Escherichia coli, Escherichia fergusonii, putative enzyme (3.4.-) hypothetical protein YfhR peptidase Z3802
There are more than 1000 strains. Other Uniprot entries and list of strains can be found with the link: Other strains
MIKKSQGKVM ALPVNKRVPK ILFILFVVAF CVYLVPRVAI NFFYYPDDKI YGPDPWSAES VEFTAKDGTR LQGWFIPSST GPADNAIATI IHAHGNAGNM SAHWPLVSWL PERNFNVFMF DYRGFGKSKG TPSQAGLLDD TQSAINVVRH RSDVNPQRLV LFGQSIGGAN ILAVIGQGDR EGIRAVILDS TFASYATIAN QMIPGSGYLL DESYSGENYI ASVSPIPLLL IHGKADHVIP WQHSEKLYSL AKEPKRLILI PDGEHIDAFS DRHGDVYREQ MVNFILSALN PQN
| Title : Genomics of rapid adaptation to antibiotics: convergent evolution and scalable sequence amplification - Laehnemann_2014_Genome.Biol.Evol_6_1287 |
| Author(s) : Laehnemann D , Pena-Miller R , Rosenstiel P , Beardmore R , Jansen G , Schulenburg H |
| Ref : Genome Biol Evol , 6 :1287 , 2014 |
| Abstract : Laehnemann_2014_Genome.Biol.Evol_6_1287 |
| ESTHER : Laehnemann_2014_Genome.Biol.Evol_6_1287 |
| PubMedSearch : Laehnemann_2014_Genome.Biol.Evol_6_1287 |
| PubMedID: 24850796 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Escherichia coli isolate for studying colonization of the mouse intestine and its application to two-component signaling knockouts - Lasaro_2014_J.Bacteriol_196_1723 |
| Author(s) : Lasaro M , Liu Z , Bishar R , Kelly K , Chattopadhyay S , Paul S , Sokurenko E , Zhu J , Goulian M |
| Ref : Journal of Bacteriology , 196 :1723 , 2014 |
| Abstract : Lasaro_2014_J.Bacteriol_196_1723 |
| ESTHER : Lasaro_2014_J.Bacteriol_196_1723 |
| PubMedSearch : Lasaro_2014_J.Bacteriol_196_1723 |
| PubMedID: 24563035 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR |
| Title : Genome Sequence of Enterotoxigenic Escherichia coli Strain B2C - Madhavan_2014_Genome.Announc_2_e00247 |
| Author(s) : Madhavan TP , Steen JA , Hugenholtz P , Sakellaris H |
| Ref : Genome Announc , 2 :e00247 , 2014 |
| Abstract : Madhavan_2014_Genome.Announc_2_e00247 |
| ESTHER : Madhavan_2014_Genome.Announc_2_e00247 |
| PubMedSearch : Madhavan_2014_Genome.Announc_2_e00247 |
| PubMedID: 24723709 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR |
| Title : Comparative genomics of enterohemorrhagic Escherichia coli O145:H28 demonstrates a common evolutionary lineage with Escherichia coli O157:H7 - Cooper_2014_BMC.Genomics_15_17 |
| Author(s) : Cooper KK , Mandrell RE , Louie JW , Korlach J , Clark TA , Parker CT , Huynh S , Chain PS , Ahmed S , Carter MQ |
| Ref : BMC Genomics , 15 :17 , 2014 |
| Abstract : Cooper_2014_BMC.Genomics_15_17 |
| ESTHER : Cooper_2014_BMC.Genomics_15_17 |
| PubMedSearch : Cooper_2014_BMC.Genomics_15_17 |
| PubMedID: 24410921 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : Polyamine transporters and polyamines increase furfural tolerance during xylose fermentation with ethanologenic Escherichia coli strain LY180 - Geddes_2014_Appl.Environ.Microbiol_80_5955 |
| Author(s) : Geddes RD , Wang X , Yomano LP , Miller EN , Zheng H , Shanmugam KT , Ingram LO |
| Ref : Applied Environmental Microbiology , 80 :5955 , 2014 |
| Abstract : Geddes_2014_Appl.Environ.Microbiol_80_5955 |
| ESTHER : Geddes_2014_Appl.Environ.Microbiol_80_5955 |
| PubMedSearch : Geddes_2014_Appl.Environ.Microbiol_80_5955 |
| PubMedID: 25063650 |
| Gene_locus related to this paper: ecoli-fes , ecoli-yaim , ecoli-YfhR |
| Title : Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes - Trees_2014_Genome.Announc_2_e00718 |
| Author(s) : Trees E , Strockbine N , Changayil S , Ranganathan S , Zhao K , Weil R , Maccannell D , Sabol A , Schmidtke A , Martin H , Stripling D , Ribot EM , Gerner-Smidt P |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : Trees_2014_Genome.Announc_2_e00718 |
| ESTHER : Trees_2014_Genome.Announc_2_e00718 |
| PubMedSearch : Trees_2014_Genome.Announc_2_e00718 |
| PubMedID: 25103754 |
| Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-ybff , ecoli-yiel , ecoli-ypt1 , ecoli-Z1930 , ecoli-YfhR |
| Title : Draft Genome Sequences of Extended-Spectrum beta-Lactamase-Producing Escherichia coli Strains Isolated from Patients in Lebanon - Tokajian_2014_Genome.Announc_2_e00123 |
| Author(s) : Tokajian S , Eisen JA , Jospin G , Farra A , Coil DA |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : Tokajian_2014_Genome.Announc_2_e00123 |
| ESTHER : Tokajian_2014_Genome.Announc_2_e00123 |
| PubMedSearch : Tokajian_2014_Genome.Announc_2_e00123 |
| PubMedID: 24558252 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Genome Sequences of Avian Pathogenic Escherichia coli Strains Isolated from Brazilian Commercial Poultry - Rojas_2013_Genome.Announc_1_e0011013 |
| Author(s) : Rojas TC , Maluta RP , Parizzi LP , Koenigkan LV , Yang J , Yu J , Pereira GA , Dias da Silveira W |
| Ref : Genome Announc , 1 :e0011013 , 2013 |
| Abstract : Rojas_2013_Genome.Announc_1_e0011013 |
| ESTHER : Rojas_2013_Genome.Announc_1_e0011013 |
| PubMedSearch : Rojas_2013_Genome.Announc_1_e0011013 |
| PubMedID: 23516222 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-IROD , ecoli-IROE , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR |
| Title : Genome Sequences of Two Emerging Non-O157 Shiga Toxin-Producing Escherichia coli Strains - Cao_2013_Genome.Announc_1_E00200 |
| Author(s) : Cao G , Ju W , Rump L , Zhao S , Zou L , Wang C , Strain E , Luo Y , Timme R , Allard M , Brown E , Meng J |
| Ref : Genome Announc , 1 :E00200 , 2013 |
| Abstract : Cao_2013_Genome.Announc_1_E00200 |
| ESTHER : Cao_2013_Genome.Announc_1_E00200 |
| PubMedSearch : Cao_2013_Genome.Announc_1_E00200 |
| PubMedID: 23682138 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR |
| Title : Draft Genome Sequences of Two O104:H21 Escherichia coli Isolates Causing Hemorrhagic Colitis during a 1994 Montana Outbreak Provide Insight into Their Pathogenicity - Gonzalez-Escalona_2013_Genome.Announc_1_e00805 |
| Author(s) : Gonzalez-Escalona N , McFarland MA , Rump LV , Payne J , Andrzejewski D , Brown EW , Evans PS , Croley TR |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Gonzalez-Escalona_2013_Genome.Announc_1_e00805 |
| ESTHER : Gonzalez-Escalona_2013_Genome.Announc_1_e00805 |
| PubMedSearch : Gonzalez-Escalona_2013_Genome.Announc_1_e00805 |
| PubMedID: 24092795 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecolx-e1iyu3 |
| Title : Complete Genome Sequence of the Epidemic and Highly Virulent CTX-M-15-Producing H30-Rx Subclone of Escherichia coli ST131 - Andersen_2013_Genome.Announc_1_e00988 |
| Author(s) : Andersen PS , Stegger M , Aziz M , Contente-Cuomo T , Gibbons HS , Keim P , Sokurenko EV , Johnson JR , Price LB |
| Ref : Genome Announc , 1 :e00988 , 2013 |
| Abstract : Andersen_2013_Genome.Announc_1_e00988 |
| ESTHER : Andersen_2013_Genome.Announc_1_e00988 |
| PubMedSearch : Andersen_2013_Genome.Announc_1_e00988 |
| PubMedID: 24309736 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Complete genome sequence of the avian pathogenic Escherichia coli strain APEC O78 - Mangiamele_2013_Genome.Announc_1_e0002613 |
