Gene_Locus Report

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Gene_locus Report for: 9laco-a0a0r2cld6

Lactobacillus florum. Accessory secretory protein Asp2

Comment
Other strains: Lactobacillus florum DSM 22689 = JCM 16035


Relationship
Family|Asp2
Block| X
Position in NCBI Life Tree|Lactobacillus florum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus florum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AYZI01000002, WP_056961370, WP_051393764
1 UniProt : A0A0R2CLD6
2 UniProt : A0A0R2CLD6, W9EN12
2 Interpro : A0A0R2CLD6, W9EN12
2 Pfam : A0A0R2CLD6, W9EN12
2 PIRSF : A0A0R2CLD6, W9EN12
2 SUPERFAM : A0A0R2CLD6, W9EN12
Sequence
Graphical view for this peptide sequence: 9laco-a0a0r2cld6
Colored MSA for Asp2 (raw)
MSLRKQQPTLVIHLTRYGFTDAANILGEDYQYYWSDDRRWQQEIIADQPL
FDDAGKLNKAYQRALFIIDNGFPWLTDRRVIQQLPANQIFFAKQLKISSE
LHDLLSLRGAIEFNKLHPEKLFEMINYYWYSGSDGYRYDPQSWLFNPALV
KTIYQRGNLYREFQVTDQENWDVLTYPNHSFYLPAGLTDTISLDYQVFSG
VQLGLKIKQIDVETGYPLQTIFLTKNEDLNSFEIKGPRKRATQFQVLLYI
RGSGQVRIGELHVRRSRGAYGNMMINDQMLTDQQLHGNIGIYFNAGDLKP
PLNVYFAGYRTKEGYEGNRMMASMGAPYLLISDWRLEGGAFYLGDPAFEH
QLVSIIKKTLQRLQFEPQQLILSGMSMGTFGALYYGAQLNPSGIVVGKPL
TQLGEIAQNGRVKRSTDFRTAEDIQLYYEPDLTEASSQHLNDRFWNVFRA
GKLTQTTLAVAYMLQDDYDQTAFQRLRQAYWQLNPAGRLLAKGFVGRHND
DTAGVVQWFQRQYRFLLQEFGRD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSLRKQQPTLVIHLTRYGFTDAANILGEDYQYYWSDDRRWQQEIIADQPL
FDDAGKLNKAYQRALFIIDNGFPWLTDRRVIQQLPANQIFFAKQLKISSE
LHDLLSLRGAIEFNKLHPEKLFEMINYYWYSGSDGYRYDPQSWLFNPALV
KTIYQRGNLYREFQVTDQENWDVLTYPNHSFYLPAGLTDTISLDYQVFSG
VQLGLKIKQIDVETGYPLQTIFLTKNEDLNSFEIKGPRKRATQFQVLLYI
RGSGQVRIGELHVRRSRGAYGNMMINDQMLTDQQLHGNIGIYFNAGDLKP
PLNVYFAGYRTKEGYEGNRMMASMGAPYLLISDWRLEGGAFYLGDPAFEH
QLVSIIKKTLQRLQFEPQQLILSGMSMGTFGALYYGAQLNPSGIVVGKPL
TQLGEIAQNGRVKRSTDFRTAEDIQLYYEPDLTEASSQHLNDRFWNVFRA
GKLTQTTLAVAYMLQDDYDQTAFQRLRQAYWQLNPAGRLLAKGFVGRHND
DTAGVVQWFQRQYRFLLQEFGRD


Reference
    Title: Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
    Sun Z, Harris HM, McCann A, Guo C, Argimon S, Zhang W, Yang X, Jeffery IB, Cooney JC and O'Toole PW <21 more author(s)>
    Ref: Nat Commun, 6:8322, 2015 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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