Gene_Locus Report

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Gene_locus Report for: 9bact-d1nbg1

Victivallis vadensis ATCC BAA-548 Acetyl xylan esterase

Comment
only c-term Pfam A AXE1 258 462 and 472 546 Other strains: Victivallis vadensis ATCC BAA-548


Relationship
Family|Acetyl-esterase_deacetylase
Block| X
Position in NCBI Life Tree|Victivallis vadensis ATCC BAA-548
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > PVC group: N E > Lentisphaerae: N E > Lentisphaeria: N E > Victivallales: N E > Victivallaceae: N E > Victivallis: N E > Victivallis vadensis: N E > Victivallis vadensis ATCC BAA-548: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : WP_116883777, PVY42587
1 UniProt : A0A2U1B235
1 UniProt : A0A2U1B235
1 Interpro : A0A2U1B235
1 Pfam : A0A2U1B235
1 PIRSF : A0A2U1B235
1 SUPERFAM : A0A2U1B235
Sequence
Graphical view for this peptide sequence: 9bact-d1nbg1
Colored MSA for Acetyl-esterase_deacetylase (raw)
YGLGGGVAADTLKPGEPEPEDFDAYWVRQKRALAAVPLKVLEKKFVRESK
HCLIYDLKIACAGRRPVSGYLAVPRTAKPKSLPLRIFYQGYGIAGAAEQE
NPDELTFSVNPHGIENGREQAYYIALANGELRSYGFSDRENARPESSYFN
GTILRDLRALEFCRTLPEWDGETIHLSGGSQGAFQTVAVAALSDGISSCS
LEVPWLCDLGGVNIGRIRGWRPNLRPGLGYFDTVNFAGRVKAPVTIRAGL
SDWVCPPSGVWVLYNSLKAPARLTMYQGRDHAVYPAFDERQTPQTTYCK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

YGLGGGVAADTLKPGEPEPEDFDAYWVRQKRALAAVPLKVLEKKFVRESK
HCLIYDLKIACAGRRPVSGYLAVPRTAKPKSLPLRIFYQGYGIAGAAEQE
NPDELTFSVNPHGIENGREQAYYIALANGELRSYGFSDRENARPESSYFN
GTILRDLRALEFCRTLPEWDGETIHLSGGSQGAFQTVAVAALSDGISSCS
LEVPWLCDLGGVNIGRIRGWRPNLRPGLGYFDTVNFAGRVKAPVTIRAGL
SDWVCPPSGVWVLYNSLKAPARLTMYQGRDHAVYPAFDERQTPQTTYCK


Reference
    Title: Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract
    van Passel MW, Kant R, Palva A, Lucas S, Copeland A, Lapidus A, Glavina Del Rio T, Dalin E, Tice H and Zoetendal EG <16 more author(s)>
    Ref: Journal of Bacteriology, 193:2373, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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