Gene_Locus Report

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Gene_locus Report for: 9sphn-a0a0c5l1m6

Sphingomonas hengshuiensis. Type IV secretory pathway VirJ component-like protein

Relationship
Family|VirJ
Block| X
Position in NCBI Life Tree|Sphingomonas hengshuiensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingomonas: N E > Sphingomonas hengshuiensis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CP010836, WP_044336931
Sequence
Graphical view for this peptide sequence: 9sphn-a0a0c5l1m6
Colored MSA for VirJ (raw)
MPRSWRGRIAAAVLLVVALLLGLYAAAGFFDRDPIRLFAADRARSDVAAV
YFSGDMGLRFGMGRYVADGLAKSGVPVLGISSSTAFATHHSRAQTDAIVA
DAIRQTLQRTGAKRIVVLGQSFGADIVRVGLAHLPQDLRGKVAAAVLVVP
GQNAYFRADPSGLAYRGAPDATAAEAPLLGWLPLTCIRGATETDSLCPAL
TLPNVRRITLAGGHFLRSDHALLVQTILRSLGTTLSPMGSR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPRSWRGRIAAAVLLVVALLLGLYAAAGFFDRDPIRLFAADRARSDVAAV
YFSGDMGLRFGMGRYVADGLAKSGVPVLGISSSTAFATHHSRAQTDAIVA
DAIRQTLQRTGAKRIVVLGQSFGADIVRVGLAHLPQDLRGKVAAAVLVVP
GQNAYFRADPSGLAYRGAPDATAAEAPLLGWLPLTCIRGATETDSLCPAL
TLPNVRRITLAGGHFLRSDHALLVQTILRSLGTTLSPMGSR



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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