Gene_Locus Report

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Gene_locus Report for: 9laco-a0a0r1vln2

Lactobacillus ghanensis DSM 18630. Abhydrolase_3 domain-containing protein

Relationship
Family|BD-FAE
Block| H
Position in NCBI Life Tree|Lactobacillus ghanensis DSM 18630
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Liquorilactobacillus: N E > Liquorilactobacillus ghanensis: N E > Liquorilactobacillus ghanensis DSM 18630: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AZGB01000016, WP_057871849.1
1 UniProt : A0A0R1VLN2
1 UniProt : A0A0R1VLN2
1 Interpro : A0A0R1VLN2
1 Pfam : A0A0R1VLN2
1 PIRSF : A0A0R1VLN2
1 SUPERFAM : A0A0R1VLN2
Sequence
Graphical view for this peptide sequence: 9laco-a0a0r1vln2
Colored MSA for BD-FAE (raw)
MVDKQIELAIEQIRTEWKKGDDQRDAGLPLEIPEVKRIDNIVYGPDPKWN
SLDIYLPKNVVGKIPTIINIHGGGWCYGTKETYQFYGLGLAKRGFAFINP
NYRLAPEAVFPAELDDVNCYIHWVAKHAQEYNLDTNNVFLVGDSAGGQMA
EQYAAILKNPTFRAKFGYQLPELKFRAIALNSAAVFVLDPGMIGGAVKGY
FTDEVLKNKRDLLDTEKYITADYLPTYISTATEDFIRDASIKFAGFLAEK
GIKHVFKEYGDKEHPRPHVFLINQKDYIADQANDDEIKFFKQFIVKS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MVDKQIELAIEQIRTEWKKGDDQRDAGLPLEIPEVKRIDNIVYGPDPKWN
SLDIYLPKNVVGKIPTIINIHGGGWCYGTKETYQFYGLGLAKRGFAFINP
NYRLAPEAVFPAELDDVNCYIHWVAKHAQEYNLDTNNVFLVGDSAGGQMA
EQYAAILKNPTFRAKFGYQLPELKFRAIALNSAAVFVLDPGMIGGAVKGY
FTDEVLKNKRDLLDTEKYITADYLPTYISTATEDFIRDASIKFAGFLAEK
GIKHVFKEYGDKEHPRPHVFLINQKDYIADQANDDEIKFFKQFIVKS


Reference
    Title: Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
    Sun Z, Harris HM, McCann A, Guo C, Argimon S, Zhang W, Yang X, Jeffery IB, Cooney JC and O'Toole PW <21 more author(s)>
    Ref: Nat Commun, 6:8322, 2015 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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