Gene_Locus Report

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Gene_locus Report for: horse-f7afw6

Equus caballus (Horse) Uncharacterized protein

Relationship
Family|NLS3-Tex30
Block| X
Position in NCBI Life Tree|Equus caballus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Laurasiatheria: N E > Perissodactyla: N E > Equidae: N E > Equus [genus]: N E > Equus [subgenus]: N E > Equus caballus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 UniProt : F7AFW6, F7AFY9
2 UniProt : F7AFW6, F7AFY9
2 Interpro : F7AFW6, F7AFY9
2 Pfam : F7AFW6, F7AFY9
2 PIRSF : F7AFW6, F7AFY9
2 SUPERFAM : F7AFW6, F7AFY9
Sequence
Graphical view for this peptide sequence: horse-f7afw6
Colored MSA for NLS3-Tex30 (raw)
NKPSKLPGSPLILIASSGPSSSVFPTSRRHRFWQSQLSCLGKVIPVATHL
LNNGCGVGVLQCLEHMIGAVRSKVLEVHSHFPHKPVILIGWNTGALVACH
VSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCH
PEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQD
EIVDFLTGVLTRA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

NKPSKLPGSPLILIASSGPSSSVFPTSRRHRFWQSQLSCLGKVIPVATHL
LNNGCGVGVLQCLEHMIGAVRSKVLEVHSHFPHKPVILIGWNTGALVACH
VSVMEYVTAVVCLGFPLLTVDGPRGDVDDPLLDMKTPVLFVIGQNSLQCH
PEAMEDFREKIRAENSLVVVGGADDNLRISKAKKKSEGLTQSMVDRCIQD
EIVDFLTGVLTRA


Reference
    Title: Genome sequence, comparative analysis, and population genetics of the domestic horse
    Wade CM, Giulotto E, Sigurdsson S, Zoli M, Gnerre S, Imsland F, Lear TL, Adelson DL, Bailey E and Lindblad-Toh K <48 more author(s)>
    Ref: Science, 326:865, 2009 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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