| Author(s) : Mangiamele P , Nicholson B , Wannemuehler Y , Seemann T , Logue CM , Li G , Tivendale KA , Nolan LK |
| Ref : Genome Announc , 1 :e0002613 , 2013 |
| Abstract : Mangiamele_2013_Genome.Announc_1_e0002613 |
| ESTHER : Mangiamele_2013_Genome.Announc_1_e0002613 |
| PubMedSearch : Mangiamele_2013_Genome.Announc_1_e0002613 |
| PubMedID: 23516182 |
| Gene_locus related to this paper: ecoli-ycfp , ecoli-yqia , ecoli-YfhR |
| Title : Adaptive evolution of Escherichia coli to an alpha-peptide\/beta-peptoid peptidomimetic induces stable resistance - Hein-Kristensen_2013_PLoS.One_8_e73620 |
| Author(s) : Hein-Kristensen L , Franzyk H , Holch A , Gram L |
| Ref : PLoS ONE , 8 :e73620 , 2013 |
| Abstract : Hein-Kristensen_2013_PLoS.One_8_e73620 |
| ESTHER : Hein-Kristensen_2013_PLoS.One_8_e73620 |
| PubMedSearch : Hein-Kristensen_2013_PLoS.One_8_e73620 |
| PubMedID: 24040003 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Genomically recoded organisms expand biological functions - Lajoie_2013_Science_342_357 |
| Author(s) : Lajoie MJ , Rovner AJ , Goodman DB , Aerni HR , Haimovich AD , Kuznetsov G , Mercer JA , Wang HH , Carr PA , Mosberg JA , Rohland N , Schultz PG , Jacobson JM , Rinehart J , Church GM , Isaacs FJ |
| Ref : Science , 342 :357 , 2013 |
| Abstract : Lajoie_2013_Science_342_357 |
| ESTHER : Lajoie_2013_Science_342_357 |
| PubMedSearch : Lajoie_2013_Science_342_357 |
| PubMedID: 24136966 |
| Gene_locus related to this paper: ecoli-YfhR |
| Title : Optical mapping and sequencing of the Escherichia coli KO11 genome reveal extensive chromosomal rearrangements, and multiple tandem copies of the Zymomonas mobilis pdc and adhB genes - Turner_2012_J.Ind.Microbiol.Biotechnol_39_629 |
| Author(s) : Turner PC , Yomano LP , Jarboe LR , York SW , Baggett CL , Moritz BE , Zentz EB , Shanmugam KT , Ingram LO |
| Ref : J Ind Microbiol Biotechnol , 39 :629 , 2012 |
| Abstract : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629 |
| ESTHER : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629 |
| PubMedSearch : Turner_2012_J.Ind.Microbiol.Biotechnol_39_629 |
| PubMedID: 22075923 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Draft genome sequences of the diarrheagenic Escherichia coli collection - Hazen_2012_J.Bacteriol_194_3026 |
| Author(s) : Hazen TH , Sahl JW , Redman JC , Morris CR , Daugherty SC , Chibucos MC , Sengamalay NA , Fraser-Liggett CM , Steinsland H , Whittam TS , Whittam B , Manning SD , Rasko DA |
| Ref : Journal of Bacteriology , 194 :3026 , 2012 |
| Abstract : Hazen_2012_J.Bacteriol_194_3026 |
| ESTHER : Hazen_2012_J.Bacteriol_194_3026 |
| PubMedSearch : Hazen_2012_J.Bacteriol_194_3026 |
| PubMedID: 22582382 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing - Ju_2012_J.Clin.Microbiol_50_4123 |
| Author(s) : Ju W , Cao G , Rump L , Strain E , Luo Y , Timme R , Allard M , Zhao S , Brown E , Meng J |
| Ref : J Clin Microbiol , 50 :4123 , 2012 |
| Abstract : Ju_2012_J.Clin.Microbiol_50_4123 |
| ESTHER : Ju_2012_J.Clin.Microbiol_50_4123 |
| PubMedSearch : Ju_2012_J.Clin.Microbiol_50_4123 |
| PubMedID: 23052305 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : A novel non-homologous recombination-mediated mechanism for Escherichia coli unilateral flagellar phase variation - Liu_2012_Nucleic.Acids.Res_40_4530 |
| Author(s) : Liu B , Hu B , Zhou Z , Guo D , Guo X , Ding P , Feng L , Wang L |
| Ref : Nucleic Acids Research , 40 :4530 , 2012 |
| Abstract : Liu_2012_Nucleic.Acids.Res_40_4530 |
| ESTHER : Liu_2012_Nucleic.Acids.Res_40_4530 |
