Gene_Locus Report
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Gene_locus Report for: arath-AT4G10030

Arabidopsis thaliana (Mouse-ear cress) hypothetical 42.1 kda protein At4g10030 T5L19.160

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AL049481, AL161516
1 UniProt : Q9T0G1
1 Interpro : Q9T0G1
1 Pfam : Q9T0G1
1 PIRSF : Q9T0G1
1 SUPERFAM : Q9T0G1
1 Tair database : At4g10030
Sequence
Peptide
Graphical view for this peptide sequence: arath-AT4G10030
Colored MSA for 6_AlphaBeta_hydrolase (raw) 
MSAVSCSTASSSGGCAFRFRSKTSIHSPNFIRIGTNSQSDRFCNHRLELV
HGTRKVKGASVRMALVEERQSTSKDVAEPPRVLAYDLVQGALVKWRWKDD
KSVPDTPTAVLLHGILGSGKNWGTFARRLAHEFPTWQFLLVDLRCHGDST
SLKKRGPHSVATTASDVLKLVGQLRLTPRVLVGHSFGGKVVLSMVEQAAK
PLPRPVRAWVLDATPGKVRAGGDGEDHPRELISFLRKLPKVVLSKREVLK
ALINEGFSNDVAQWVITNLRPTGPSASSFSWTFDLDGIAELYQSYEETNL
WNFVENLPRGVHVNFLKAERSLHRWALEDLQRIHAAEELASEEGGGVEMH
VLEDAGHWVHTDNPDGLFRILSSSFQVLRA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MSAVSCSTASSSGGCAFRFRSKTSIHSPNFIRIGTNSQSDRFCNHRLELV
HGTRKVKGASVRMALVEERQSTSKDVAEPPRVLAYDLVQGALVKWRWKDD
KSVPDTPTAVLLHGILGSGKNWGTFARRLAHEFPTWQFLLVDLRCHGDST
SLKKRGPHSVATTASDVLKLVGQLRLTPRVLVGHSFGGKVVLSMVEQAAK
PLPRPVRAWVLDATPGKVRAGGDGEDHPRELISFLRKLPKVVLSKREVLK
ALINEGFSNDVAQWVITNLRPTGPSASSFSWTFDLDGIAELYQSYEETNL
WNFVENLPRGVHVNFLKAERSLHRWALEDLQRIHAAEELASEEGGGVEMH
VLEDAGHWVHTDNPDGLFRILSSSFQVLRA

References
    Title: The Arabidopsis ABHD11 Mutant Accumulates Polar Lipids in Leaves as a Consequence of Absent Acylhydrolase Activity
    Vijayakumar A, Vijayaraj P, Vijayakumar AK, Rajasekharan R
    Ref: Plant Physiol, 170:180, 2016 : PubMed

            

    Title: Full-length messenger RNA sequences greatly improve genome annotation
    Haas BJ, Volfovsky N, Town CD, Troukhan M, Alexandrov N, Feldmann KA, Flavell RB, White O, Salzberg SL
    Ref: Genome Biol, 3:RESEARCH0029, 2002 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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