-rowed barley)


Relationship
Family|Carboxypeptidase_S10
Block| X
Position in NCBI Life Tree|Hordeum vulgare
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Pooideae: N E > Triticodae: N E > Triticeae: N E > Hordeinae: N E > Hordeum: N E > Hordeum vulgare: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : Y09603, J03897
2 UniProt : P07519, F2DJ52
1 Ncbi-nid : 1731987
1 Ncbi-pid : 1731988
2 UniProt : P07519, F2DJ52
2 Interpro : P07519, F2DJ52
2 Pfam : P07519, F2DJ52
2 PIRSF : P07519, F2DJ52
2 SUPERFAM : P07519, F2DJ52
Sequence
Graphical view for this peptide sequence: horvu-cbp1
Colored MSA for Carboxypeptidase_S10 (raw)
MARCRRRSGCTAGAALLLLLALALSGGGGAAPQGAEVTGLPGFDGALPSK
HYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFDGFVY
EHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVS
DYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHE
VVKGIQGGAKPTINFKGYMVGNGVCDTIFDGNALVPFAHGMGLISDEIYQ
QASTSCHGNYWNATDGKCDTAISKIESLISGLNIYDILEPCYHSRSIKEV
NLQNSKLPQSFKDLGTTNKPFPVRTRMLGRAWPLRAPVKAGRVPSWQEVA
SGVPCMSDEVATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGS
MIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWI
TNGQVSGYTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWLAGSKL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MARCRRRSGCTAGAALLLLLALALSGGGGAAPQGAEVTGLPGFDGALPSK
HYAGYVTVDEGHGRNLFYYVVESERDPGKDPVVLWLNGGPGCSSFDGFVY
EHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVS
DYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTLSHE
VVKGIQGGAKPTINFKGYMVGNGVCDTIFDGNALVPFAHGMGLISDEIYQ
QASTSCHGNYWNATDGKCDTAISKIESLISGLNIYDILEPCYHSRSIKEV
NLQNSKLPQSFKDLGTTNKPFPVRTRMLGRAWPLRAPVKAGRVPSWQEVA
SGVPCMSDEVATAWLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGS
MIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWI
TNGQVSGYTEGYEHGLTFATIKGAGHTVPEYKPQEAFAFYSRWLAGSKL


References
    Title: The A- and B-chains of carboxypeptidase I from germinated barley originate from a single precursor polypeptide
    Doan NP, Fincher GB
    Ref: Journal of Biological Chemistry, 263:11106, 1988 : PubMed

            

    Title: Primary structure of carboxypeptidase I from malted barley
    Sorensen SB, Breddam K, Svensen I
    Ref: Carlsberg Res Commun, 51:475, 1986 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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