| PubMedSearch : Liu_2012_Nucleic.Acids.Res_40_4530 |
| PubMedID: 22287625 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-yqia , ecoli-YfhR |
| Title : Genome analysis of bovine-mastitis-associated Escherichia coli O32:H37 strain P4 - Blum_2012_J.Bacteriol_194_3732 |
| Author(s) : Blum S , Sela N , Heller ED , Sela S , Leitner G |
| Ref : Journal of Bacteriology , 194 :3732 , 2012 |
| Abstract : Blum_2012_J.Bacteriol_194_3732 |
| ESTHER : Blum_2012_J.Bacteriol_194_3732 |
| PubMedSearch : Blum_2012_J.Bacteriol_194_3732 |
| PubMedID: 22740662 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-yqia , ecoli-yuar , ecoli-Z1930 , ecoli-YfhR |
| Title : Genome sequences and phylogenetic analysis of K88- and F18-positive porcine enterotoxigenic Escherichia coli - Shepard_2012_J.Bacteriol_194_395 |
| Author(s) : Shepard SM , Danzeisen JL , Isaacson RE , Seemann T , Achtman M , Johnson TJ |
| Ref : Journal of Bacteriology , 194 :395 , 2012 |
| Abstract : Shepard_2012_J.Bacteriol_194_395 |
| ESTHER : Shepard_2012_J.Bacteriol_194_395 |
| PubMedSearch : Shepard_2012_J.Bacteriol_194_395 |
| PubMedID: 22081385 |
| Gene_locus related to this paper: ecoli-fes , ecoli-estX , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yqia , ecoli-YfhR |
| Title : Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011 - Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| Author(s) : Grad YH , Lipsitch M , Feldgarden M , Arachchi HM , Cerqueira GC , FitzGerald M , Godfrey P , Haas BJ , Murphy CI , Russ C , Sykes S , Walker BJ , Wortman JR , Young S , Zeng Q , Abouelleil A , Bochicchio J , Chauvin S , Desmet T , Gujja S , McCowan C , Montmayeur A , Steelman S , Frimodt-Moller J , Petersen AM , Struve C , Krogfelt KA , Bingen E , Weill FX , Lander ES , Nusbaum C , Birren BW , Hung DT , Hanage WP |
| Ref : Proc Natl Acad Sci U S A , 109 :3065 , 2012 |
| Abstract : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| ESTHER : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| PubMedSearch : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| PubMedID: 22315421 |
| Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : Draft genome of a Brazilian avian-pathogenic Escherichia coli strain and in silico characterization of virulence-related genes - Rojas_2012_J.Bacteriol_194_3023 |
| Author(s) : Rojas TC , Parizzi LP , Tiba MR , Chen L , Pereira GA , Sangal V , Yang J , Yu J , Dias da Silveira W |
| Ref : Journal of Bacteriology , 194 :3023 , 2012 |
| Abstract : Rojas_2012_J.Bacteriol_194_3023 |
| ESTHER : Rojas_2012_J.Bacteriol_194_3023 |
| PubMedSearch : Rojas_2012_J.Bacteriol_194_3023 |
| PubMedID: 22582380 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-IROE , ecoli-ycfp , ecoli-YFBB , ecoli-ypt1 , ecoli-YfhR |
| Title : Draft Genome sequence of Escherichia coli AI27, a porcine isolate belonging to phylogenetic group B1 - Lee_2012_J.Bacteriol_194_6640 |
| Author(s) : Lee K , Yi H , Cho YJ , Jang J , Hur HG , Chun J |
| Ref : Journal of Bacteriology , 194 :6640 , 2012 |
| Abstract : Lee_2012_J.Bacteriol_194_6640 |
| ESTHER : Lee_2012_J.Bacteriol_194_6640 |
| PubMedSearch : Lee_2012_J.Bacteriol_194_6640 |
| PubMedID: 23144394 |
| Gene_locus related to this paper: ecoli-IROD , ecoli-yaim , ecoli-ycfp , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR |
| Title : Complete genome sequence of adherent invasive Escherichia coli UM146 isolated from Ileal Crohn's disease biopsy tissue - Krause_2011_J.Bacteriol_193_583 |
| Author(s) : Krause DO , Little AC , Dowd SE , Bernstein CN |
| Ref : Journal of Bacteriology , 193 :583 , 2011 |
| Abstract : Krause_2011_J.Bacteriol_193_583 |
| ESTHER : Krause_2011_J.Bacteriol_193_583 |
| PubMedSearch : Krause_2011_J.Bacteriol_193_583 |
| PubMedID: 21075930 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-entf , ecoli-IROD , ecoli-IROE , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yeiG , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecout-q1r7l6 |
| Title : Genome of multidrug-resistant uropathogenic Escherichia coli strain NA114 from India - Avasthi_2011_J.Bacteriol_193_4272 |
| Author(s) : Avasthi TS , Kumar N , Baddam R , Hussain A , Nandanwar N , Jadhav S , Ahmed N |
| Ref : Journal of Bacteriology , 193 :4272 , 2011 |
| Abstract : Avasthi_2011_J.Bacteriol_193_4272 |
| ESTHER : Avasthi_2011_J.Bacteriol_193_4272 |
| PubMedSearch : Avasthi_2011_J.Bacteriol_193_4272 |
| PubMedID: 21685291 |
| Gene_locus related to this paper: ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yiel , ecoli-yqia , ecoli-YfhR , ecolx-f4suw9 , ecolx-g0dan0 |
| Title : Genome sequence of Escherichia coli XH140A, which produces L-threonine - Yang_2011_J.Bacteriol_193_6090 |
| Author(s) : Yang H , Liao Y , Wang B , Lin Y , Pan L |
| Ref : Journal of Bacteriology , 193 :6090 , 2011 |
| Abstract : Yang_2011_J.Bacteriol_193_6090 |
| ESTHER : Yang_2011_J.Bacteriol_193_6090 |
| PubMedSearch : Yang_2011_J.Bacteriol_193_6090 |
| PubMedID: 21994923 |
| Gene_locus related to this paper: ecoli-ybff , ecoli-ycfp , ecoli-yqia , ecoli-YfhR |
| Title : Complete genome sequence of the neonatal-meningitis-associated Escherichia coli strain CE10 - Lu_2011_J.Bacteriol_193_7005 |
| Author(s) : Lu S , Zhang X , Zhu Y , Kim KS , Yang J , Jin Q |
| Ref : Journal of Bacteriology , 193 :7005 , 2011 |
| Abstract : Lu_2011_J.Bacteriol_193_7005 |
| ESTHER : Lu_2011_J.Bacteriol_193_7005 |
| PubMedSearch : Lu_2011_J.Bacteriol_193_7005 |
| PubMedID: 22123760 |
| Gene_locus related to this paper: ecoli-ybff , ecoli-YFBB , ecoli-yqia , ecoli-YfhR |
| Title : Genome sequence of Escherichia coli AA86, isolated from cow feces - Yi_2011_J.Bacteriol_193_3681 |
| Author(s) : Yi H , Cho YJ , Hur HG , Chun J |
| Ref : Journal of Bacteriology , 193 :3681 , 2011 |
| Abstract : Yi_2011_J.Bacteriol_193_3681 |
| ESTHER : Yi_2011_J.Bacteriol_193_3681 |
| PubMedSearch : Yi_2011_J.Bacteriol_193_3681 |
| PubMedID: 21602332 |
| Gene_locus related to this paper: ecoli-ycfp , ecoli-YfhR , ecolx-f4suw9 |
| Title : Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology - Mellmann_2011_PLoS.One_6_e22751 |
| Author(s) : Mellmann A , Harmsen D , Cummings CA , Zentz EB , Leopold SR , Rico A , Prior K , Szczepanowski R , Ji Y , Zhang W , McLaughlin SF , Henkhaus JK , Leopold B , Bielaszewska M , Prager R , Brzoska PM , Moore RL , Guenther S , Rothberg JM , Karch H |
| Ref : PLoS ONE , 6 :e22751 , 2011 |
| Abstract : Mellmann_2011_PLoS.One_6_e22751 |
| ESTHER : Mellmann_2011_PLoS.One_6_e22751 |
| PubMedSearch : Mellmann_2011_PLoS.One_6_e22751 |
| PubMedID: 21799941 |
| Gene_locus related to this paper: ecoli-ycfp , ecoli-YFBB , ecoli-yqia , ecoli-YfhR |
| Title : Host imprints on bacterial genomes--rapid, divergent evolution in individual patients - Zdziarski_2010_PLoS.Pathog_6_e1001078 |
| Author(s) : Zdziarski J , Brzuszkiewicz E , Wullt B , Liesegang H , Biran D , Voigt B , Gronberg-Hernandez J , Ragnarsdottir B , Hecker M , Ron EZ , Daniel R , Gottschalk G , Hacker J , Svanborg C , Dobrindt U |
| Ref : PLoS Pathog , 6 :e1001078 , 2010 |
| Abstract : Zdziarski_2010_PLoS.Pathog_6_e1001078 |
| ESTHER : Zdziarski_2010_PLoS.Pathog_6_e1001078 |
| PubMedSearch : Zdziarski_2010_PLoS.Pathog_6_e1001078 |
| PubMedID: 20865122 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-yafa , ecoli-ybff , ecoli-ycfp , ecoli-YFBB , ecoli-yqia , ecoli-YfhR |
| Title : Derivation of Escherichia coli O157:H7 from its O55:H7 precursor - Zhou_2010_PLoS.One_5_e8700 |
| Author(s) : Zhou Z , Li X , Liu B , Beutin L , Xu J , Ren Y , Feng L , Lan R , Reeves PR , Wang L |
| Ref : PLoS ONE , 5 :e8700 , 2010 |
| Abstract : Zhou_2010_PLoS.One_5_e8700 |
| ESTHER : Zhou_2010_PLoS.One_5_e8700 |
| PubMedSearch : Zhou_2010_PLoS.One_5_e8700 |
| PubMedID: 20090843 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2 - Toh_2010_J.Bacteriol_192_1165 |
| Author(s) : Toh H , Oshima K , Toyoda A , Ogura Y , Ooka T , Sasamoto H , Park SH , Iyoda S , Kurokawa K , Morita H , Itoh K , Taylor TD , Hayashi T , Hattori M |
| Ref : Journal of Bacteriology , 192 :1165 , 2010 |
| Abstract : Toh_2010_J.Bacteriol_192_1165 |
| ESTHER : Toh_2010_J.Bacteriol_192_1165 |
| PubMedSearch : Toh_2010_J.Bacteriol_192_1165 |
| PubMedID: 20008064 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecos5-d2nhh3 , yerpe-YBTT , ecolx-f4suw9 |
| Title : Genome sequences of Escherichia coli B strains REL606 and BL21(DE3) - Jeong_2009_J.Mol.Biol_394_644 |
| Author(s) : Jeong H , Barbe V , Lee CH , Vallenet D , Yu DS , Choi SH , Couloux A , Lee SW , Yoon SH , Cattolico L , Hur CG , Park HS , Segurens B , Kim SC , Oh TK , Lenski RE , Studier FW , Daegelen P , Kim JF |
| Ref : Journal of Molecular Biology , 394 :644 , 2009 |
| Abstract : Jeong_2009_J.Mol.Biol_394_644 |
| ESTHER : Jeong_2009_J.Mol.Biol_394_644 |
| PubMedSearch : Jeong_2009_J.Mol.Biol_394_644 |
| PubMedID: 19786035 |
| Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |
| Title : A precise reconstruction of the emergence and constrained radiations of Escherichia coli O157 portrayed by backbone concatenomic analysis - Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713 |
| Author(s) : Leopold SR , Magrini V , Holt NJ , Shaikh N , Mardis ER , Cagno J , Ogura Y , Iguchi A , Hayashi T , Mellmann A , Karch H , Besser TE , Sawyer SA , Whittam TS , Tarr PI |
| Ref : Proc Natl Acad Sci U S A , 106 :8713 , 2009 |
| Abstract : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713 |
| ESTHER : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713 |
| PubMedSearch : Leopold_2009_Proc.Natl.Acad.Sci.U.S.A_106_8713 |
| PubMedID: 19439656 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , neucr-q7sha3 |
| Title : Complete genome sequence and comparative genome analysis of enteropathogenic Escherichia coli O127:H6 strain E2348\/69 - Iguchi_2009_J.Bacteriol_191_347 |
| Author(s) : Iguchi A , Thomson NR , Ogura Y , Saunders D , Ooka T , Henderson IR , Harris D , Asadulghani M , Kurokawa K , Dean P , Kenny B , Quail MA , Thurston S , Dougan G , Hayashi T , Parkhill J , Frankel G |
| Ref : Journal of Bacteriology , 191 :347 , 2009 |
| Abstract : Iguchi_2009_J.Bacteriol_191_347 |
| ESTHER : Iguchi_2009_J.Bacteriol_191_347 |
| PubMedSearch : Iguchi_2009_J.Bacteriol_191_347 |
| PubMedID: 18952797 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR |
| Title : Genomic sequencing reveals regulatory mutations and recombinational events in the widely used MC4100 lineage of Escherichia coli K-12 - Ferenci_2009_J.Bacteriol_191_4025 |
| Author(s) : Ferenci T , Zhou Z , Betteridge T , Ren Y , Liu Y , Feng L , Reeves PR , Wang L |
