ecoli-yiel

Escherichia coli, Escherichia fergusonii, Isoamylase protein yieL

Comment

The hydrolase is attached in C-term of CBM_48 Glycoside hydrolase family 13 domain protein. || There are more than 1000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains.

Relationship

Family : A85-Feruloyl-Esterase

Block : X

Position in NCBI Life Tree : Escherichia coli

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Sequence

Peptide

MVMELNERNI TMNIKIAALT LAIASGISAQ WAIAADMPAS PAPTIPVKQY VTQVNADNSV TFRYFAPGAK NVSVVVGVPV PDNIHPMTKD EAGVWSWRTP ILKGNLYEYF FNVDGVRSID TGTAMTNPQR QVNSSMILVP GSYLDTRSVA HGDLIAITYH SNALQSERQM YVWTPPGYTG MGEPLPVLYF YHGFGDTGRS AIDQGRIPQI MDNLLAEGKI KPMLVVIPDT ETDAKGIIPE DFVPQERRKV FYPLNAKAAD RELMNDIIPL ISKRFNVRKD ADGRALAGLS QGGYQALVSG MNHLESFGWL ATFSGVTTTT VPDEGVAARL NDPAAINQQL RNFTVVVGDK DVVTGKDIAG LKTELEQKKI NFDYQEYPGL NHEMDVWRPA YAAFVQKLFK

References

Title : Genomics of rapid adaptation to antibiotics: convergent evolution and scalable sequence amplification - Laehnemann_2014_Genome.Biol.Evol_6_1287
Author(s) : Laehnemann D , Pena-Miller R , Rosenstiel P , Beardmore R , Jansen G , Schulenburg H
Ref : Genome Biol Evol , 6 :1287 , 2014
Abstract : Laehnemann_2014_Genome.Biol.Evol_6_1287
ESTHER : Laehnemann_2014_Genome.Biol.Evol_6_1287
PubMedSearch : Laehnemann_2014_Genome.Biol.Evol_6_1287
PubMedID: 24850796
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Complete Genome Sequences of Nitrofurantoin-Sensitive and -Resistant Escherichia coli ST540 and ST2747 Strains - Xavier_2014_Genome.Announc_2_e00239
Author(s) : Xavier BB , Vervoort J , Stewardson A , Adriaenssens N , Coenen S , Harbarth S , Goossens H , Malhotra-Kumar S
Ref : Genome Announc , 2 : , 2014
Abstract : Xavier_2014_Genome.Announc_2_e00239
ESTHER : Xavier_2014_Genome.Announc_2_e00239
PubMedSearch : Xavier_2014_Genome.Announc_2_e00239
PubMedID: 24723707
Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ycfp , ecoli-yiel

Title : Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes - Trees_2014_Genome.Announc_2_e00718
Author(s) : Trees E , Strockbine N , Changayil S , Ranganathan S , Zhao K , Weil R , Maccannell D , Sabol A , Schmidtke A , Martin H , Stripling D , Ribot EM , Gerner-Smidt P
Ref : Genome Announc , 2 : , 2014
Abstract : Trees_2014_Genome.Announc_2_e00718
ESTHER : Trees_2014_Genome.Announc_2_e00718
PubMedSearch : Trees_2014_Genome.Announc_2_e00718
PubMedID: 25103754
Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-ybff , ecoli-yiel , ecoli-ypt1 , ecoli-Z1930 , ecoli-YfhR

Title : Genome Sequences of Avian Pathogenic Escherichia coli Strains Isolated from Brazilian Commercial Poultry - Rojas_2013_Genome.Announc_1_e0011013
Author(s) : Rojas TC , Maluta RP , Parizzi LP , Koenigkan LV , Yang J , Yu J , Pereira GA , Dias da Silveira W
Ref : Genome Announc , 1 :e0011013 , 2013
Abstract : Rojas_2013_Genome.Announc_1_e0011013
ESTHER : Rojas_2013_Genome.Announc_1_e0011013
PubMedSearch : Rojas_2013_Genome.Announc_1_e0011013
PubMedID: 23516222
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-IROD , ecoli-IROE , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR

Title : Genome Sequences of Two Emerging Non-O157 Shiga Toxin-Producing Escherichia coli Strains - Cao_2013_Genome.Announc_1_E00200
Author(s) : Cao G , Ju W , Rump L , Zhao S , Zou L , Wang C , Strain E , Luo Y , Timme R , Allard M , Brown E , Meng J
Ref : Genome Announc , 1 :E00200 , 2013
Abstract : Cao_2013_Genome.Announc_1_E00200
ESTHER : Cao_2013_Genome.Announc_1_E00200
PubMedSearch : Cao_2013_Genome.Announc_1_E00200
PubMedID: 23682138
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR

Title : Draft Genome Sequences of Two O104:H21 Escherichia coli Isolates Causing Hemorrhagic Colitis during a 1994 Montana Outbreak Provide Insight into Their Pathogenicity - Gonzalez-Escalona_2013_Genome.Announc_1_e00805
Author(s) : Gonzalez-Escalona N , McFarland MA , Rump LV , Payne J , Andrzejewski D , Brown EW , Evans PS , Croley TR
Ref : Genome Announc , 1 : , 2013
Abstract : Gonzalez-Escalona_2013_Genome.Announc_1_e00805
ESTHER : Gonzalez-Escalona_2013_Genome.Announc_1_e00805
PubMedSearch : Gonzalez-Escalona_2013_Genome.Announc_1_e00805
PubMedID: 24092795
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecolx-e1iyu3

Title : Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131 - Andersen_2013_Genome.Announc_1_e00988
Author(s) : Andersen PS , Stegger M , Aziz M , Contente-Cuomo T , Gibbons HS , Keim P , Sokurenko EV , Johnson JR , Price LB
Ref : Genome Announc , 1 :e00988 , 2013
Abstract : Andersen_2013_Genome.Announc_1_e00988
ESTHER : Andersen_2013_Genome.Announc_1_e00988
PubMedSearch : Andersen_2013_Genome.Announc_1_e00988
PubMedID: 24309736
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0

Title : Adaptive evolution of Escherichia coli to an alpha-peptide\/beta-peptoid peptidomimetic induces stable resistance - Hein-Kristensen_2013_PLoS.One_8_e73620
Author(s) : Hein-Kristensen L , Franzyk H , Holch A , Gram L
Ref : PLoS ONE , 8 :e73620 , 2013
Abstract : Hein-Kristensen_2013_PLoS.One_8_e73620
ESTHER : Hein-Kristensen_2013_PLoS.One_8_e73620
PubMedSearch : Hein-Kristensen_2013_PLoS.One_8_e73620
PubMedID: 24040003
Gene_locus related to this paper: ecoli-IROD , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Adaptive mutations and replacements of virulence traits in the Escherichia coli O104:H4 outbreak population - Guy_2013_PLoS.One_8_e63027
Author(s) : Guy L , Jernberg C , Arven Norling J , Ivarsson S , Hedenstrom I , Melefors O , Liljedahl U , Engstrand L , Andersson SG
Ref : PLoS ONE , 8 :e63027 , 2013
Abstract : Guy_2013_PLoS.One_8_e63027
ESTHER : Guy_2013_PLoS.One_8_e63027
PubMedSearch : Guy_2013_PLoS.One_8_e63027
PubMedID: 23675451
Gene_locus related to this paper: ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia

Title : Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes - Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
Author(s) : Turner PC , Yomano LP , Jarboe LR , York SW , Baggett CL , Moritz BE , Zentz EB , Shanmugam KT , Ingram LO
Ref : J Ind Microbiol Biotechnol , 39 :629 , 2012
Abstract : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
ESTHER : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
PubMedSearch : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629
PubMedID: 22075923
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Draft genome sequences of the diarrheagenic Escherichia coli collection - Hazen_2012_J.Bacteriol_194_3026
Author(s) : Hazen TH , Sahl JW , Redman JC , Morris CR , Daugherty SC , Chibucos MC , Sengamalay NA , Fraser-Liggett CM , Steinsland H , Whittam TS , Whittam B , Manning SD , Rasko DA
Ref : Journal of Bacteriology , 194 :3026 , 2012
Abstract : Hazen_2012_J.Bacteriol_194_3026
ESTHER : Hazen_2012_J.Bacteriol_194_3026
PubMedSearch : Hazen_2012_J.Bacteriol_194_3026
PubMedID: 22582382
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing - Ju_2012_J.Clin.Microbiol_50_4123
Author(s) : Ju W , Cao G , Rump L , Strain E , Luo Y , Timme R , Allard M , Zhao S , Brown E , Meng J
Ref : J Clin Microbiol , 50 :4123 , 2012
Abstract : Ju_2012_J.Clin.Microbiol_50_4123
ESTHER : Ju_2012_J.Clin.Microbiol_50_4123
PubMedSearch : Ju_2012_J.Clin.Microbiol_50_4123
PubMedID: 23052305
Gene_locus related to this paper: ecoli-d7xp23 , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR

Title : Genome sequence of Escherichia coli J53, a reference strain for genetic studies - Yi_2012_J.Bacteriol_194_3742
Author(s) : Yi H , Cho YJ , Yong D , Chun J
Ref : Journal of Bacteriology , 194 :3742 , 2012
Abstract : Yi_2012_J.Bacteriol_194_3742
ESTHER : Yi_2012_J.Bacteriol_194_3742
PubMedSearch : Yi_2012_J.Bacteriol_194_3742
PubMedID: 22740669
Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel

Title : Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011 - Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065
Author(s) : Grad YH , Lipsitch M , Feldgarden M , Arachchi HM , Cerqueira GC , FitzGerald M , Godfrey P , Haas BJ , Murphy CI , Russ C , Sykes S , Walker BJ , Wortman JR , Young S , Zeng Q , Abouelleil A , Bochicchio J , Chauvin S , Desmet T , Gujja S , McCowan C , Montmayeur A , Steelman S , Frimodt-Moller J , Petersen AM , Struve C , Krogfelt KA , Bingen E , Weill FX , Lander ES , Nusbaum C , Birren BW , Hung DT , Hanage WP
Ref : Proc Natl Acad Sci U S A , 109 :3065 , 2012
Abstract : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065
ESTHER : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065
PubMedSearch : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065
PubMedID: 22315421
Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR

Title : Draft genome sequence of Escherichia coli W26, an enteric strain isolated from cow feces - Kim_2012_J.Bacteriol_194_5149
Author(s) : Kim M , Yi H , Cho YJ , Jang J , Hur HG , Chun J
Ref : Journal of Bacteriology , 194 :5149 , 2012
Abstract : Kim_2012_J.Bacteriol_194_5149
ESTHER : Kim_2012_J.Bacteriol_194_5149
PubMedSearch : Kim_2012_J.Bacteriol_194_5149
PubMedID: 22933771
Gene_locus related to this paper: ecoli-fes , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-yuar

Title : Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from Ileal Crohn's disease biopsy tissue - Krause_2011_J.Bacteriol_193_583
Author(s) : Krause DO , Little AC , Dowd SE , Bernstein CN
Ref : Journal of Bacteriology , 193 :583 , 2011
Abstract : Krause_2011_J.Bacteriol_193_583
ESTHER : Krause_2011_J.Bacteriol_193_583
PubMedSearch : Krause_2011_J.Bacteriol_193_583
PubMedID: 21075930
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-entf , ecoli-IROD , ecoli-IROE , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6

Title : Genome of multidrug-resistant uropathogenic Escherichia coli strain NA114 from India - Avasthi_2011_J.Bacteriol_193_4272
Author(s) : Avasthi TS , Kumar N , Baddam R , Hussain A , Nandanwar N , Jadhav S , Ahmed N
Ref : Journal of Bacteriology , 193 :4272 , 2011
Abstract : Avasthi_2011_J.Bacteriol_193_4272
ESTHER : Avasthi_2011_J.Bacteriol_193_4272
PubMedSearch : Avasthi_2011_J.Bacteriol_193_4272
PubMedID: 21685291
Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0

Title : The genome sequence of E. coli W (ATCC 9637): comparative genome analysis and an improved genome-scale reconstruction of E. coli - Archer_2011_BMC.Genomics_12_9
Author(s) : Archer CT , Kim JF , Jeong H , Park JH , Vickers CE , Lee SY , Nielsen LK
Ref : BMC Genomics , 12 :9 , 2011
Abstract : Archer_2011_BMC.Genomics_12_9
ESTHER : Archer_2011_BMC.Genomics_12_9
PubMedSearch : Archer_2011_BMC.Genomics_12_9
PubMedID: 21208457
Gene_locus related to this paper: ecoli-entf , ecoli-fes , ecoli-yafa , ecoli-yeiG , ecoli-yhet , ecoli-yiel

