Gene_Locus Report

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Gene_locus Report for: fusof-f9g6e6

Fusarium oxysporum (Panama disease fungus); Gibberella moniliformis Putative uncharacterized protein

Comment
Other strains: Fusarium oxysporum (Panama disease fungus) (Fusarium vascular wilt of tomato) (strains Fo5176; FOSC 3-a; Fo47; f. sp. (lycopersici (4287 / CBS 123668 / FGS 9935 / NRRL 34936; MN25); pisi HDV247; melonis 26406; raphani 54005; radicis-lycopersici 26381; conglutinans race 2 54008; cubense (race 4; tropical race 4); 54006; raphani 54005 vasinfectum 25433; Gibberella moniliformis (strain M3125 / FGSC 7600) (Maize ear and stalk rot fungus) (Fusarium verticillioides)


Relationship
Family|Fungal_carboxylesterase_lipase
Block| C
Position in NCBI Life Tree|Fusarium oxysporum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Pezizomycotina: N E > leotiomyceta: N E > sordariomyceta: N E > Sordariomycetes: N E > Hypocreomycetidae: N E > Hypocreales: N E > Nectriaceae: N E > Fusarium: N E > Fusarium oxysporum species complex: N E > Fusarium oxysporum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 11 more: AFQF01003518, KB726990, JH717840
>3 UniProt links 42 more: F9G6E6, N1RFA8, W9IVH3
>3 UniProt links 44 more: F9G6E6, N1RFA8, W9IVH3
>3 Interpro links 44 more: F9G6E6, N1RFA8, W9IVH3
>3 Pfam links 44 more: F9G6E6, N1RFA8, W9IVH3
>3 PIRSF links 44 more: F9G6E6, N1RFA8, W9IVH3
>3 SUPERFAM links 44 more: F9G6E6, N1RFA8, W9IVH3
Sequence
Graphical view for this peptide sequence: fusof-f9g6e6
Colored MSA for Fungal_carboxylesterase_lipase (raw)
MTAAPKQSDPASEEDSVHAPNNANNIHDEAAIKKQPGRKKWFIIGAIVFL
IVLILGLTLGLYYGLRKEHNVDETAAKDNTNQTPSPQPSDNPNNNSDDND
NNKDKGKSSDDDKEEPAKKREGPFVDLGYSKYEGNVLESNIHEYLGIRYA
KAPTGDLRWRAPEEPESTTGTLKAQEYAPYCPGVNDGLSSRIDEDCLFAN
VWTPANATSDSKLPVMVFFQSGGYIRNASPYVNGTQLISASNNNIIFVNF
NYRVGMFGFLASKEVKEDGHLNAGLMDQRFLLNWIQKHIEEFGGDPEHVI
LHGESAGAGSVALQLVAYGGKDEGLFAGAIAESTFMPGLPNPDDLQYQFD
RVVNATDCADADDTLKCLRGIKSTDLQAHNAKAPFDGRTYRSYFYWAPTT
DGDMFPDLPSKLYEKGEFVKVPLLSGSCTNEGSNYAVNAGSSAQFIRYMQ
NEYPYLTTEDTETILDLYPQEPKIVKHDTWFPSASRAYGEATFICPTNNI
LNAFAEHADPKTLWSYRYNVAIEEFTNDGYGVPHVSNAPAVFGPDMTAAK
AGPSYRTYNAPMVPIVQNYWISFVRSFDPNTHRDEDAPRWENWGDDQRRL
VFELNNNTMESVDKGQRERCEAWLDMSGSTKH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTAAPKQSDPASEEDSVHAPNNANNIHDEAAIKKQPGRKKWFIIGAIVFL
IVLILGLTLGLYYGLRKEHNVDETAAKDNTNQTPSPQPSDNPNNNSDDND
NNKDKGKSSDDDKEEPAKKREGPFVDLGYSKYEGNVLESNIHEYLGIRYA
KAPTGDLRWRAPEEPESTTGTLKAQEYAPYCPGVNDGLSSRIDEDCLFAN
VWTPANATSDSKLPVMVFFQSGGYIRNASPYVNGTQLISASNNNIIFVNF
NYRVGMFGFLASKEVKEDGHLNAGLMDQRFLLNWIQKHIEEFGGDPEHVI
LHGESAGAGSVALQLVAYGGKDEGLFAGAIAESTFMPGLPNPDDLQYQFD
RVVNATDCADADDTLKCLRGIKSTDLQAHNAKAPFDGRTYRSYFYWAPTT
DGDMFPDLPSKLYEKGEFVKVPLLSGSCTNEGSNYAVNAGSSAQFIRYMQ
NEYPYLTTEDTETILDLYPQEPKIVKHDTWFPSASRAYGEATFICPTNNI
LNAFAEHADPKTLWSYRYNVAIEEFTNDGYGVPHVSNAPAVFGPDMTAAK
AGPSYRTYNAPMVPIVQNYWISFVRSFDPNTHRDEDAPRWENWGDDQRRL
VFELNNNTMESVDKGQRERCEAWLDMSGSTKH


References
    Title: A highly conserved effector in Fusarium oxysporum is required for full virulence on Arabidopsis
    Thatcher LF, Gardiner DM, Kazan K, Manners JM
    Ref: Mol Plant Microbe Interact, 25:180, 2012 : PubMed

            

    Title: Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
    Ma LJ, van der Does HC, Borkovich KA, Coleman JJ, Daboussi MJ, Di Pietro A, Dufresne M, Freitag M, Grabherr M and Rep M <53 more author(s)>
    Ref: Nature, 464:367, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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