Gene_Locus Report

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Gene_locus Report for: ascsu-f1l6s4

Ascaris suum (Pig roundworm) (Ascaris lumbricoides) Gastric triacylglycerol lipase

Comment
only Pfam A Abhydro_lipase 95 159 Pfam A Abhydrolase_1 173 454


Relationship
Family|Acidic_Lipase
Block| X
Position in NCBI Life Tree|Ascaris suum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Chromadorea: N E > Ascaridida: N E > Ascaridoidea: N E > Ascarididae: N E > Ascaris: N E > Ascaris suum: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : JI172587
1 UniProt : F1L6S4
1 UniProt : F1L6S4
1 Interpro : F1L6S4
1 Pfam : F1L6S4
1 PIRSF : F1L6S4
1 SUPERFAM : F1L6S4
Sequence
Graphical view for this peptide sequence: ascsu-f1l6s4
Colored MSA for Acidic_Lipase (raw)
MSIIASLLVITTILSRFSDAISVDLPEATMTTSQIIRHHGYPAEIHHITT
EDGYILEMHRIPFSRQENGRQRDEQKPVVFLQHGFIGSSAVWVTNLVNQS
AGFLFADAGFDVWMGNARGNTYSVGHVKYSRSKKEYWAFTWDDISEYDLP
AMIDYALNVTNERQLYYVGYSEGTLTMFAKLASDQSFASKIRKFFALGPI
GTVAHIKGLIRSAAKSFMRPLTVLARFSAEFMANDSLFRKMSKATCSLSQ
IVEHCENLMFQMTGPATSQMNQTRMSVYLTHMPGGTSTANLVHWAQMVNS
RNVQKYDFGSKSANKRHYGSEKPPVFNLTLVNAPVYLYWSDADWLADKRD
VEEGLLAVIPKKYIVENNQLQNFNHFDFIWGIHAAEKIYIPIINTIKDDQ
EIIVLQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSIIASLLVITTILSRFSDAISVDLPEATMTTSQIIRHHGYPAEIHHITT
EDGYILEMHRIPFSRQENGRQRDEQKPVVFLQHGFIGSSAVWVTNLVNQS
AGFLFADAGFDVWMGNARGNTYSVGHVKYSRSKKEYWAFTWDDISEYDLP
AMIDYALNVTNERQLYYVGYSEGTLTMFAKLASDQSFASKIRKFFALGPI
GTVAHIKGLIRSAAKSFMRPLTVLARFSAEFMANDSLFRKMSKATCSLSQ
IVEHCENLMFQMTGPATSQMNQTRMSVYLTHMPGGTSTANLVHWAQMVNS
RNVQKYDFGSKSANKRHYGSEKPPVFNLTLVNAPVYLYWSDADWLADKRD
VEEGLLAVIPKKYIVENNQLQNFNHFDFIWGIHAAEKIYIPIINTIKDDQ
EIIVLQ


Reference
    Title: Deep small RNA sequencing from the nematode Ascaris reveals conservation, functional diversification, and novel developmental profiles
    Wang J, Czech B, Crunk A, Wallace A, Mitreva M, Hannon GJ, Davis RE
    Ref: Genome Res, 21:1462, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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