Title : Origins of the E. coli strain causing an outbreak of hemolytic-uremic syndrome in Germany - Rasko_2011_N.Engl.J.Med_365_709
Author(s) : Rasko DA , Webster DR , Sahl JW , Bashir A , Boisen N , Scheutz F , Paxinos EE , Sebra R , Chin CS , Iliopoulos D , Klammer A , Peluso P , Lee L , Kislyuk AO , Bullard J , Kasarskis A , Wang S , Eid J , Rank D , Redman JC , Steyert SR , Frimodt-Moller J , Struve C , Petersen AM , Krogfelt KA , Nataro JP , Schadt EE , Waldor MK
Ref : N Engl J Med , 365 :709 , 2011
Abstract : Rasko_2011_N.Engl.J.Med_365_709
ESTHER : Rasko_2011_N.Engl.J.Med_365_709
PubMedSearch : Rasko_2011_N.Engl.J.Med_365_709
PubMedID: 21793740
Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ycfp , ecoli-YFBB , ecoli-yiel , ecoli-yqia

Title : Genome sequence of adherent-invasive Escherichia coli and comparative genomic analysis with other E. coli pathotypes - Nash_2010_BMC.Genomics_11_667
Author(s) : Nash JH , Villegas A , Kropinski AM , Aguilar-Valenzuela R , Konczy P , Mascarenhas M , Ziebell K , Torres AG , Karmali MA , Coombes BK
Ref : BMC Genomics , 11 :667 , 2010
Abstract : Nash_2010_BMC.Genomics_11_667
ESTHER : Nash_2010_BMC.Genomics_11_667
PubMedSearch : Nash_2010_BMC.Genomics_11_667
PubMedID: 21108814
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-IROD , ecoli-rdmC , ecoli-yafa , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecos5-d2nhh3

Title : A commensal gone bad: complete genome sequence of the prototypical enterotoxigenic Escherichia coli strain H10407 - Crossman_2010_J.Bacteriol_192_5822
Author(s) : Crossman LC , Chaudhuri RR , Beatson SA , Wells TJ , Desvaux M , Cunningham AF , Petty NK , Mahon V , Brinkley C , Hobman JL , Savarino SJ , Turner SM , Pallen MJ , Penn CW , Parkhill J , Turner AK , Johnson TJ , Thomson NR , Smith SG , Henderson IR
Ref : Journal of Bacteriology , 192 :5822 , 2010
Abstract : Crossman_2010_J.Bacteriol_192_5822
ESTHER : Crossman_2010_J.Bacteriol_192_5822
PubMedSearch : Crossman_2010_J.Bacteriol_192_5822
PubMedID: 20802035
Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia

Title : Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2 - Toh_2010_J.Bacteriol_192_1165
Author(s) : Toh H , Oshima K , Toyoda A , Ogura Y , Ooka T , Sasamoto H , Park SH , Iyoda S , Kurokawa K , Morita H , Itoh K , Taylor TD , Hayashi T , Hattori M
Ref : Journal of Bacteriology , 192 :1165 , 2010
Abstract : Toh_2010_J.Bacteriol_192_1165
ESTHER : Toh_2010_J.Bacteriol_192_1165
PubMedSearch : Toh_2010_J.Bacteriol_192_1165
PubMedID: 20008064
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecos5-d2nhh3 , yerpe-YBTT , ecolx-f4suw9

Title : Genome sequences of Escherichia coli B strains REL606 and BL21(DE3) - Jeong_2009_J.Mol.Biol_394_644
Author(s) : Jeong H , Barbe V , Lee CH , Vallenet D , Yu DS , Choi SH , Couloux A , Lee SW , Yoon SH , Cattolico L , Hur CG , Park HS , Segurens B , Kim SC , Oh TK , Lenski RE , Studier FW , Daegelen P , Kim JF
Ref : Journal of Molecular Biology , 394 :644 , 2009
Abstract : Jeong_2009_J.Mol.Biol_394_644
ESTHER : Jeong_2009_J.Mol.Biol_394_644
PubMedSearch : Jeong_2009_J.Mol.Biol_394_644
PubMedID: 19786035
Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli - Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
Author(s) : Ogura Y , Ooka T , Iguchi A , Toh H , Asadulghani M , Oshima K , Kodama T , Abe H , Nakayama K , Kurokawa K , Tobe T , Hattori M , Hayashi T
Ref : Proc Natl Acad Sci U S A , 106 :17939 , 2009
Abstract : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
ESTHER : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
PubMedSearch : Ogura_2009_Proc.Natl.Acad.Sci.U.S.A_106_17939
PubMedID: 19815525
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C2429 , ecoli-C4836 , ecoli-d7xp23 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR , yerpe-YBTT

Title : Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348\/69 - Iguchi_2009_J.Bacteriol_191_347
Author(s) : Iguchi A , Thomson NR , Ogura Y , Saunders D , Ooka T , Henderson IR , Harris D , Asadulghani M , Kurokawa K , Dean P , Kenny B , Quail MA , Thurston S , Dougan G , Hayashi T , Parkhill J , Frankel G
Ref : Journal of Bacteriology , 191 :347 , 2009
Abstract : Iguchi_2009_J.Bacteriol_191_347
ESTHER : Iguchi_2009_J.Bacteriol_191_347
PubMedSearch : Iguchi_2009_J.Bacteriol_191_347
PubMedID: 18952797
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR

Title : Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12 - Ferenci_2009_J.Bacteriol_191_4025
Author(s) : Ferenci T , Zhou Z , Betteridge T , Ren Y , Liu Y , Feng L , Reeves PR , Wang L
Ref : Journal of Bacteriology , 191 :4025 , 2009
Abstract : Ferenci_2009_J.Bacteriol_191_4025
ESTHER : Ferenci_2009_J.Bacteriol_191_4025
PubMedSearch : Ferenci_2009_J.Bacteriol_191_4025
PubMedID: 19376874
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse - Durfee_2008_J.Bacteriol_190_2597
Author(s) : Durfee T , Nelson R , Baldwin S , Plunkett G, 3rd , Burland V , Mau B , Petrosino JF , Qin X , Muzny DM , Ayele M , Gibbs RA , Csorgo B , Posfai G , Weinstock GM , Blattner FR
Ref : Journal of Bacteriology , 190 :2597 , 2008
Abstract : Durfee_2008_J.Bacteriol_190_2597
ESTHER : Durfee_2008_J.Bacteriol_190_2597
PubMedSearch : Durfee_2008_J.Bacteriol_190_2597
PubMedID: 18245285
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult - Oshima_2008_DNA.Res_15_375
Author(s) : Oshima K , Toh H , Ogura Y , Sasamoto H , Morita H , Park SH , Ooka T , Iyoda S , Taylor TD , Hayashi T , Itoh K , Hattori M
Ref : DNA Research , 15 :375 , 2008
Abstract : Oshima_2008_DNA.Res_15_375
ESTHER : Oshima_2008_DNA.Res_15_375
PubMedSearch : Oshima_2008_DNA.Res_15_375
PubMedID: 18931093
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR

Title : The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates - Rasko_2008_J.Bacteriol_190_6881
Author(s) : Rasko DA , Rosovitz MJ , Myers GS , Mongodin EF , Fricke WF , Gajer P , Crabtree J , Sebaihia M , Thomson NR , Chaudhuri R , Henderson IR , Sperandio V , Ravel J
Ref : Journal of Bacteriology , 190 :6881 , 2008
Abstract : Rasko_2008_J.Bacteriol_190_6881
ESTHER : Rasko_2008_J.Bacteriol_190_6881
PubMedSearch : Rasko_2008_J.Bacteriol_190_6881
PubMedID: 18676672
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z2445 , ecoli-YfhR

Title : The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes - Johnson_2007_J.Bacteriol_189_3228
Author(s) : Johnson TJ , Kariyawasam S , Wannemuehler Y , Mangiamele P , Johnson SJ , Doetkott C , Skyberg JA , Lynne AM , Johnson JR , Nolan LK
Ref : Journal of Bacteriology , 189 :3228 , 2007
Abstract : Johnson_2007_J.Bacteriol_189_3228
ESTHER : Johnson_2007_J.Bacteriol_189_3228
PubMedSearch : Johnson_2007_J.Bacteriol_189_3228
PubMedID: 17293413
Gene_locus related to this paper: ecok1-a1acc0 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT

Title : Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536 - Hochhut_2006_Mol.Microbiol_61_584
Author(s) : Hochhut B , Wilde C , Balling G , Middendorf B , Dobrindt U , Brzuszkiewicz E , Gottschalk G , Carniel E , Hacker J
Ref : Molecular Microbiology , 61 :584 , 2006
Abstract : Hochhut_2006_Mol.Microbiol_61_584
ESTHER : Hochhut_2006_Mol.Microbiol_61_584
PubMedSearch : Hochhut_2006_Mol.Microbiol_61_584
PubMedID: 16879640
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecolx-q707d7 , yerpe-YBTT

Title : Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110 - Hayashi_2006_Mol.Syst.Biol_2_2006 0007
Author(s) : Hayashi K , Morooka N , Yamamoto Y , Fujita K , Isono K , Choi S , Ohtsubo E , Baba T , Wanner BL , Mori H , Horiuchi T
Ref : Mol Syst Biol , 2 :2006 0007 , 2006
Abstract : Hayashi_2006_Mol.Syst.Biol_2_2006 0007
ESTHER : Hayashi_2006_Mol.Syst.Biol_2_2006 0007
PubMedSearch : Hayashi_2006_Mol.Syst.Biol_2_2006 0007
PubMedID: 16738553
Gene_locus related to this paper: ecoli-Aes , ecoli-dlhh , ecoli-mhpc , ecoli-ycfp , ecoli-yeiG , ecoli-yhet , ecoli-yiel , ecoli-ypfh , ecoli-yqia

Title : Identification of genes subject to positive selection in uropathogenic strains of Escherichia coli: a comparative genomics approach - Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
Author(s) : Chen SL , Hung CS , Xu J , Reigstad CS , Magrini V , Sabo A , Blasiar D , Bieri T , Meyer RR , Ozersky P , Armstrong JR , Fulton RS , Latreille JP , Spieth J , Hooton TM , Mardis ER , Hultgren SJ , Gordon JI
Ref : Proc Natl Acad Sci U S A , 103 :5977 , 2006
Abstract : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
ESTHER : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
PubMedSearch : Chen_2006_Proc.Natl.Acad.Sci.U.S.A_103_5977
PubMedID: 16585510
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT

Title : Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli - Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
Author(s) : Welch RA , Burland V , Plunkett G, 3rd , Redford P , Roesch P , Rasko D , Buckles EL , Liou SR , Boutin A , Hackett J , Stroud D , Mayhew GF , Rose DJ , Zhou S , Schwartz DC , Perna NT , Mobley HL , Donnenberg MS , Blattner FR
Ref : Proc Natl Acad Sci U S A , 99 :17020 , 2002
Abstract : Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
ESTHER : Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
PubMedSearch : Welch_2002_Proc.Natl.Acad.Sci.U.S.A_99_17020
PubMedID: 12471157
Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C3633 , ecoli-C3636 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , yerpe-YBTT , ecol6-a0a0h2vaz5

Title : The complete genome sequence of Escherichia coli K-12 - Blattner_1997_Science_277_1453
Author(s) : Blattner FR , Plunkett G, 3rd , Bloch CA , Perna NT , Burland V , Riley M , Collado-Vides J , Glasner JD , Rode CK , Mayhew GF , Gregor J , Davis NW , Kirkpatrick HA , Goeden MA , Rose DJ , Mau B , Shao Y
Ref : Science , 277 :1453 , 1997
Abstract : Blattner_1997_Science_277_1453
ESTHER : Blattner_1997_Science_277_1453
PubMedSearch : Blattner_1997_Science_277_1453
PubMedID: 9278503
Gene_locus related to this paper: ecoli-Aes , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. -
Author(s) : Burland VD , Plunkett G III , Daniels DL , Blattner FR
Ref : Genomics , 16 :551 , 1993
PubMedID: 7686882
Gene_locus related to this paper: ecoli-yiel