Gene_Locus Report

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Gene_locus Report for: 9laco-a0a0r1leq9

Lactobacillus acidifarinae DSM 19394. Accessory secretory protein Asp2

Relationship
Family|Asp2
Block| X
Position in NCBI Life Tree|Lactobacillus acidifarinae DSM 19394
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus acidifarinae: N E > Lactobacillus acidifarinae DSM 19394: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AZDV01000027
1 UniProt : A0A0R1LEQ9
1 UniProt : A0A0R1LEQ9
1 Interpro : A0A0R1LEQ9
1 Pfam : A0A0R1LEQ9
1 PIRSF : A0A0R1LEQ9
1 SUPERFAM : A0A0R1LEQ9
Sequence
Graphical view for this peptide sequence: 9laco-a0a0r1leq9
Colored MSA for Asp2 (raw)
MPNTLRTPAGYLLPFWRNALFLLSFDDPTWHNLEILEALPANHILYDESV
ELNPTVRALFDLKGAFAINMNDAATLTNTINRDWFPGQDSFKLDHGSLRV
LGNFEGTVHRFGRYHLQLTGNFGNAFQPVVIWETQGYAGRNRDLTFQPEF
QASDEVLVRYQLTLVNQTTDQPLHTLTFNPADYPNGKTLHLGDTDYYYTL
SVLAMGQGQLDIGLVHISRGRERFGSLFPGGQFHHIPGSLNENFYSYFDA
GDMQPPLNVYFSGFNMTDHFEGNFMMERFGAPFLLVSDPRLNGGGFYVGS
DAFEQQFVTVIQATLKRLGFAPNDLVLSGISEGTVATFYYGALLKPRAII
AGKPLINLGTMATNGRIKRTQDFQPSFDLLLSHTGDVTPKTAQQLNQRVW
HRFKQGDFSHTTFAVAHMYQDDFDNTTFLELFDWITDEFPHVRFLHKGIL
GRHNDNTPAVNTWFVKQFRMILTSEYGRHFADEEVVSS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPNTLRTPAGYLLPFWRNALFLLSFDDPTWHNLEILEALPANHILYDESV
ELNPTVRALFDLKGAFAINMNDAATLTNTINRDWFPGQDSFKLDHGSLRV
LGNFEGTVHRFGRYHLQLTGNFGNAFQPVVIWETQGYAGRNRDLTFQPEF
QASDEVLVRYQLTLVNQTTDQPLHTLTFNPADYPNGKTLHLGDTDYYYTL
SVLAMGQGQLDIGLVHISRGRERFGSLFPGGQFHHIPGSLNENFYSYFDA
GDMQPPLNVYFSGFNMTDHFEGNFMMERFGAPFLLVSDPRLNGGGFYVGS
DAFEQQFVTVIQATLKRLGFAPNDLVLSGISEGTVATFYYGALLKPRAII
AGKPLINLGTMATNGRIKRTQDFQPSFDLLLSHTGDVTPKTAQQLNQRVW
HRFKQGDFSHTTFAVAHMYQDDFDNTTFLELFDWITDEFPHVRFLHKGIL
GRHNDNTPAVNTWFVKQFRMILTSEYGRHFADEEVVSS


Reference
    Title: Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
    Sun Z, Harris HM, McCann A, Guo C, Argimon S, Zhang W, Yang X, Jeffery IB, Cooney JC and O'Toole PW <21 more author(s)>
    Ref: Nat Commun, 6:8322, 2015 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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