Gene_Locus Report

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Gene_locus Report for: 9laco-a0a0r1w9r8

Lactobacillus oris. Accessory Sec system protein Asp2

Comment
Other strains: Lactobacillus oris (DSM 4864; PB013-T2-3)


Relationship
Family|Asp2
Block| X
Position in NCBI Life Tree|Lactobacillus oris DSM 4864
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus oris: N E > Lactobacillus oris DSM 4864: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AZGE01000029
1 UniProt : A0A0R1W9R8
2 UniProt : A0A0R1W9R8, E3C8W7
2 Interpro : A0A0R1W9R8, E3C8W7
2 Pfam : A0A0R1W9R8, E3C8W7
2 PIRSF : A0A0R1W9R8, E3C8W7
2 SUPERFAM : A0A0R1W9R8, E3C8W7
Sequence
Graphical view for this peptide sequence: 9laco-a0a0r1w9r8
Colored MSA for Asp2 (raw)
MDKMNVLQLGGDNWADQYQIPSDIKWEFNDYPVKDKKKQHRYDAVIFTSE
PALTGDEWFRLQWLVDPYKVFYLPGVKAAAGKQLRLFLHQQKAAAIEQLP
QDLIADLIPKYYTGQSGLRILPSMLLLNTRNFPGYQYVDGQHMEVDVQAE
QDWQDLGTYKQSLFIDPHHLIKFWLEYQGTGLQIRLRVFIQPNGGDGEIK
DCYYLPVTGEQEMELPIKVASDVRFGCIGLEVRGTGKLRLGVLHSRWSRA
GQGAFLTGGERIVDPVKHEDIAYYFNPGDMRPPLNVYFSGARGLEGFEAY
PLFRNTHAPSLLFTDMRLEIGQFYTGPVIEEQIKKVIRAKLAELGLTNHE
LIMNGISMGTYPAMKLGMQLSAYAINVAKPIANLGHVAERGRLQRPDEFA
TIFDIDAQIAPDLDEQSLRQLDEEFWRLASQTDLTETRLFISVMENDDYD
DRALAGLQKNTAVQKAKQFTYKGFGGRHNDNPASIQWFAQRVAYLTGKEF
KRSNAFNE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MDKMNVLQLGGDNWADQYQIPSDIKWEFNDYPVKDKKKQHRYDAVIFTSE
PALTGDEWFRLQWLVDPYKVFYLPGVKAAAGKQLRLFLHQQKAAAIEQLP
QDLIADLIPKYYTGQSGLRILPSMLLLNTRNFPGYQYVDGQHMEVDVQAE
QDWQDLGTYKQSLFIDPHHLIKFWLEYQGTGLQIRLRVFIQPNGGDGEIK
DCYYLPVTGEQEMELPIKVASDVRFGCIGLEVRGTGKLRLGVLHSRWSRA
GQGAFLTGGERIVDPVKHEDIAYYFNPGDMRPPLNVYFSGARGLEGFEAY
PLFRNTHAPSLLFTDMRLEIGQFYTGPVIEEQIKKVIRAKLAELGLTNHE
LIMNGISMGTYPAMKLGMQLSAYAINVAKPIANLGHVAERGRLQRPDEFA
TIFDIDAQIAPDLDEQSLRQLDEEFWRLASQTDLTETRLFISVMENDDYD
DRALAGLQKNTAVQKAKQFTYKGFGGRHNDNPASIQWFAQRVAYLTGKEF
KRSNAFNE


Reference
    Title: Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
    Sun Z, Harris HM, McCann A, Guo C, Argimon S, Zhang W, Yang X, Jeffery IB, Cooney JC and O'Toole PW <21 more author(s)>
    Ref: Nat Commun, 6:8322, 2015 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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