Gene_Locus Report

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Gene_locus Report for: byssn-v5f883

Byssochlamys spectabilis (strain No. 5 / NBRC 109023) (Paecilomyces variotii). Histone deacetylase hda1 Arb2 domain

Relationship
Family|Arb2_domain
Block| X
Position in NCBI Life Tree|Byssochlamys spectabilis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Fungi: N E > Dikarya: N E > Ascomycota: N E > saccharomyceta: N E > Pezizomycotina: N E > leotiomyceta: N E > Eurotiomycetes: N E > Eurotiomycetidae: N E > Eurotiales: N E > Thermoascaceae: N E > Byssochlamys: N E > Byssochlamys spectabilis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BAUL01000017
1 UniProt : V5F883
2 UniProt : V5F883, A0A443HJD9
2 Interpro : V5F883, A0A443HJD9
2 Pfam : V5F883, A0A443HJD9
2 PIRSF : V5F883, A0A443HJD9
2 SUPERFAM : V5F883, A0A443HJD9
Sequence
Graphical view for this peptide sequence: byssn-v5f883
Colored MSA for Arb2_domain (raw)
RVHDVIRAYQSKHLYDNYKLTSLYIYRTAISKSFENQVLATSNYDQAVPL
IVIFHDPPEIMGIPNPSSNKLEPHNCWLADVVKDYIEWAVQRNYAVIDVN
IPKYVTSDSSPGKYEDEDENRPTATEELASYLWDNYIEPNEATETFFLGV
GDAFYGVANLLINRDSIYQRVNSVISFVAENPVRAIASHTQVWLSRWYKE
NSLVYVSHTHGVWNNLGRKPSKRYGRLIRSQKAGLSEMLEFHKDDVFKWI
DSRTSLEESDESEKDEGSRSPTKEK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

RVHDVIRAYQSKHLYDNYKLTSLYIYRTAISKSFENQVLATSNYDQAVPL
IVIFHDPPEIMGIPNPSSNKLEPHNCWLADVVKDYIEWAVQRNYAVIDVN
IPKYVTSDSSPGKYEDEDENRPTATEELASYLWDNYIEPNEATETFFLGV
GDAFYGVANLLINRDSIYQRVNSVISFVAENPVRAIASHTQVWLSRWYKE
NSLVYVSHTHGVWNNLGRKPSKRYGRLIRSQKAGLSEMLEFHKDDVFKWI
DSRTSLEESDESEKDEGSRSPTKEK


Reference
    Title: Draft Genome Sequence of the Formaldehyde-Resistant Fungus Byssochlamys spectabilis No. 5 (Anamorph Paecilomyces variotii No. 5) (NBRC109023)
    Oka T, Ekino K, Fukuda K, Nomura Y
    Ref: Genome Announc, 2:, 2014 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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