Gene_Locus Report

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Gene_locus Report for: hetgl-ACHE2

Heterodera glycines (Soybean cyst nematode worm) Acetylcholinesterase

Relationship
Family|ACHE
Block| C
Position in NCBI Life Tree|Heterodera glycines
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Tylenchida: N E > Tylenchina: N E > Tylenchoidea: N E > Heteroderidae: N E > Heteroderinae: N E > Heterodera: N E > Heterodera glycines: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : FJ499506
1 UniProt : C0JXB0
1 UniProt : C0JXB0
1 Interpro : C0JXB0
1 Pfam : C0JXB0
1 PIRSF : C0JXB0
1 SUPERFAM : C0JXB0
Sequence
Graphical view for this peptide sequence: hetgl-ACHE2
Colored MSA for ACHE (raw)
MPRKRQHQSIFLFDGRRQFVANHHHHLLLLVVLFILLCFCSPSVRAIPSA
SSTQQRHHQQRLTAPMLNGDEPPLVVTKLGKIRGFNQKFNGKTVRTFLGV
PYAQRPIGGLRFAIPKMIDRWEGELEATSSARTCFYPIDTMFPDFPGAEM
WNPPNELDEDCLAMNIWVPEDHDGTVMVWIYGGGFYSGSPSLDLYDGRVL
ASHERTIVVNINYRLGAFGFLYLGDGSAAPGNMGLLDQQLALRWINDNIA
QFGGNPNKVTLFGESAGGASAAAHLFAPDSHRLFRSLIAKSGAIVNNWAT
KPKVAIRDISMRLAHRLNCSMSTMVDWKRRRRHRHRPRRQRHDRRRRSGP
SPDNNSDDEEGTVAVANQVIACMSRVPAQIIQRESDHISATLLLPMNFAF
VPIDEDANFFKGNLFEKLQRKEFKKDVSIMLGTVRDEGTYWLPYYLHKYG
FGFNHTISPEDQYNQALVTEAEYTKAFDAFLPYFGNSQLVRHALMHAYAR
ITPDHNHAKAVERWRDGVARFLGDYFFTCALIEFADIVSENIFGSVFMYY
FVKRSSANPWPRWMGIMHGYEIEYVFGMPFRHPQAYDQKELDMERAFSAK
IMDFWGRFARTGEPIEFWPKYNRITRKSLVLSDEIARGNSHRIYVDVHGK
LCRLLEEAQALARLAPDQRQVRLSARGPISTEADLVAVAGHRMAPGIDMA
SLNTWHRASSPSLNSATADQRNLHRPITFLTFGTLLTVSMASPLIIIPPN
KFYLFISISHFL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPRKRQHQSIFLFDGRRQFVANHHHHLLLLVVLFILLCFCSPSVRAIPSA
SSTQQRHHQQRLTAPMLNGDEPPLVVTKLGKIRGFNQKFNGKTVRTFLGV
PYAQRPIGGLRFAIPKMIDRWEGELEATSSARTCFYPIDTMFPDFPGAEM
WNPPNELDEDCLAMNIWVPEDHDGTVMVWIYGGGFYSGSPSLDLYDGRVL
ASHERTIVVNINYRLGAFGFLYLGDGSAAPGNMGLLDQQLALRWINDNIA
QFGGNPNKVTLFGESAGGASAAAHLFAPDSHRLFRSLIAKSGAIVNNWAT
KPKVAIRDISMRLAHRLNCSMSTMVDWKRRRRHRHRPRRQRHDRRRRSGP
SPDNNSDDEEGTVAVANQVIACMSRVPAQIIQRESDHISATLLLPMNFAF
VPIDEDANFFKGNLFEKLQRKEFKKDVSIMLGTVRDEGTYWLPYYLHKYG
FGFNHTISPEDQYNQALVTEAEYTKAFDAFLPYFGNSQLVRHALMHAYAR
ITPDHNHAKAVERWRDGVARFLGDYFFTCALIEFADIVSENIFGSVFMYY
FVKRSSANPWPRWMGIMHGYEIEYVFGMPFRHPQAYDQKELDMERAFSAK
IMDFWGRFARTGEPIEFWPKYNRITRKSLVLSDEIARGNSHRIYVDVHGK
LCRLLEEAQALARLAPDQRQVRLSARGPISTEADLVAVAGHRMAPGIDMA
SLNTWHRASSPSLNSATADQRNLHRPITFLTFGTLLTVSMASPLIIIPPN
KFYLFISISHFL


Reference
    Title: Functional characterisation of a cyst nematode acetylcholinesterase gene using Caenorhabditis elegans as a heterologous system
    Costa JC, Lilley CJ, Atkinson HJ, Urwin PE
    Ref: International Journal for Parasitology, 39:849, 2009 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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