Gene_Locus Report

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Gene_locus Report for: gibf5-s0ekc4

Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) (Bakanae and foot rot disease fungus) (Fusarium fujikuroi) Uncharacterized protein

Relationship
Family|GTSAGmotif
Block| H
Position in NCBI Life Tree|Gibberella fujikuroi
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Pezizomycotina: N E > leotiomyceta: N E > sordariomyceta: N E > Sordariomycetes: N E > Hypocreomycetidae: N E > Hypocreales: N E > Nectriaceae: N E > Fusarium: N E > Fusarium fujikuroi species complex: N E > Fusarium fujikuroi: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : HF679033
1 UniProt : S0EKC4
1 UniProt : S0EKC4
1 Interpro : S0EKC4
1 Pfam : S0EKC4
1 PIRSF : S0EKC4
1 SUPERFAM : S0EKC4
Sequence
Graphical view for this peptide sequence: gibf5-s0ekc4
Colored MSA for GTSAGmotif (raw)
MVSLIEGQKATLSPEAVDFLTKIRHPPLANTISSFITSPCRVPGLRQGFT
EKTAPGEAQLIEKHKIQVTEAIISGVSVAVIEPPVIKPEKQKKILFNVFG
GAFIMGSPRDRAALTMAVELGVRVYSVDYTKSPEAKYPEARDQCLAVYRE
LLRNGPPGGTPIDPSNIHAMGCSSGAHILVSMLLVARQKGFPMPTAGMYL
CTPALDLSGAGDSMVFNSLGRDIMPVSLLTGMVSQNYAPDGIDTKDPLYS
PIYADYDDSFPPTVITVGTRDFALSHGIRFYWKLREVGVKVELLVSEGMW
HGFNWDPVIPESIRARAAVIEFLENSQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MVSLIEGQKATLSPEAVDFLTKIRHPPLANTISSFITSPCRVPGLRQGFT
EKTAPGEAQLIEKHKIQVTEAIISGVSVAVIEPPVIKPEKQKKILFNVFG
GAFIMGSPRDRAALTMAVELGVRVYSVDYTKSPEAKYPEARDQCLAVYRE
LLRNGPPGGTPIDPSNIHAMGCSSGAHILVSMLLVARQKGFPMPTAGMYL
CTPALDLSGAGDSMVFNSLGRDIMPVSLLTGMVSQNYAPDGIDTKDPLYS
PIYADYDDSFPPTVITVGTRDFALSHGIRFYWKLREVGVKVELLVSEGMW
HGFNWDPVIPESIRARAAVIEFLENSQ


Reference
    Title: Deciphering the cryptic genome: genome-wide analyses of the rice pathogen Fusarium fujikuroi reveal complex regulation of secondary metabolism and novel metabolites
    Wiemann P, Sieber CM, von Bargen KW, Studt L, Niehaus EM, Espino JJ, Huss K, Michielse CB, Albermann S and Tudzynski B <18 more author(s)>
    Ref: PLoS Pathog, 9:e1003475, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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