Gene_Locus Report

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Gene_locus Report for: 9bact-a0a143pl79

Acidobacteria bacterium DSM 100886. Type IV secretory pathway, VirJ component

Relationship
Family|VirJ
Block| X
Position in NCBI Life Tree|Acidobacteria bacterium DSM 100886
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Acidobacteria: N E > unclassified Acidobacteria: N E > Acidobacteria subdivision 6: N E > Luteitalea: N E > Luteitalea pratensis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP015136
1 UniProt : A0A143PL79
1 UniProt : A0A143PL79
1 Interpro : A0A143PL79
1 Pfam : A0A143PL79
1 PIRSF : A0A143PL79
1 SUPERFAM : A0A143PL79
Sequence
Graphical view for this peptide sequence: 9bact-a0a143pl79
Colored MSA for VirJ (raw)
MSTNPLCTLGSALRVATLALLILASSAAAQVTQVVSLRGHVQTLRVYGTP
GHTPIIVSSGDGGWLHLAPHVAALLASKGYFVIGFDARGYLESFTTGGTT
LRPTDAPVDFRTLAALASGGTERKPVLVGVSEGAGLSLLAATDPVTRQAV
AGVIALGLPDVNELGWRWKDALSYLTHATPAEPTFSTAAIASRLAPAPLA
AIHSTHDEFVPLPEVQRILAAAREPKRLWIVPAADHRFSDNLAELDTRLL
EALAWVRQQGP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSTNPLCTLGSALRVATLALLILASSAAAQVTQVVSLRGHVQTLRVYGTP
GHTPIIVSSGDGGWLHLAPHVAALLASKGYFVIGFDARGYLESFTTGGTT
LRPTDAPVDFRTLAALASGGTERKPVLVGVSEGAGLSLLAATDPVTRQAV
AGVIALGLPDVNELGWRWKDALSYLTHATPAEPTFSTAAIASRLAPAPLA
AIHSTHDEFVPLPEVQRILAAAREPKRLWIVPAADHRFSDNLAELDTRLL
EALAWVRQQGP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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