Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: glopa-a0a183c6h4

Globodera pallida (Potato cyst nematode). Carboxylic ester hydrolase

Relationship
Family|ACHE
Block| C
Position in NCBI Life Tree|Globodera pallida
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Tylenchida: N E > Tylenchina: N E > Tylenchoidea: N E > Heteroderidae: N E > Heteroderinae: N E > Globodera: N E > Globodera pallida: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 UniProt : A0A183C6H4
1 UniProt : A0A183C6H4
1 Interpro : A0A183C6H4
1 Pfam : A0A183C6H4
1 PIRSF : A0A183C6H4
1 SUPERFAM : A0A183C6H4
Sequence
Graphical view for this peptide sequence: glopa-a0a183c6h4
Colored MSA for ACHE (raw)
MSKKAPFLSTFVSSLLLLLFIIFVHITEDFASLSSTHQSNVPVEIELVNG
HLRGIESIFLHKRVRSFLGVPFAEPPVGELRFRPPQPKRPWNGTVEAITL
SPACYQGRDTYNESFWGSEMWNANTPISEDCLYMNIWAPAEAKNLTVMVW
FFGGGFYYGSPSLILYDGKALSLEANVIVVNINYRLGPFGYLFLDNEAVP
GNMGMLDQQLALHWIRDNIAAFGGDPKMVTIFGESAGASSIVAHLIAPNS
QGLFQNGILQSGSLDNKWSMDTPRRAYEKSIELVRLVGCNRTGLADAIRC
LRRIPPTEFTEQLWNIPLNFLEFPLVIVSRDANFFSAEDAFIALRKRHYA
QDVNLMIGINHDEGTFWNIYNIPKFFDVSHQPKLSLENFNECVQTAFSRL
PDIVREAASHVYLGTRRCEYETGFHQNLADQVNQMVGDYFFTCDSIWLAD
QLDNAPARVYIYYFDQTSSANPWPKWTGVMHGYEIEYVFGVPIYNGTAGY
TQRERTLSEKMVQLWSSFATTGIPSLDHRERNARAASLATIPLTEQPSLA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSKKAPFLSTFVSSLLLLLFIIFVHITEDFASLSSTHQSNVPVEIELVNG
HLRGIESIFLHKRVRSFLGVPFAEPPVGELRFRPPQPKRPWNGTVEAITL
SPACYQGRDTYNESFWGSEMWNANTPISEDCLYMNIWAPAEAKNLTVMVW
FFGGGFYYGSPSLILYDGKALSLEANVIVVNINYRLGPFGYLFLDNEAVP
GNMGMLDQQLALHWIRDNIAAFGGDPKMVTIFGESAGASSIVAHLIAPNS
QGLFQNGILQSGSLDNKWSMDTPRRAYEKSIELVRLVGCNRTGLADAIRC
LRRIPPTEFTEQLWNIPLNFLEFPLVIVSRDANFFSAEDAFIALRKRHYA
QDVNLMIGINHDEGTFWNIYNIPKFFDVSHQPKLSLENFNECVQTAFSRL
PDIVREAASHVYLGTRRCEYETGFHQNLADQVNQMVGDYFFTCDSIWLAD
QLDNAPARVYIYYFDQTSSANPWPKWTGVMHGYEIEYVFGVPIYNGTAGY
TQRERTLSEKMVQLWSSFATTGIPSLDHRERNARAASLATIPLTEQPSLA



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer