Trichinella murrelli; T. spiralis (Trichina worm); T. sp.; T. patagoniensis; T. britovi; T. pseudospiralis; T. zimbabwensis; T. nativa; T. papuae, Neuroligin
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) > cellular organisms: NE > Eukaryota: NE > Opisthokonta: NE > Metazoa: NE > Eumetazoa: NE > Bilateria: NE > Protostomia: NE > Ecdysozoa: NE > Nematoda: NE > Enoplea: NE > Dorylaimia: NE > Trichinellida: NE > Trichinellidae: NE > Trichinella: NE > Trichinella murrelli: NE
Gliotactin : 9bila-a0a0v0tgw4.2Trichinella murrelli; T. sp.; T. pseudospiralis (Parasitic roundworm); T. patagoniensis; T. spiralis (Trichina worm); T britovi; T. zimbabwensi; T nativa;; T papuae Gliotactin. Neuroligin : 9bila-a0a0v0tgw4.1Trichinella murrelli; T. nelsoni; T. sp., T pseudospiralis T. patagoniensis; T. spiralis (Trichina worm); T britovi; T. zimbabwensi; T nativa; T. papuae, Neuroligin-1
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) Trichinella sp. T9: N, E.
Trichinella spiralis: N, E.
Trichinella sp. T6: N, E.
Trichinella patagoniensis: N, E.
Trichinella britovi: N, E.
Trichinella pseudospiralis: N, E.
Trichinella zimbabwensis: N, E.
Trichinella nativa: N, E.
Trichinella papuae: N, E.
Trichinella sp. T8: N, E.
LegendThis sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA MKFLFTFFEPVHHVFIWYSSTILGTLFLITVAQPTDQDHLNLVRRHTSYG DVLGFVHHGKLASAECYLGIPYARPPINDRRFAYPEPVDHWINLYNATYF RPWCVQFWYSDVYLEKREQSEDCLYLNIFVPRKTVHAKPYPVLVWIHGGS YQVGGSQLFPINGTVDNIVSHGVIFVSINYRLGPLGFLTNMRSGLFGNYG LEDQIVALQWIKDTIGLFDGDPNRITVGGESSGAASVSILATSPRTIGLF QRAVIRSGSAMSPWAIQSTNTDLNSAKLMEVTNCSFNDDKKTMECLRTLS ISQMKNIWKLLADDGMKLIYSKSDSKSTNYNHPFLAHTYFTPVVDKYREN QSIIPLPAERLIRENARLPLMIGSTTGECIAYVSWLAYLAENDRIDLCNI EFVAPSFRFKNAEQVKQAIYQHYFDNRPIQHDTNLSHILVKIVTDQNIKV PMMKEISYYTNKNVPIFVYSFDYSDDKLQNMHLSFAMRDQGAAHGFDLVY LFQSMSVLDPRNITVEWASKDLNITYFIASTMTNFVKFGNPNFQTESNKL QFHWPPFDFPSSQQMYIGSQIKPIKVPFELLYFWNRTIEIIQTLSLQHDF IFEPPTVSNFHCGVFEDYELLNYRVAFFTVLTLSLAMLFLLGFCCFLHRN QEKNIPTVVE
Genome evolution studies for the phylum Nematoda have been limited by focusing on comparisons involving Caenorhabditis elegans. We report a draft genome sequence of Trichinella spiralis, a food-borne zoonotic parasite, which is the most common cause of human trichinellosis. This parasitic nematode is an extant member of a clade that diverged early in the evolution of the phylum, enabling identification of archetypical genes and molecular signatures exclusive to nematodes. We sequenced the 64-Mb nuclear genome, which is estimated to contain 15,808 protein-coding genes, at approximately 35-fold coverage using whole-genome shotgun and hierarchal map-assisted sequencing. Comparative genome analyses support intrachromosomal rearrangements across the phylum, disproportionate numbers of protein family deaths over births in parasitic compared to a non-parasitic nematode and a preponderance of gene-loss and -gain events in nematodes relative to Drosophila melanogaster. This genome sequence and the identified pan-phylum characteristics will contribute to genome evolution studies of Nematoda as well as strategies to combat global parasites of humans, food animals and crops.
