Gene_Locus Report

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Gene_locus Report for: 9vibr-f9ry64

Vibrio ichthyoenteri ATCC 700023. UPF0227 protein VII00023_17764

Relationship
Family|abh_upf00227
Block| X
Position in NCBI Life Tree|Vibrio ichthyoenteri ATCC 700023
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Vibrionales: N E > Vibrionaceae: N E > Vibrio: N E > Vibrio ichthyoenteri: N E > Vibrio ichthyoenteri ATCC 700023: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AFWF01000031
1 UniProt : F9RY64
1 UniProt : F9RY64
1 Interpro : F9RY64
1 Pfam : F9RY64
1 PIRSF : F9RY64
1 SUPERFAM : F9RY64
Sequence
Graphical view for this peptide sequence: 9vibr-f9ry64
Colored MSA for abh_upf00227 (raw)
MIIYLHGFDSTSPGNHEKVLQLQFIDDDVRFINYSTLHPKHDMQHLLKEV
HKVIEQSDDKNPIICGVGLGGFWSERIGFLCGIKQVVFNPNLHPERTMQG
RIDRPEEYEDIATKCVQEFRVKNSKRCLVILSREDEIHNNQVTAKELEGY
YDVIWDEKQAHKFSKISQHLQAMKAFKEG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MIIYLHGFDSTSPGNHEKVLQLQFIDDDVRFINYSTLHPKHDMQHLLKEV
HKVIEQSDDKNPIICGVGLGGFWSERIGFLCGIKQVVFNPNLHPERTMQG
RIDRPEEYEDIATKCVQEFRVKNSKRCLVILSREDEIHNNQVTAKELEGY
YDVIWDEKQAHKFSKISQHLQAMKAFKEG


Reference
    Title: Vibrio caribbeanicus sp. nov., isolated from the marine sponge Scleritoderma cyanea
    Hoffmann M, Monday SR, Allard MW, Strain EA, Whittaker P, Naum M, McCarthy PJ, Lopez JV, Fischer M, Brown EW
    Ref: Int J Syst Evol Microbiol, 62:1736, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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