| Ref : Journal of Bacteriology , 191 :4025 , 2009 |
| Abstract : Ferenci_2009_J.Bacteriol_191_4025 |
| ESTHER : Ferenci_2009_J.Bacteriol_191_4025 |
| PubMedSearch : Ferenci_2009_J.Bacteriol_191_4025 |
| PubMedID: 19376874 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |
| Title : The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse - Durfee_2008_J.Bacteriol_190_2597 |
| Author(s) : Durfee T , Nelson R , Baldwin S , Plunkett G, 3rd , Burland V , Mau B , Petrosino JF , Qin X , Muzny DM , Ayele M , Gibbs RA , Csorgo B , Posfai G , Weinstock GM , Blattner FR |
| Ref : Journal of Bacteriology , 190 :2597 , 2008 |
| Abstract : Durfee_2008_J.Bacteriol_190_2597 |
| ESTHER : Durfee_2008_J.Bacteriol_190_2597 |
| PubMedSearch : Durfee_2008_J.Bacteriol_190_2597 |
| PubMedID: 18245285 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |
| Title : Complete genome sequence and comparative analysis of the wild-type commensal Escherichia coli strain SE11 isolated from a healthy adult - Oshima_2008_DNA.Res_15_375 |
| Author(s) : Oshima K , Toh H , Ogura Y , Sasamoto H , Morita H , Park SH , Ooka T , Iyoda S , Taylor TD , Hayashi T , Itoh K , Hattori M |
| Ref : DNA Research , 15 :375 , 2008 |
| Abstract : Oshima_2008_DNA.Res_15_375 |
| ESTHER : Oshima_2008_DNA.Res_15_375 |
| PubMedSearch : Oshima_2008_DNA.Res_15_375 |
| PubMedID: 18931093 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : Insights into the environmental resistance gene pool from the genome sequence of the multidrug-resistant environmental isolate Escherichia coli SMS-3-5 - Fricke_2008_J.Bacteriol_190_6779 |
| Author(s) : Fricke WF , Wright MS , Lindell AH , Harkins DM , Baker-Austin C , Ravel J , Stepanauskas R |
| Ref : Journal of Bacteriology , 190 :6779 , 2008 |
| Abstract : Fricke_2008_J.Bacteriol_190_6779 |
| ESTHER : Fricke_2008_J.Bacteriol_190_6779 |
| PubMedSearch : Fricke_2008_J.Bacteriol_190_6779 |
| PubMedID: 18708504 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-estX , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecosm-b1lhu2 |
| Title : The pangenome structure of Escherichia coli: comparative genomic analysis of E. coli commensal and pathogenic isolates - Rasko_2008_J.Bacteriol_190_6881 |
| Author(s) : Rasko DA , Rosovitz MJ , Myers GS , Mongodin EF , Fricke WF , Gajer P , Crabtree J , Sebaihia M , Thomson NR , Chaudhuri R , Henderson IR , Sperandio V , Ravel J |
| Ref : Journal of Bacteriology , 190 :6881 , 2008 |
| Abstract : Rasko_2008_J.Bacteriol_190_6881 |
| ESTHER : Rasko_2008_J.Bacteriol_190_6881 |
| PubMedSearch : Rasko_2008_J.Bacteriol_190_6881 |
| PubMedID: 18676672 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-Z2445 , ecoli-YfhR |
| Title : The genome sequence of avian pathogenic Escherichia coli strain O1:K1:H7 shares strong similarities with human extraintestinal pathogenic E. coli genomes - Johnson_2007_J.Bacteriol_189_3228 |
| Author(s) : Johnson TJ , Kariyawasam S , Wannemuehler Y , Mangiamele P , Johnson SJ , Doetkott C , Skyberg JA , Lynne AM , Johnson JR , Nolan LK |
| Ref : Journal of Bacteriology , 189 :3228 , 2007 |
| Abstract : Johnson_2007_J.Bacteriol_189_3228 |
| ESTHER : Johnson_2007_J.Bacteriol_189_3228 |
| PubMedSearch : Johnson_2007_J.Bacteriol_189_3228 |
| PubMedID: 17293413 |
| Gene_locus related to this paper: ecok1-a1acc0 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR , ecout-q1r7l6 , yerpe-YBTT |
| Title : Role of pathogenicity island-associated integrases in the genome plasticity of uropathogenic Escherichia coli strain 536 - Hochhut_2006_Mol.Microbiol_61_584 |
| Author(s) : Hochhut B , Wilde C , Balling G , Middendorf B , Dobrindt U , Brzuszkiewicz E , Gottschalk G , Carniel E , Hacker J |
| Ref : Molecular Microbiology , 61 :584 , 2006 |
| Abstract : Hochhut_2006_Mol.Microbiol_61_584 |
| ESTHER : Hochhut_2006_Mol.Microbiol_61_584 |
| PubMedSearch : Hochhut_2006_Mol.Microbiol_61_584 |
| PubMedID: 16879640 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C2451 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-IROD , ecoli-IROE , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR , ecolx-q707d7 , yerpe-YBTT |
| Title : Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T - Wei_2003_Infect.Immun_71_2775 |
| Author(s) : Wei J , Goldberg MB , Burland V , Venkatesan MM , Deng W , Fournier G , Mayhew GF , Plunkett G, 3rd , Rose DJ , Darling A , Mau B , Perna NT , Payne SM , Runyen-Janecky LJ , Zhou S , Schwartz DC , Blattner FR |
| Ref : Infect Immun , 71 :2775 , 2003 |
| Abstract : Wei_2003_Infect.Immun_71_2775 |
| ESTHER : Wei_2003_Infect.Immun_71_2775 |
| PubMedSearch : Wei_2003_Infect.Immun_71_2775 |
| PubMedID: 12704152 |
| Gene_locus related to this paper: ecoli-yafa , ecoli-ycfp , ecoli-yqia , ecoli-YfhR , shifl-BIOH , shifl-FES , shifl-PLDB , shifl-PTRB , shifl-SF1808 , shifl-SF3046 , shifl-yafa , shifl-YBFF , shifl-YCDJ , shifl-YFBB , shifl-YHET , shifl-YIEL , shifl-YJFP , shifl-YPFH |
| Title : Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12 - Hayashi_2001_DNA.Res_8_11 |
| Author(s) : Hayashi T , Makino K , Ohnishi M , Kurokawa K , Ishii K , Yokoyama K , Han CG , Ohtsubo E , Nakayama K , Murata T , Tanaka M , Tobe T , Iida T , Takami H , Honda T , Sasakawa C , Ogasawara N , Yasunaga T , Kuhara S , Shiba T , Hattori M , Shinagawa H |
| Ref : DNA Research , 8 :11 , 2001 |
| Abstract : Hayashi_2001_DNA.Res_8_11 |
| ESTHER : Hayashi_2001_DNA.Res_8_11 |
| PubMedSearch : Hayashi_2001_DNA.Res_8_11 |
| PubMedID: 11258796 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-entf , ecoli-fes , ecoli-MCMK , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-Z0347 , ecoli-Z1341 , ecoli-Z1930 , ecoli-Z2445 , ecoli-YfhR |
| Title : Construction of a contiguous 874-kb sequence of the Escherichia coli -K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features - Yamamoto_1997_DNA.Res_4_91 |
| Author(s) : Yamamoto Y , Aiba H , Baba T , Hayashi K , Inada T , Isono K , Itoh T , Kimura S , Kitagawa M , Makino K , Miki T , Mitsuhashi N , Mizobuchi K , Mori H , Nakade S , Nakamura Y , Nashimoto H , Oshima T , Oyama S , Saito N , Sampei G , Satoh Y , Sivasundaram S , Tagami H , Horiuchi T , et al. |
| Ref : DNA Research , 4 :91 , 1997 |
| Abstract : Yamamoto_1997_DNA.Res_4_91 |
| ESTHER : Yamamoto_1997_DNA.Res_4_91 |
| PubMedSearch : Yamamoto_1997_DNA.Res_4_91 |
| PubMedID: 9205837 |
| Gene_locus related to this paper: ecoli-YFBB , ecoli-YfhR |
| Title : The complete genome sequence of Escherichia coli K-12 - Blattner_1997_Science_277_1453 |
| Author(s) : Blattner FR , Plunkett G, 3rd , Bloch CA , Perna NT , Burland V , Riley M , Collado-Vides J , Glasner JD , Rode CK , Mayhew GF , Gregor J , Davis NW , Kirkpatrick HA , Goeden MA , Rose DJ , Mau B , Shao Y |
| Ref : Science , 277 :1453 , 1997 |
| Abstract : Blattner_1997_Science_277_1453 |
| ESTHER : Blattner_1997_Science_277_1453 |
| PubMedSearch : Blattner_1997_Science_277_1453 |
| PubMedID: 9278503 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR |