Gene_Locus Report

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Gene_locus Report for: 9laco-a0a0r1x2g3

Lactobacillus graminis DSM 20719. Uncharacterized protein

Relationship
Family|Asp2
Block| X
Position in NCBI Life Tree|Lactobacillus graminis DSM 20719
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus graminis: N E > Lactobacillus graminis DSM 20719: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AYZB01000058
Sequence
Graphical view for this peptide sequence: 9laco-a0a0r1x2g3
Colored MSA for Asp2 (raw)
MRYYFQMQSRTKKRKQLKLHYILKKTSAVNAPLIVIFSAFPRTGYEATYN
YLKTLEGIPAHRLYILDRFGAQKRGTYYLANNGDFTLRSMVQELIRDIKI
QVGTQRLICVGSSKGGYAALYYGHLMGAECVIAGAPQYYLGNYLSDQPLK
KPILEGVMGNSCQSSIDFLNHLLPDLITQTPTLKMIYLHYSDQEHTYHEH
IQTLIELLTKKEQPLNLNVAHYNDHQAVRHYFPRYLQTSLLSLQLGTKKK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRYYFQMQSRTKKRKQLKLHYILKKTSAVNAPLIVIFSAFPRTGYEATYN
YLKTLEGIPAHRLYILDRFGAQKRGTYYLANNGDFTLRSMVQELIRDIKI
QVGTQRLICVGSSKGGYAALYYGHLMGAECVIAGAPQYYLGNYLSDQPLK
KPILEGVMGNSCQSSIDFLNHLLPDLITQTPTLKMIYLHYSDQEHTYHEH
IQTLIELLTKKEQPLNLNVAHYNDHQAVRHYFPRYLQTSLLSLQLGTKKK


Reference
    Title: Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
    Sun Z, Harris HM, McCann A, Guo C, Argimon S, Zhang W, Yang X, Jeffery IB, Cooney JC and O'Toole PW <21 more author(s)>
    Ref: Nat Commun, 6:8322, 2015 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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