Gene_Locus Report

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Gene_locus Report for: 9saur-a0a402emd5

Paroedura picta. Hydrolase_4 domain-containing protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Paroedura picta
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Sauropsida: N E > Sauria: N E > Lepidosauria: N E > Squamata: N E > Bifurcata: N E > Gekkota: N E > Gekkonidae: N E > Gekkoninae: N E > Paroedura: N E > Paroedura picta: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BDOT01000024
Sequence
Graphical view for this peptide sequence: 9saur-a0a402emd5
Colored MSA for abh_upf0017 (raw)
MVLGLLAWWLGRRILSSQGWSRWILEEEVQEPGLRGKGTKWALVGDCRLI
FTPSALALALLKHLGKSAYLEAQRWSWRTWPTLQTAKQLLWPPDQLLEMA
RDHLQVADGGLVALDWVVGPGGGSRKGSVAAGATVLLVVPNAAGKITRNL
CQLCRLALDKGHYPVIFNRRGHNGCPLTSVRLQPFGDPTDLKEAVTYIRF
RHPTAVLFAASEGSGSGLLLSYLGECGSSCDVQGAVCVSPLLKGQDWFEA
GSPWLWEWSLLLYQKTVISRHAKALREVVDMEKVLGSHSLREFEDTLFCC
GKSRPVTWETYWACNEPLRDADDVAVPVLCICSADDPVRGPPSRSLPWEL
FRTNPHFFLLLAPHGGHCGFLQKRASSSAASWGNTVALDYLEVLAKFFQA
EEGMGDGLCRRRSVALDHHSQGLRQHGDTSLAALDFQENFCWQRSYTH
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MVLGLLAWWLGRRILSSQGWSRWILEEEVQEPGLRGKGTKWALVGDCRLI
FTPSALALALLKHLGKSAYLEAQRWSWRTWPTLQTAKQLLWPPDQLLEMA
RDHLQVADGGLVALDWVVGPGGGSRKGSVAAGATVLLVVPNAAGKITRNL
CQLCRLALDKGHYPVIFNRRGHNGCPLTSVRLQPFGDPTDLKEAVTYIRF
RHPTAVLFAASEGSGSGLLLSYLGECGSSCDVQGAVCVSPLLKGQDWFEA
GSPWLWEWSLLLYQKTVISRHAKALREVVDMEKVLGSHSLREFEDTLFCC
GKSRPVTWETYWACNEPLRDADDVAVPVLCICSADDPVRGPPSRSLPWEL
FRTNPHFFLLLAPHGGHCGFLQKRASSSAASWGNTVALDYLEVLAKFFQA
EEGMGDGLCRRRSVALDHHSQGLRQHGDTSLAALDFQENFCWQRSYTH


Reference
    Title: Madagascar ground gecko genome analysis characterizes asymmetric fates of duplicated genes
    Hara Y, Takeuchi M, Kageyama Y, Tatsumi K, Hibi M, Kiyonari H, Kuraku S
    Ref: BMC Biol, 16:40, 2018 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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