Gene_Locus Report

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Gene_locus Report for: cofca-a0a068tuv6

Coffea canephora (Robusta coffee). Coffea canephora DH200=94 genomic scaffold, scaffold_3

Comment
only c-term Chlorophyllase 367->


Relationship
Family|Chlorophyllase_Plant
Block| L
Position in NCBI Life Tree|Coffea canephora
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > asterids: N E > lamiids: N E > Gentianales: N E > Rubiaceae: N E > Ixoroideae: N E > Gardenieae complex: N E > Bertiereae - Coffeeae clade: N E > Coffeeae: N E > Coffea: N E > Coffea canephora: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : HG739087
1 UniProt : A0A068TUV6
1 UniProt : A0A068TUV6
1 Interpro : A0A068TUV6
1 Pfam : A0A068TUV6
1 PIRSF : A0A068TUV6
1 SUPERFAM : A0A068TUV6
Sequence
Graphical view for this peptide sequence: cofca-a0a068tuv6
Colored MSA for Chlorophyllase_Plant (raw)
SSAVASSISRNVFGVGKYISKLLKVEQQTSIGNALLGIARPPKPLLIGIP
SEAGVFPVLLFIHGYLLYNSFYSQLVQHIASHGFIVIAPQLYSMAGPDTT
EEINATAEIANWLSEGLQKLLPPKVQANLSKLALAGHSRGGKVAFGVALG
KAVTSLKFSALIGIDPVDGVEKGKQMPPILTYNPHSFNLDMAVSIIGSGL
GELRSNFLFPPSAPKGVNHKDFYNECQKPACYFVARDYGHLDMLDDDTSG
LRGKATYCLCKNGESRDPMRRFVGGIMVAFMRNYLEGNSRDLQAIRHGHL
TAPVELQNVDFLV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

SSAVASSISRNVFGVGKYISKLLKVEQQTSIGNALLGIARPPKPLLIGIP
SEAGVFPVLLFIHGYLLYNSFYSQLVQHIASHGFIVIAPQLYSMAGPDTT
EEINATAEIANWLSEGLQKLLPPKVQANLSKLALAGHSRGGKVAFGVALG
KAVTSLKFSALIGIDPVDGVEKGKQMPPILTYNPHSFNLDMAVSIIGSGL
GELRSNFLFPPSAPKGVNHKDFYNECQKPACYFVARDYGHLDMLDDDTSG
LRGKATYCLCKNGESRDPMRRFVGGIMVAFMRNYLEGNSRDLQAIRHGHL
TAPVELQNVDFLV



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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