Gene_Locus Report

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Gene_locus Report for: glopa-a0a183bmd8

Globodera pallida (Potato cyst nematode). Carboxylic ester hydrolase

Relationship
Family|ACHE
Block| C
Position in NCBI Life Tree|Globodera pallida
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Tylenchida: N E > Tylenchina: N E > Tylenchoidea: N E > Heteroderidae: N E > Heteroderinae: N E > Globodera: N E > Globodera pallida: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 UniProt : A0A183BMD8
1 UniProt : A0A183BMD8
1 Interpro : A0A183BMD8
1 Pfam : A0A183BMD8
1 PIRSF : A0A183BMD8
1 SUPERFAM : A0A183BMD8
Sequence
Graphical view for this peptide sequence: glopa-a0a183bmd8
Colored MSA for ACHE (raw)
MLAPAEVICVYFRNIHRSIFTLCIINSIQSVGSSVPYVTLQDGSPLFGAY
VQAATGKTVTQFLGVPFAEPPIGKLRFRRPVPKKPWRNQWNATAFRDSCV
QSPDTYFGDFFGATMWNSNVPCSEDCLYLNIYVPGEMDAARRLPVLFWIY
GGGFWSGAASLNVYDGKILCSEEEVIVVTVNYRVTVFGFLYLGREEAPGN
MGLWDQLLGLKWAQQNIESFGGDPALITLFGESAGAASINMHMLSPRSQP
FFARAIIQSGSATAPWAVENKQVALHRAVILYDYMKCGGAKEKMSQLAPD
LWNMDAVLECLLTASSERLRDAEWSPVMEFADFPWVPVIDGDFLEQSVNS
ALKQGNFKRTQLLAGSNTDEAIYFIVYQLADIFPPSEFFHKKEFIGSREK
WLKSISNLLPRQILKSSLSLQAIVHQYEPDGELPIQSWQWVDSLDKMLGD
FLFTCNVNEFALAHSEHGASTYYYMFSHRDSQQTWPAWMGVLHGYEINFI
FGEPYNRKQFNYSREERELSSRFMRYWANFARTGDPNRNQDGSYTADTWP
TYNAKSMEYMNLSVESDYVQRGARRIGTGPRRKQCQFWKQLVPKLLLLSA
DLGESFIRWKQNMERWEHEYITDWEAAMNRWAQYQSYRDRDVADGEEGGC
VGGGGR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLAPAEVICVYFRNIHRSIFTLCIINSIQSVGSSVPYVTLQDGSPLFGAY
VQAATGKTVTQFLGVPFAEPPIGKLRFRRPVPKKPWRNQWNATAFRDSCV
QSPDTYFGDFFGATMWNSNVPCSEDCLYLNIYVPGEMDAARRLPVLFWIY
GGGFWSGAASLNVYDGKILCSEEEVIVVTVNYRVTVFGFLYLGREEAPGN
MGLWDQLLGLKWAQQNIESFGGDPALITLFGESAGAASINMHMLSPRSQP
FFARAIIQSGSATAPWAVENKQVALHRAVILYDYMKCGGAKEKMSQLAPD
LWNMDAVLECLLTASSERLRDAEWSPVMEFADFPWVPVIDGDFLEQSVNS
ALKQGNFKRTQLLAGSNTDEAIYFIVYQLADIFPPSEFFHKKEFIGSREK
WLKSISNLLPRQILKSSLSLQAIVHQYEPDGELPIQSWQWVDSLDKMLGD
FLFTCNVNEFALAHSEHGASTYYYMFSHRDSQQTWPAWMGVLHGYEINFI
FGEPYNRKQFNYSREERELSSRFMRYWANFARTGDPNRNQDGSYTADTWP
TYNAKSMEYMNLSVESDYVQRGARRIGTGPRRKQCQFWKQLVPKLLLLSA
DLGESFIRWKQNMERWEHEYITDWEAAMNRWAQYQSYRDRDVADGEEGGC
VGGGGR



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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