Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: anoga-ebiG8742

Anopheles gambiae str. PEST CRA_x54KRFTDC0W, ebiG8742 gene homologous to neuroligins ENSANGG00000006582 ensangp00000026776 (fragment)

Comment
same gene but sequence diff Q5TMQ8 Q7PZH6 Q5TMQ9 ENSANGG00000023767 small fragment ?


Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Anopheles gambiae
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Panarthropoda: N E > Arthropoda: N E > Mandibulata: N E > Pancrustacea: N E > Hexapoda: N E > Insecta: N E > Dicondylia: N E > Pterygota: N E > Neoptera: N E > Holometabola: N E > Diptera: N E > Nematocera: N E > Culicomorpha: N E > Culicoidea: N E > Culicidae: N E > Anophelinae: N E > Anopheles [genus]: N E > Cellia: N E > Pyretophorus: N E > gambiae species complex: N E > Anopheles gambiae: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AAAB01008986
1 UniProt : Q5TMQ8
1 Ncbi-nid : 19612305
1 Ncbi-pid : 21287978
1 UniProt : Q5TMQ8
1 Interpro : Q5TMQ8
1 Pfam : Q5TMQ8
1 PIRSF : Q5TMQ8
1 SUPERFAM : Q5TMQ8
Sequence
Graphical view for this peptide sequence: anoga-ebiG8742
Colored MSA for Neuroligin (raw)
GPRYSSRIVDTKSGAIRGVILELNSKHLEPVEVFKAVPYATPPIGSLRFE
PPKKLPPWKGTKLADTFGSVCPQSFPDISNRTAALLSMPKGRYQHLKRLQ
PLLANQSEDCLTLNIYVPGSGSRGLEAPYSIFFYIHGEAYDWGSGNPYDG
SVLASYGHVIVVTVNFRLGILGFLKTRASLSPGSGGNLGLMDIILALQWV
RDNIASFGGDPKRITIVGHDTGAALANLALISKAGKGLVQRAILLSGSAL
SPWALIPDPDAVRLEVSQQMACHLVPGRNGRKPTTDDITECLRDKPIEAL
MGVRLTSVRFMPSWGPLLRTYIRNAFTFHLNEIFSAVRNEYTDWDKPIQH
PINIRDSTMEALSDGHTVAPIIKVAYLHARRGAKTYMFHFGYQSKESEYP
QRLGSVRGEDLPYIFGLPLVQGGPVFPQNYSRQDMGVNEAVLNFVTNFCK
TGDPNEAGHQQAAPLHPDYGTAKERTRFRLITWETYETTTQQYLSICE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GPRYSSRIVDTKSGAIRGVILELNSKHLEPVEVFKAVPYATPPIGSLRFE
PPKKLPPWKGTKLADTFGSVCPQSFPDISNRTAALLSMPKGRYQHLKRLQ
PLLANQSEDCLTLNIYVPGSGSRGLEAPYSIFFYIHGEAYDWGSGNPYDG
SVLASYGHVIVVTVNFRLGILGFLKTRASLSPGSGGNLGLMDIILALQWV
RDNIASFGGDPKRITIVGHDTGAALANLALISKAGKGLVQRAILLSGSAL
SPWALIPDPDAVRLEVSQQMACHLVPGRNGRKPTTDDITECLRDKPIEAL
MGVRLTSVRFMPSWGPLLRTYIRNAFTFHLNEIFSAVRNEYTDWDKPIQH
PINIRDSTMEALSDGHTVAPIIKVAYLHARRGAKTYMFHFGYQSKESEYP
QRLGSVRGEDLPYIFGLPLVQGGPVFPQNYSRQDMGVNEAVLNFVTNFCK
TGDPNEAGHQQAAPLHPDYGTAKERTRFRLITWETYETTTQQYLSICE


Reference
    Title: The genome sequence of the malaria mosquito Anopheles gambiae
    Holt RA, Subramanian GM, Halpern A, Sutton GG, Charlab R, Nusskern DR, Wincker P, Clark AG, Ribeiro JM and Hoffman SL <113 more author(s)>
    Ref: Science, 298:129, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer